Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110231736 . C A CCDS809.1:NM_000561.3:c.244Cgc>Agc_NP_000552.2:p.82R>S Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ARG A:82 A:81 150.0 0.667 H -60.1 -35.1 48.0 0.213 0.454 B:P09488:0.453
 HOH
 2.639
 O
 O
ARG B:82 B:81 161.0 0.716 H -63.0 -35.0 52.0 0.231 0.485 A:P09488:0.484
 HOH
 3.153
 NH1
 O
ARG C:82 C:81 156.0 0.693 H -63.1 -34.2 NA NA NA
ARG D:82 D:81 158.0 0.702 H -63.0 -35.8 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ARG A:82 A:81 149.0 0.662 H -59.7 -32.6 46.0 0.204 0.458 C:P09488:0.458
 HOH
 3.447
 NH1
 O
ARG B:82 B:81 150.0 0.667 H -58.1 -29.4 NA NA NA
ARG C:82 C:81 147.0 0.653 H -63.4 -36.0 49.0 0.218 0.435 A:P09488:0.436
 HOH
 3.015
 O
 O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 ARG A:82 A:81 151.0 0.671 H -56.7 -36.7 50.0 0.222 0.449 B:P09488:0.449
 HOH
 4.049
 CA
 O
ARG B:82 B:81 147.0 0.653 H -60.1 -33.5 47.0 0.209 0.444 A:P09488:0.444
 HOH
 6.339
 NH1
 O
ARG C:82 C:81 150.0 0.667 H -56.9 -31.2 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 ARG A:82 A:81 152.0 0.676 H -65.9 -41.7 49.0 0.218 0.458 B:P09488:0.458
 HOH
 7.010
 NH1
 O
ARG B:82 B:81 154.0 0.684 H -62.6 -43.5 48.0 0.213 0.471 A:P09488:0.471
 HOH
 6.189
 NH1
 O
ARG C:82 C:81 148.0 0.658 H -66.4 -42.8 NA NA NA
ARG D:82 D:81 149.0 0.662 H -67.1 -43.0 NA NA NA
ARG E:82 E:81 150.0 0.667 H -67.2 -43.0 NA NA NA
ARG F:82 F:81 151.0 0.671 H -66.1 -43.9 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 ARG A:82 A:81 150.0 0.667 H -62.0 -32.5 47.0 0.209 0.458 D:P09488:0.458
 NA
HOH
 3.218
2.948
 NH1
NH2
 NA
O
ARG B:82 B:81 162.0 0.72 H -67.8 -26.5 NA NA NA
ARG C:82 C:81 154.0 0.684 H -62.9 -32.8 NA NA NA
ARG D:82 D:81 163.0 0.724 H -59.6 -29.7 57.0 0.253 0.471 A:P09488:0.471
 NA
HOH
 8.627
2.987
 NH1
NH2
 NA
O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 ARG A:81 A:81 165.0 0.733 H -59.6 -33.7 59.0 0.262 0.471 B:P09488:0.471
 HOH
 2.784
 NH2
 O
ARG B:81 B:81 163.0 0.724 H -57.5 -41.4 57.0 0.253 0.471 A:P09488:0.471
 HOH
 2.964
 NH2
 O
ARG C:81 C:81 157.0 0.698 H -59.8 -35.2 NA NA NA
ARG D:81 D:81 157.0 0.698 H -59.8 -37.5 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 ARG A:81 A:81 155.0 0.689 H -42.5 -60.3 43.0 0.191 0.498 B:Q03013:0.498
ARG B:81 B:81 152.0 0.676 H -53.3 -52.9 52.0 0.231 0.445 A:Q03013:0.444
ARG C:81 C:81 158.0 0.702 H -50.5 -57.2 NA NA NA
ARG D:81 D:81 128.0 0.569 H -71.2 -31.0 NA NA NA
ARG E:81 E:81 146.0 0.649 H -66.8 -29.2 NA NA NA
ARG F:81 F:81 153.0 0.68 H -59.4 -49.6 NA NA NA
ARG G:81 G:81 158.0 0.702 H -53.5 -40.7 NA NA NA
ARG H:81 H:81 149.0 0.662 H -58.9 -51.6 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 ARG A:82 A:82 157.0 0.698 H -61.3 -38.5 50.0 0.222 0.476 B:P28161:0.476
 HOH
 2.901
 NH2
 O
ARG B:82 B:82 149.0 0.662 H -63.6 -40.6 41.0 0.182 0.48 A:P28161:0.48
 HOH
 2.669
 O
 O
ARG C:82 C:82 155.0 0.689 H -63.1 -35.5 NA NA NA
ARG D:82 D:82 146.0 0.649 H -62.5 -39.5 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 ARG A:81 A:81 159.0 0.707 H -60.2 -25.3 52.0 0.231 0.476 B:P28161:0.476
 HOH
 2.948
 NH2
 O
ARG B:81 B:81 155.0 0.689 H -62.8 -28.0 51.0 0.227 0.462 A:P28161:0.462
 HOH
 2.718
 NH2
 O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 ARG A:81 A:81 152.0 0.676 H -63.6 -35.7 49.0 0.218 0.458 B:P28161:0.458
 HOH
 2.863
 NH2
 O
ARG B:81 B:81 153.0 0.68 H -62.4 -35.1 48.0 0.213 0.467 A:P28161:0.467
 HOH
 2.619
 O
 O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 ARG A:81 A:81 157.0 0.698 H -69.9 -31.2 46.0 0.204 0.494 B:P28161:0.493
 HOH
 8.922
 NH1
 O
ARG B:81 B:81 153.0 0.68 H -65.1 -35.2 43.0 0.191 0.489 A:P28161:0.489
 HOH
 2.595
 NH1
 O
ARG C:81 C:81 155.0 0.689 H -68.8 -33.9 NA NA NA
ARG D:81 D:81 154.0 0.684 H -70.0 -33.1 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 ARG A:81 A:81 148.0 0.658 H -60.4 -41.5 40.0 0.178 0.48 B:P28161:0.48
 HOH
 3.673
 NE
 O
ARG B:81 B:81 152.0 0.676 H -63.0 -40.2 47.0 0.209 0.467 A:P28161:0.467
 HOH
 2.897
 NE
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 ARG A:81 A:81 158.0 0.702 H -62.8 -41.4 52.0 0.231 0.471 B:P21266:0.471
 HOH
 2.642
 NH2
 O
ARG C:81 C:81 159.0 0.707 H -61.0 -44.0 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 ARG A:81 A:81 149.0 0.662 H -61.7 -37.9 41.0 0.182 0.48 B:P28161:0.48
 HOH
 2.892
 NH1
 O
ARG B:81 B:81 157.0 0.698 H -67.2 -30.2 49.0 0.218 0.48 A:P28161:0.48
 HOH
 2.754
 NH2
 O
ARG C:81 C:81 157.0 0.698 H -66.4 -30.8 NA NA NA
ARG D:81 D:81 155.0 0.689 H -65.2 -36.4 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 ARG A:81 A:81 154.0 0.684 H -60.4 -31.3 51.0 0.227 0.457 B:P28161:0.458
 HOH
 2.770
 NH2
 O
ARG B:81 B:81 153.0 0.68 H -63.0 -33.9 50.0 0.222 0.458 A:P28161:0.458
 HOH
 2.792
 NH2
 O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:81 A:81 154.0 0.684 H -58.2 -37.7 57.0 0.253 0.431 A:P28161:0.431
 HOH
 3.100
 NH1
 O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:81 A:81 156.0 0.693 H -53.9 -43.7 54.0 0.24 0.453 B:P28161:0.453
ARG B:81 B:81 155.0 0.689 H -81.8 -32.2 61.0 0.271 0.418 A:P28161:0.418
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:81 A:81 154.0 0.684 H -60.7 -47.6 56.0 0.249 0.435 B:P28161:0.436
ARG B:81 B:81 142.0 0.631 H -56.1 -53.9 49.0 0.218 0.413 A:P28161:0.413
ARG C:81 C:81 161.0 0.716 H -53.6 -36.6 NA NA NA
ARG D:81 D:81 151.0 0.671 H -59.3 -50.1 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 ARG A:89 A:89 155.0 0.689 H -63.6 -33.6 56.0 0.249 0.44 B:30354091:0.44
 HOH
 2.824
 O
 O
ARG B:89 B:89 162.0 0.72 H -64.6 -35.9 60.0 0.267 0.453 A:30354091:0.453
 HOH
 2.808
 O
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 ARG A:81 A:81 157.0 0.698 H -62.6 -43.7 49.0 0.218 0.48 A:P08010:0.48
 HOH
 3.078
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 ARG A:82 A:82 148.0 0.658 H -63.2 -34.4
af-q03013-f1 1 Q03013 86.7 3e-145 ARG A:82 A:82 152.0 0.676 H -63.0 -33.8
af-p46439-f1 1 P46439 87.61 6e-142 ARG A:82 A:82 148.0 0.658 H -63.4 -34.1
af-p28161-f1 1 P28161 84.4 3e-141 ARG A:82 A:82 149.0 0.662 H -61.3 -36.3