Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 110232983 | . | A | C | CCDS809.1:NM_000561.3:c.451Aac>Cac_NP_000552.2:p.151N>H | Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1xw6 | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2004-12-21 | ASN | A:151 | A:150 | 132.0 | 0.825 | S | -93.2 | -16.8 | 132.0 | 0.825 | 0.0 |
HOH |
2.923 |
N |
O |
||
ASN | B:151 | B:150 | 137.0 | 0.856 | S | -91.9 | -17.6 | 137.0 | 0.856 | 0.0 |
HOH |
2.888 |
N |
O |
|||||||||
ASN | C:151 | C:150 | 132.0 | 0.825 | S | -93.1 | -18.1 | NA | NA | NA | |||||||||||||
ASN | D:151 | D:150 | 137.0 | 0.856 | S | -90.0 | -17.6 | NA | NA | NA | |||||||||||||
1xwk | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2004-12-21 | ASN | A:151 | A:150 | 136.0 | 0.85 | S | -85.1 | -18.4 | 136.0 | 0.85 | 0.0 |
HOH |
7.391 |
OD1 |
O |
||
ASN | B:151 | B:150 | 137.0 | 0.856 | S | -83.1 | -19.0 | NA | NA | NA | |||||||||||||
ASN | C:151 | C:150 | 139.0 | 0.869 | S | -83.5 | -19.1 | 139.0 | 0.869 | 0.0 |
HOH |
2.668 |
OD1 |
O |
|||||||||
1yj6 | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2005-02-01 | ASN | A:151 | A:150 | 141.0 | 0.881 | S | -83.9 | -21.0 | 141.0 | 0.881 | 0.0 |
HOH |
3.229 |
N |
O |
||
ASN | B:151 | B:150 | 139.0 | 0.869 | S | -83.5 | -23.1 | 139.0 | 0.869 | 0.0 |
HOH |
9.053 |
ND2 |
O |
|||||||||
ASN | C:151 | C:150 | 144.0 | 0.9 | S | -83.0 | -21.9 | NA | NA | NA | |||||||||||||
2f3m | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2006-04-25 | ASN | A:151 | A:150 | 135.0 | 0.844 | S | -90.3 | -21.3 | 135.0 | 0.844 | 0.0 |
HOH |
8.072 |
C |
O |
||
ASN | B:151 | B:150 | 134.0 | 0.838 | S | -92.9 | -20.1 | 134.0 | 0.838 | 0.0 |
HOH |
5.773 |
N |
O |
|||||||||
ASN | C:151 | C:150 | 135.0 | 0.844 | S | -92.5 | -19.6 | NA | NA | NA | |||||||||||||
ASN | D:151 | D:150 | 134.0 | 0.838 | S | -91.6 | -21.1 | NA | NA | NA | |||||||||||||
ASN | E:151 | E:150 | 135.0 | 0.844 | S | -91.4 | -21.3 | NA | NA | NA | |||||||||||||
ASN | F:151 | F:150 | 133.0 | 0.831 | S | -95.0 | -19.5 | NA | NA | NA | |||||||||||||
7beu | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2022-01-12 | ASN | A:151 | A:150 | 116.0 | 0.725 | S | -89.1 | -6.7 | 116.0 | 0.725 | 0.0 |
HOH |
2.758 |
O |
O |
||
ASN | B:151 | B:150 | 135.0 | 0.844 | S | -81.2 | -11.7 | NA | NA | NA | |||||||||||||
ASN | C:151 | C:150 | 137.0 | 0.856 | S | -72.1 | -17.3 | NA | NA | NA | |||||||||||||
ASN | D:151 | D:150 | 138.0 | 0.863 | S | -81.3 | -12.3 | 138.0 | 0.863 | 0.0 |
HOH |
2.111 |
ND2 |
O |
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1gtu | 1 | P09488 | 100.0 | 2e-163 |
X-RAY |
1999-02-02 | ASN | A:150 | A:150 | 133.0 | 0.831 | S | -95.2 | -0.8 | 133.0 | 0.831 | 0.0 | ||||||
ASN | B:150 | B:150 | 132.0 | 0.825 | S | -88.2 | -9.8 | 132.0 | 0.825 | 0.0 | |||||||||||||
ASN | C:150 | C:150 | 133.0 | 0.831 | S | -92.8 | -14.8 | NA | NA | NA | |||||||||||||
ASN | D:150 | D:150 | 131.0 | 0.819 | S | -84.0 | -16.2 | NA | NA | NA | |||||||||||||
4gtu | 1 | Q03013 | 87.04 | 3e-144 |
X-RAY |
2000-01-14 | ASP | A:150 | A:150 | 152.0 | 1.0 | S | -80.6 | -25.9 | 152.0 | 1.0 | 0.0 | ||||||
ASP | B:150 | B:150 | 139.0 | 0.927 | S | -88.3 | -8.0 | 139.0 | 0.927 | 0.0 | |||||||||||||
ASP | C:150 | C:150 | 135.0 | 0.9 | S | -91.9 | -3.8 | NA | NA | NA | |||||||||||||
ASP | D:150 | D:150 | 148.0 | 0.987 | S | -85.4 | -2.9 | NA | NA | NA | |||||||||||||
ASP | E:150 | E:150 | 151.0 | 1.0 | S | -78.7 | -16.2 | NA | NA | NA | |||||||||||||
ASP | F:150 | F:150 | 148.0 | 0.987 | S | -79.6 | -30.8 | NA | NA | NA | |||||||||||||
ASP | G:150 | G:150 | 150.0 | 1.0 | S | -87.5 | -5.2 | NA | NA | NA | |||||||||||||
ASP | H:150 | H:150 | 141.0 | 0.94 | S | -82.9 | -8.1 | NA | NA | NA | |||||||||||||
2c4j | 1 | P28161 | 84.86 | 3e-141 |
X-RAY |
2005-10-26 | ASP | A:151 | A:151 | 146.0 | 0.973 | S | -87.9 | -8.8 | 146.0 | 0.973 | 0.0 |
HOH |
2.677 |
OD1 |
O |
||
ASP | B:151 | B:151 | 145.0 | 0.967 | S | -80.0 | -15.7 | 145.0 | 0.967 | 0.0 |
HOH |
3.024 |
OD1 |
O |
|||||||||
ASP | C:151 | C:151 | 147.0 | 0.98 | S | -80.9 | -22.3 | NA | NA | NA | |||||||||||||
ASP | D:151 | D:151 | 145.0 | 0.967 | S | -81.8 | -19.2 | NA | NA | NA | |||||||||||||
1xw5 | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2004-11-30 | ASP | A:150 | A:150 | 147.0 | 0.98 | S | -80.4 | -19.8 | 147.0 | 0.98 | 0.0 |
HOH |
2.677 |
OD2 |
O |
||
ASP | B:150 | B:150 | 146.0 | 0.973 | S | -79.0 | -19.6 | 146.0 | 0.973 | 0.0 |
HOH |
2.981 |
N |
O |
|||||||||
1ykc | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2005-01-25 | ASP | A:150 | A:150 | 141.0 | 0.94 | S | -73.8 | -19.8 | 141.0 | 0.94 | 0.0 |
HOH |
2.655 |
OD2 |
O |
||
ASP | B:150 | B:150 | 150.0 | 1.0 | S | -66.6 | -44.1 | 150.0 | 1.0 | 0.0 |
HOH |
2.656 |
O |
O |
|||||||||
2ab6 | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2005-08-02 | ASP | A:150 | A:150 | 147.0 | 0.98 | S | -81.2 | -36.6 | 147.0 | 0.98 | 0.0 |
HOH |
3.058 |
N |
O |
||
ASP | B:150 | B:150 | 147.0 | 0.98 | S | -77.2 | -37.6 | 147.0 | 0.98 | 0.0 |
HOH |
3.334 |
OD2 |
O |
|||||||||
ASP | C:150 | C:150 | 148.0 | 0.987 | S | -84.8 | -35.3 | NA | NA | NA | |||||||||||||
ASP | D:150 | D:150 | 148.0 | 0.987 | S | -81.5 | -39.1 | NA | NA | NA | |||||||||||||
2gtu | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
1999-03-02 | ASP | A:150 | A:150 | 135.0 | 0.9 | S | -89.2 | -25.7 | 135.0 | 0.9 | 0.0 |
HOH |
5.929 |
C |
O |
||
ASP | B:150 | B:150 | 145.0 | 0.967 | S | -84.1 | -27.4 | 145.0 | 0.967 | 0.0 |
HOH |
6.098 |
C |
O |
|||||||||
3gtu | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
1999-07-29 | ASP | A:150 | A:150 | 123.0 | 0.82 | S | -82.4 | -25.7 | 123.0 | 0.82 | 0.0 | ||||||
ASP | C:150 | C:150 | 117.0 | 0.78 | S | -83.2 | -32.8 | NA | NA | NA | |||||||||||||
3gur | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2009-10-27 | ASP | A:150 | A:150 | 116.0 | 0.773 | S | -83.4 | -17.5 | 116.0 | 0.773 | 0.0 |
HOH |
4.418 |
O |
O |
||
ASP | B:150 | B:150 | 147.0 | 0.98 | S | -79.0 | -19.9 | 147.0 | 0.98 | 0.0 |
HOH |
6.224 |
N |
O |
|||||||||
ASP | C:150 | C:150 | 150.0 | 1.0 | S | -69.0 | -14.5 | NA | NA | NA | |||||||||||||
ASP | D:150 | D:150 | 145.0 | 0.967 | S | -85.2 | -25.5 | NA | NA | NA | |||||||||||||
5hwl | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2017-11-08 | ASP | A:150 | A:150 | 142.0 | 0.947 | S | -86.4 | -7.8 | 142.0 | 0.947 | 0.0 |
HOH |
2.749 |
OD1 |
O |
||
ASP | B:150 | B:150 | 145.0 | 0.967 | S | -86.3 | -10.4 | 145.0 | 0.967 | 0.0 |
HOH |
3.383 |
N |
O |
|||||||||
1hna | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASP | A:150 | A:150 | 152.0 | 1.0 | S | -80.9 | -9.4 | 152.0 | 1.0 | 0.0 |
HOH |
3.119 |
N |
O |
||
1hnb | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASP | A:150 | A:150 | 154.0 | 1.0 | S | -97.6 | 9.4 | 154.0 | 1.0 | 0.0 | ||||||
ASP | B:150 | B:150 | 130.0 | 0.867 | S | -119.1 | 28.7 | 130.0 | 0.867 | 0.0 | |||||||||||||
1hnc | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASP | A:150 | A:150 | 133.0 | 0.887 | T | -69.5 | -19.0 | 133.0 | 0.887 | 0.0 | ||||||
ASP | B:150 | B:150 | 125.0 | 0.833 | S | -94.3 | 1.9 | 125.0 | 0.833 | 0.0 | |||||||||||||
ASP | C:150 | C:150 | 149.0 | 0.993 | S | -66.8 | -46.9 | NA | NA | NA | |||||||||||||
ASP | D:150 | D:150 | 149.0 | 0.993 | S | -81.4 | 11.5 | NA | NA | NA | |||||||||||||
2dc5 | 1 | 30354091 | 81.57 | 6e-137 |
X-RAY |
2006-06-28 | ASP | A:158 | A:158 | 131.0 | 0.873 | S | -80.7 | -12.9 | 131.0 | 0.873 | 0.0 |
HOH |
2.680 |
OD1 |
O |
||
ASP | B:158 | B:158 | 135.0 | 0.9 | S | -84.2 | -8.3 | 135.0 | 0.9 | 0.0 |
HOH |
2.641 |
OD2 |
O |
|||||||||
1b4p | 1 | P08010 | 80.65 | 6e-136 |
X-RAY |
2003-07-08 | ASN | A:150 | A:150 | 141.0 | 0.881 | S | -85.8 | -14.1 | 141.0 | 0.881 | 0.0 |
HOH |
2.495 |
OD1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p09488-f1 | 1 | P09488 | 100.0 | 1e-164 | ASN | A:151 | A:151 | 135.0 | 0.844 | S | -85.5 | -17.3 | |
af-q03013-f1 | 1 | Q03013 | 86.7 | 3e-145 | ASP | A:151 | A:151 | 135.0 | 0.9 | S | -84.0 | -15.5 | |
af-p46439-f1 | 1 | P46439 | 87.61 | 6e-142 | ASP | A:151 | A:151 | 133.0 | 0.887 | S | -82.0 | -18.3 | |
af-p28161-f1 | 1 | P28161 | 84.4 | 3e-141 | ASP | A:151 | A:151 | 144.0 | 0.96 | S | -84.7 | -13.3 |