Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110230843 . G A CCDS809.1:NM_000561.3:c.88Gaa>Aaa_NP_000552.2:p.30E>K Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 GLU A:30 A:29 50.0 0.263 E -130.8 123.8 50.0 0.263 0.0 HOH
 2.768
 OE2
 O
GLU B:30 B:29 50.0 0.263 E -130.7 121.0 50.0 0.263 0.0 HOH
 2.735
 O
 O
GLU C:30 C:29 50.0 0.263 E -130.0 121.3 NA NA NA
GLU D:30 D:29 52.0 0.274 E -131.4 122.7 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 GLU A:30 A:29 45.0 0.237 E -147.4 135.7 45.0 0.237 0.0 HOH
 2.636
 OE1
 O
GLU B:30 B:29 45.0 0.237 E -141.0 132.8 NA NA NA
GLU C:30 C:29 46.0 0.242 E -137.9 130.2 46.0 0.242 0.0 HOH
 2.797
 OE2
 O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 GLU A:30 A:29 49.0 0.258 E -143.1 132.8 49.0 0.258 0.0 HOH
 3.243
 N
 O
GLU B:30 B:29 46.0 0.242 E -143.6 130.0 46.0 0.242 0.0 HOH
 6.645
 OE1
 O
GLU C:30 C:29 49.0 0.258 E -145.8 129.5 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 GLU A:30 A:29 45.0 0.237 E -102.8 134.7 45.0 0.237 0.0
GLU B:30 B:29 45.0 0.237 E -101.6 135.6 45.0 0.237 0.0 HOH
 6.702
 OE2
 O
GLU C:30 C:29 45.0 0.237 E -94.3 134.2 NA NA NA
GLU D:30 D:29 47.0 0.247 E -96.7 133.8 NA NA NA
GLU E:30 E:29 42.0 0.221 E -103.7 134.3 NA NA NA
GLU F:30 F:29 43.0 0.226 E -105.3 134.9 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 GLU A:30 A:29 53.0 0.279 E -110.4 131.3 53.0 0.279 0.0 HOH
 2.606
 OE2
 O
GLU B:30 B:29 54.0 0.284 E -108.7 133.1 NA NA NA
GLU C:30 C:29 51.0 0.268 E -108.1 131.9 NA NA NA
GLU D:30 D:29 49.0 0.258 E -109.6 132.8 49.0 0.258 0.0 HOH
 2.614
 OE2
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 GLU A:29 A:29 50.0 0.263 E -121.4 137.4 50.0 0.263 0.0 HOH
 6.799
 OE2
 O
GLU B:29 B:29 48.0 0.253 E -126.9 136.5 48.0 0.253 0.0 HOH
 3.068
 OE2
 O
GLU C:29 C:29 50.0 0.263 E -117.7 129.0 NA NA NA
GLU D:29 D:29 47.0 0.247 E -123.3 135.3 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 GLU A:29 A:29 61.0 0.321 E -100.6 125.8 61.0 0.321 0.0
GLU B:29 B:29 67.0 0.353 E -90.2 117.1 67.0 0.353 0.0
GLU C:29 C:29 67.0 0.353 E -131.9 131.0 NA NA NA
GLU D:29 D:29 51.0 0.268 E -101.1 122.2 NA NA NA
GLU E:29 E:29 64.0 0.337 E -130.3 106.1 NA NA NA
GLU F:29 F:29 60.0 0.316 E -91.1 134.4 NA NA NA
GLU G:29 G:29 51.0 0.268 E -90.7 118.2 NA NA NA
GLU H:29 H:29 65.0 0.342 E -96.3 117.1 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 GLU A:30 A:30 39.0 0.205 E -108.3 131.4 39.0 0.205 0.0 HOH
 2.699
 OE2
 O
GLU B:30 B:30 46.0 0.242 E -115.3 138.2 46.0 0.242 0.0 HOH
 2.611
 OE2
 O
GLU C:30 C:30 41.0 0.216 E -117.7 134.7 NA NA NA
GLU D:30 D:30 46.0 0.242 E -111.7 140.9 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 GLU A:29 A:29 43.0 0.226 E -115.5 137.7 43.0 0.226 0.0 HOH
 2.641
 OE2
 O
GLU B:29 B:29 46.0 0.242 E -113.2 135.1 46.0 0.242 0.0 HOH
 2.626
 OE2
 O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 GLU A:29 A:29 45.0 0.237 E -131.1 134.3 45.0 0.237 0.0 HOH
 2.648
 O
 O
GLU B:29 B:29 46.0 0.242 E -112.4 147.8 46.0 0.242 0.0 HOH
 2.722
 OE2
 O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 GLU A:29 A:29 42.0 0.221 E -102.0 128.9 42.0 0.221 0.0 HOH
 2.652
 OE2
 O
GLU B:29 B:29 43.0 0.226 E -104.1 129.2 43.0 0.226 0.0 HOH
 2.659
 OE1
 O
GLU C:29 C:29 40.0 0.211 E -101.7 128.4 NA NA NA
GLU D:29 D:29 42.0 0.221 E -103.3 130.6 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 GLU A:29 A:29 51.0 0.268 E -112.4 119.6 51.0 0.268 0.0 HOH
 2.659
 OE2
 O
GLU B:29 B:29 50.0 0.263 E -110.9 123.9 50.0 0.263 0.0 HOH
 3.028
 OE1
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 GLU A:29 A:29 53.0 0.279 E -109.9 142.6 53.0 0.279 0.0
GLU C:29 C:29 56.0 0.295 E -104.5 146.5 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 GLU A:29 A:29 43.0 0.226 E -127.8 127.8 43.0 0.226 0.0 HOH
 2.502
 OE1
 O
GLU B:29 B:29 51.0 0.268 E -124.8 125.8 51.0 0.268 0.0 HOH
 2.758
 OE2
 O
GLU C:29 C:29 53.0 0.279 E -124.4 133.2 NA NA NA
GLU D:29 D:29 46.0 0.242 E -116.5 142.8 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 GLU A:29 A:29 69.0 0.363 E -108.4 138.5 69.0 0.363 0.0 HOH
 2.550
 OE2
 O
GLU B:29 B:29 62.0 0.326 E -107.2 138.6 62.0 0.326 0.0 HOH
 2.652
 OE2
 O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLU A:29 A:29 56.0 0.295 E -111.0 130.3 56.0 0.295 0.0 HOH
 2.801
 OE2
 O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLU A:29 A:29 69.0 0.363 E -112.5 107.0 69.0 0.363 0.0
GLU B:29 B:29 63.0 0.332 -83.0 105.4 63.0 0.332 0.0
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 GLU A:29 A:29 58.0 0.305 E -111.6 113.1 58.0 0.305 0.0
GLU B:29 B:29 74.0 0.389 E -78.6 127.1 74.0 0.389 0.0
GLU C:29 C:29 61.0 0.321 E -131.0 144.7 NA NA NA
GLU D:29 D:29 58.0 0.305 E -127.9 142.6 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 GLU A:37 A:37 38.0 0.2 E -128.2 159.5 38.0 0.2 0.0 HOH
 2.595
 OE2
 O
GLU B:37 B:37 39.0 0.205 E -128.0 162.0 39.0 0.205 0.0 HOH
 2.672
 OE2
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 GLU A:29 A:29 47.0 0.247 E -112.1 136.3 47.0 0.247 0.0 GPS
HOH
 3.403
2.692
 N
OE1
 O5
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 GLU A:30 A:30 47.0 0.247 E -110.4 125.0
af-q03013-f1 1 Q03013 86.7 3e-145 GLU A:30 A:30 47.0 0.247 E -110.3 126.2
af-p46439-f1 1 P46439 87.61 6e-142 GLU A:30 A:30 47.0 0.247 E -104.2 130.1
af-p28161-f1 1 P28161 84.4 3e-141 GLU A:30 A:30 42.0 0.221 E -113.1 126.5