Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110233104 . A C CCDS809.1:NM_000561.3:c.485gAt>gCt_NP_000552.2:p.162D>A Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ASP A:162 A:161 8.0 0.053 H -58.9 -39.3 8.0 0.053 0.0 HOH
 2.706
 OD2
 O
ASP B:162 B:161 8.0 0.053 H -59.9 -40.3 8.0 0.053 0.0 HOH
 2.664
 OD2
 O
ASP C:162 C:161 8.0 0.053 H -59.7 -41.1 NA NA NA
ASP D:162 D:161 8.0 0.053 H -58.8 -40.8 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ASP A:162 A:161 7.0 0.047 H -43.9 -47.8 7.0 0.047 0.0 GDN
HOH
 8.569
2.630
 OD2
OD2
 O2B
O
ASP B:162 B:161 7.0 0.047 H -48.0 -45.7 NA NA NA
ASP C:162 C:161 7.0 0.047 H -47.5 -45.1 7.0 0.047 0.0 GDN
HOH
 8.351
2.874
 OD2
OD2
 O2B
O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 ASP A:162 A:161 6.0 0.04 H -44.4 -51.5 6.0 0.04 0.0 HOH
 2.621
 OD2
 O
ASP B:162 B:161 6.0 0.04 H -47.1 -53.2 6.0 0.04 0.0 HOH
 2.473
 OD2
 O
ASP C:162 C:161 6.0 0.04 H -44.4 -53.9 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 ASP A:162 A:161 9.0 0.06 H -55.2 -46.6 9.0 0.06 0.0 GTD
HOH
 8.080
3.915
 OD2
OD2
 O22
O
ASP B:162 B:161 9.0 0.06 H -57.1 -48.3 9.0 0.06 0.0 GTD
HOH
 7.935
2.571
 OD2
OD2
 O22
O
ASP C:162 C:161 8.0 0.053 H -55.4 -44.6 NA NA NA
ASP D:162 D:161 10.0 0.067 H -58.4 -43.9 NA NA NA
ASP E:162 E:161 8.0 0.053 H -56.9 -46.6 NA NA NA
ASP F:162 F:161 8.0 0.053 H -57.2 -47.8 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 ASP A:162 A:161 8.0 0.053 H -62.3 -44.7 8.0 0.053 0.0 HOH
 2.558
 OD2
 O
ASP B:162 B:161 8.0 0.053 H -63.0 -41.6 NA NA NA
ASP C:162 C:161 7.0 0.047 H -61.9 -45.4 NA NA NA
ASP D:162 D:161 9.0 0.06 H -61.3 -45.3 9.0 0.06 0.0 HOH
 2.725
 OD2
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 ASP A:161 A:161 4.0 0.027 H -53.6 -51.5 4.0 0.027 0.0 HOH
 2.780
 OD2
 O
ASP B:161 B:161 4.0 0.027 H -54.0 -42.6 4.0 0.027 0.0 HOH
 2.730
 OD2
 O
ASP C:161 C:161 6.0 0.04 H -52.4 -49.2 NA NA NA
ASP D:161 D:161 4.0 0.027 H -58.8 -42.9 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 ASP A:161 A:161 15.0 0.1 H -62.2 -56.8 15.0 0.1 0.0
ASP B:161 B:161 11.0 0.073 H -52.2 -51.4 11.0 0.073 0.0
ASP C:161 C:161 12.0 0.08 H -69.5 -44.5 NA NA NA
ASP D:161 D:161 9.0 0.06 H -54.6 -61.3 NA NA NA
ASP E:161 E:161 9.0 0.06 H -67.9 -42.4 NA NA NA
ASP F:161 F:161 16.0 0.107 H -58.9 -58.1 NA NA NA
ASP G:161 G:161 12.0 0.08 H -65.8 -44.9 NA NA NA
ASP H:161 H:161 11.0 0.073 H -56.8 -48.1 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 ASP A:162 A:162 0.0 0.0 H -59.4 -51.7 0.0 0.0 0.0 GSO
HOH
 9.431
2.732
 OD2
OD2
 OF2
O
ASP B:162 B:162 0.0 0.0 H -61.6 -47.8 0.0 0.0 0.0 GSO
HOH
 9.399
2.657
 OD2
OD2
 OF2
O
ASP C:162 C:162 0.0 0.0 H -56.1 -50.8 NA NA NA
ASP D:162 D:162 0.0 0.0 H -58.6 -49.8 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 ASP A:161 A:161 0.0 0.0 H -58.3 -54.5 0.0 0.0 0.0 HOH
 2.601
 OD2
 O
ASP B:161 B:161 0.0 0.0 H -58.3 -52.3 0.0 0.0 0.0 GSH
HOH
 9.967
2.831
 OD2
OD2
 O12
O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 ASP A:161 A:161 0.0 0.0 H -53.2 -49.3 0.0 0.0 0.0 GDS
HOH
 5.223
2.698
 OD2
OD2
 OE3
O
ASP B:161 B:161 0.0 0.0 H -50.4 -55.9 0.0 0.0 0.0 GDS
HOH
 5.197
2.838
 OD2
OD2
 OE3
O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 ASP A:161 A:161 0.0 0.0 H -50.4 -56.6 0.0 0.0 0.0 GSM
HOH
 9.965
2.609
 OD2
OD2
 O12
O
ASP B:161 B:161 0.0 0.0 H -55.4 -53.5 0.0 0.0 0.0 GSM
HOH
 9.921
6.061
 OD2
OD2
 O12
O
ASP C:161 C:161 0.0 0.0 H -53.5 -55.7 NA NA NA
ASP D:161 D:161 0.0 0.0 H -56.1 -53.8 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 ASP A:161 A:161 0.0 0.0 H -56.3 -55.9 0.0 0.0 0.0 HOH
 2.711
 OD2
 O
ASP B:161 B:161 0.0 0.0 H -49.8 -56.1 0.0 0.0 0.0 HOH
 5.908
 OD2
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 ASP A:161 A:161 0.0 0.0 H -57.6 -55.8 0.0 0.0 0.0 HOH
 5.832
 OD2
 O
ASP C:161 C:161 0.0 0.0 H -58.8 -42.4 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 ASP A:161 A:161 0.0 0.0 H -66.5 -45.0 0.0 0.0 0.0 BYG
HOH
 5.546
2.592
 OD2
OD2
 OA3
O
ASP B:161 B:161 0.0 0.0 H -50.7 -57.5 0.0 0.0 0.0 HOH
 2.605
 OD2
 O
ASP C:161 C:161 0.0 0.0 H -55.8 -50.9 NA NA NA
ASP D:161 D:161 0.0 0.0 H -58.1 -51.2 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 ASP A:161 A:161 0.0 0.0 H -62.0 -48.0 0.0 0.0 0.0 NNE
HOH
 8.205
2.814
 OD2
OD2
 CL4
O
ASP B:161 B:161 0.0 0.0 H -61.0 -46.8 0.0 0.0 0.0 NNE
HOH
 8.326
2.752
 OD2
OD2
 CL1
O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASP A:161 A:161 3.0 0.02 H -55.4 -50.8 3.0 0.02 0.0 HOH
 2.706
 OD2
 O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASP A:161 A:161 2.0 0.013 H -61.8 -51.8 2.0 0.013 0.0
ASP B:161 B:161 0.0 0.0 H -55.3 -45.0 0.0 0.0 0.0 GDN
 9.931
 OD2
 SG2
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ASP A:161 A:161 2.0 0.013 H -60.5 -53.7 2.0 0.013 0.0
ASP B:161 B:161 0.0 0.0 H -55.4 -35.7 0.0 0.0 0.0 GDN
 9.021
 OD2
 SG2
ASP C:161 C:161 0.0 0.0 H -45.5 -51.0 NA NA NA
ASP D:161 D:161 6.0 0.04 H -46.0 -43.5 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 ASP A:169 A:169 0.0 0.0 H -59.2 -48.2 0.0 0.0 0.0 HOH
 2.484
 OD2
 O
ASP B:169 B:169 0.0 0.0 H -57.4 -47.8 0.0 0.0 0.0 HOH
 2.733
 OD2
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 ASP A:161 A:161 0.0 0.0 H -60.8 -47.4 0.0 0.0 0.0 GPS
HOH
 7.817
2.489
 OD2
OD2
 CE4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 ASP A:162 A:162 8.0 0.053 H -58.8 -46.1
af-q03013-f1 1 Q03013 86.7 3e-145 ASP A:162 A:162 14.0 0.093 H -58.8 -45.6
af-p46439-f1 1 P46439 87.61 6e-142 ASP A:162 A:162 5.0 0.033 H -58.2 -48.5
af-p28161-f1 1 P28161 84.4 3e-141 ASP A:162 A:162 0.0 0.0 H -63.9 -35.4