Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110231746 . A C CCDS809.1:NM_000561.3:c.254aAc>aCc_NP_000552.2:p.85N>T Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ASN A:85 A:84 133.0 0.831 T 45.9 50.7 133.0 0.831 0.0 HOH
 2.927
 O
 O
ASN B:85 B:84 86.0 0.537 T 44.9 51.0 86.0 0.537 0.0 HOH
 3.999
 OD1
 O
ASN C:85 C:84 83.0 0.519 T 46.4 51.3 NA NA NA
ASN D:85 D:84 98.0 0.613 T 48.4 49.7 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ASN A:85 A:84 118.0 0.738 T 49.3 50.4 118.0 0.738 0.0 HOH
 3.274
 OD1
 O
ASN B:85 B:84 119.0 0.744 T 52.5 52.1 NA NA NA
ASN C:85 C:84 111.0 0.694 T 55.3 47.4 111.0 0.694 0.0 HOH
 3.336
 OD1
 O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 ASN A:85 A:84 107.0 0.669 T 48.2 53.8 107.0 0.669 0.0 HOH
 3.386
 CA
 O
ASN B:85 B:84 120.0 0.75 T 48.9 52.2 120.0 0.75 0.0
ASN C:85 C:84 119.0 0.744 T 49.8 53.3 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 ASN A:85 A:84 115.0 0.719 T 52.4 58.9 115.0 0.719 0.0 HOH
 2.793
 O
 O
ASN B:85 B:84 115.0 0.719 T 52.4 57.0 115.0 0.719 0.0 HOH
 8.831
 O
 O
ASN C:85 C:84 113.0 0.706 T 51.4 60.0 NA NA NA
ASN D:85 D:84 113.0 0.706 T 54.0 56.1 NA NA NA
ASN E:85 E:84 114.0 0.713 T 52.8 56.4 NA NA NA
ASN F:85 F:84 114.0 0.713 T 53.0 55.9 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 ASN A:85 A:84 123.0 0.769 T 52.2 50.5 123.0 0.769 0.0 NA
HOH
 8.746
2.862
 C
O
 NA
O
ASN B:85 B:84 107.0 0.669 T 53.0 54.3 NA NA NA
ASN C:85 C:84 126.0 0.787 T 53.8 48.8 NA NA NA
ASN D:85 D:84 94.0 0.588 T 50.3 54.5 94.0 0.588 0.0 HOH
 2.380
 ND2
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 ASN A:84 A:84 104.0 0.65 T 63.3 33.0 104.0 0.65 0.0
ASN B:84 B:84 101.0 0.631 T 60.1 36.7 101.0 0.631 0.0
ASN C:84 C:84 101.0 0.631 T 56.7 41.6 NA NA NA
ASN D:84 D:84 99.0 0.619 T 64.5 39.4 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 ASN A:84 A:84 107.0 0.669 T 41.1 44.0 107.0 0.669 0.0
ASN B:84 B:84 119.0 0.744 T 69.0 20.5 119.0 0.744 0.0
ASN C:84 C:84 103.0 0.644 T 46.2 31.1 NA NA NA
ASN D:84 D:84 126.0 0.787 T 46.2 35.4 NA NA NA
ASN E:84 E:84 96.0 0.6 T 60.7 10.3 NA NA NA
ASN F:84 F:84 111.0 0.694 T 56.7 17.4 NA NA NA
ASN G:84 G:84 99.0 0.619 T 47.5 37.7 NA NA NA
ASN H:84 H:84 115.0 0.719 T 50.0 23.9 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 ASN A:85 A:85 109.0 0.681 T 56.5 42.7 109.0 0.681 0.0 HOH
 2.614
 OD1
 O
ASN B:85 B:85 127.0 0.794 T 56.2 44.9 127.0 0.794 0.0 HOH
 2.982
 O
 O
ASN C:85 C:85 107.0 0.669 T 54.0 47.0 NA NA NA
ASN D:85 D:85 126.0 0.787 T 51.9 48.0 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 ASN A:84 A:84 102.0 0.637 T 56.3 47.0 102.0 0.637 0.0 HOH
 2.611
 ND2
 O
ASN B:84 B:84 102.0 0.637 T 54.3 42.9 102.0 0.637 0.0 HOH
 2.731
 ND2
 O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 ASN A:84 A:84 100.0 0.625 T 52.4 46.5 100.0 0.625 0.0 HOH
 3.391
 ND2
 O
ASN B:84 B:84 106.0 0.662 T 49.7 38.3 106.0 0.662 0.0 HOH
 2.643
 ND2
 O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 ASN A:84 A:84 102.0 0.637 T 49.5 57.3 102.0 0.637 0.0 HOH
 8.950
 C
 O
ASN B:84 B:84 102.0 0.637 T 47.0 58.6 102.0 0.637 0.0 HOH
 8.344
 N
 O
ASN C:84 C:84 104.0 0.65 T 46.6 55.1 NA NA NA
ASN D:84 D:84 101.0 0.631 T 49.2 53.8 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 ASN A:84 A:84 127.0 0.794 T 58.9 39.3 127.0 0.794 0.0 HOH
 8.302
 O
 O
ASN B:84 B:84 132.0 0.825 T 62.6 38.5 132.0 0.825 0.0 HOH
 8.407
 O
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 ASN A:84 A:84 112.0 0.7 T 60.8 23.1 112.0 0.7 0.0
ASN C:84 C:84 113.0 0.706 T 61.0 26.8 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 ASN A:84 A:84 151.0 0.944 T 49.4 46.8 151.0 0.944 0.0 HOH
 3.370
 C
 O
ASN B:84 B:84 111.0 0.694 T 53.3 46.1 111.0 0.694 0.0 HOH
 3.158
 C
 O
ASN C:84 C:84 102.0 0.637 T 66.8 31.5 NA NA NA
ASN D:84 D:84 108.0 0.675 T 53.1 43.7 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 ASN A:84 A:84 142.0 0.887 T 55.9 43.1 142.0 0.887 0.0 HOH
 4.016
 O
 O
ASN B:84 B:84 89.0 0.556 T 48.1 46.9 89.0 0.556 0.0 HOH
 4.432
 O
 O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASN A:84 A:84 140.0 0.875 T 56.9 37.8 140.0 0.875 0.0 HOH
 3.207
 O
 O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASN A:84 A:84 99.0 0.619 T 44.5 43.6 99.0 0.619 0.0
ASN B:84 B:84 108.0 0.675 T 62.9 21.1 108.0 0.675 0.0
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASN A:84 A:84 130.0 0.812 T 59.2 19.9 130.0 0.812 0.0
ASN B:84 B:84 111.0 0.694 T 60.4 32.5 111.0 0.694 0.0
ASN C:84 C:84 111.0 0.694 T 61.8 17.7 NA NA NA
ASN D:84 D:84 102.0 0.637 T 29.5 68.3 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 ASN A:92 A:92 88.0 0.55 T 55.4 47.6 88.0 0.55 0.0 HOH
 2.810
 O
 O
ASN B:92 B:92 86.0 0.537 T 55.1 50.3 86.0 0.537 0.0 HOH
 2.724
 O
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 HIS A:84 A:84 149.0 0.764 T 57.9 46.1 149.0 0.764 0.0 HOH
 2.985
 CD2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 ASN A:85 A:85 137.0 0.856 T 55.7 43.3
af-q03013-f1 1 Q03013 86.7 3e-145 ASN A:85 A:85 136.0 0.85 T 56.1 42.8
af-p46439-f1 1 P46439 87.61 6e-142 ASN A:85 A:85 134.0 0.838 T 56.0 41.7
af-p28161-f1 1 P28161 84.4 3e-141 ASN A:85 A:85 121.0 0.756 T 52.7 42.7