Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110233115 . C A CCDS809.1:NM_000561.3:c.496Ctc>Atc_NP_000552.2:p.166L>I Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 LEU A:166 A:165 3.0 0.018 H -60.4 -28.5 3.0 0.018 0.0 HOH
 3.471
 CD1
 O
LEU B:166 B:165 4.0 0.024 H -59.1 -30.2 4.0 0.024 0.0 HOH
 3.295
 CD1
 O
LEU C:166 C:165 3.0 0.018 H -61.7 -28.4 NA NA NA
LEU D:166 D:165 3.0 0.018 H -60.4 -29.2 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 LEU A:166 A:165 3.0 0.018 H -48.5 -29.6 3.0 0.018 0.0 GDN
HOH
 7.936
3.115
 CD1
CD1
 O2A
O
LEU B:166 B:165 3.0 0.018 H -52.9 -30.6 NA NA NA
LEU C:166 C:165 4.0 0.024 H -48.5 -32.4 4.0 0.024 0.0 GDN
HOH
 7.705
3.946
 CD1
CD1
 O2A
O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 LEU A:166 A:165 2.0 0.012 H -49.4 -30.9 2.0 0.012 0.0 ZN
HOH
 9.989
6.663
 CD1
CD1
 ZN
O
LEU B:166 B:165 2.0 0.012 H -51.2 -30.6 2.0 0.012 0.0 ZN
HOH
 9.828
3.747
 CD1
CD1
 ZN
O
LEU C:166 C:165 1.0 0.006 H -57.1 -26.7 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 LEU A:166 A:165 1.0 0.006 H -47.7 -42.9 1.0 0.006 0.0 GTD
HOH
 7.515
6.195
 CD1
CD1
 O22
O
LEU B:166 B:165 1.0 0.006 H -53.9 -42.9 1.0 0.006 0.0 GTD
HOH
 7.349
3.583
 CD1
CD1
 O22
O
LEU C:166 C:165 1.0 0.006 H -52.3 -43.4 NA NA NA
LEU D:166 D:165 2.0 0.012 H -49.3 -41.0 NA NA NA
LEU E:166 E:165 2.0 0.012 H -48.4 -44.0 NA NA NA
LEU F:166 F:165 2.0 0.012 H -51.3 -44.8 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 LEU A:166 A:165 2.0 0.012 H -51.0 -43.1 2.0 0.012 0.0 HOH
 3.294
 CD1
 O
LEU B:166 B:165 2.0 0.012 H -56.0 -41.9 NA NA NA
LEU C:166 C:165 2.0 0.012 H -55.7 -39.9 NA NA NA
LEU D:166 D:165 1.0 0.006 H -54.6 -38.8 1.0 0.006 0.0 HOH
 3.640
 CD2
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 LEU A:165 A:165 3.0 0.018 H -60.7 -37.2 3.0 0.018 0.0 HOH
 3.619
 CD1
 O
LEU B:165 B:165 2.0 0.012 H -55.8 -43.8 2.0 0.012 0.0 HOH
 3.907
 CD1
 O
LEU C:165 C:165 3.0 0.018 H -53.2 -41.9 NA NA NA
LEU D:165 D:165 2.0 0.012 H -56.0 -47.3 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 LEU A:165 A:165 21.0 0.124 H -48.1 -51.1 21.0 0.124 0.0
LEU B:165 B:165 14.0 0.082 H -60.8 -54.2 14.0 0.082 0.0
LEU C:165 C:165 12.0 0.071 H -57.2 -39.9 NA NA NA
LEU D:165 D:165 12.0 0.071 H -59.5 -42.5 NA NA NA
LEU E:165 E:165 13.0 0.076 H -67.2 -51.5 NA NA NA
LEU F:165 F:165 16.0 0.094 H -61.3 -62.3 NA NA NA
LEU G:165 G:165 12.0 0.071 H -59.4 -29.4 NA NA NA
LEU H:165 H:165 14.0 0.082 H -65.3 -52.8 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 ARG A:166 A:166 7.0 0.031 H -63.8 -38.4 7.0 0.031 0.0 GSO
HOH
 6.470
3.263
 NH1
NH1
 OF2
O
ARG B:166 B:166 8.0 0.036 H -61.9 -36.3 8.0 0.036 0.0 GSO
HOH
 6.420
2.766
 NH1
NH1
 OF2
O
ARG C:166 C:166 7.0 0.031 H -63.4 -36.2 NA NA NA
ARG D:166 D:166 7.0 0.031 H -61.9 -40.6 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 ARG A:165 A:165 4.0 0.018 H -71.6 -25.3 4.0 0.018 0.0 GSH
HOH
 8.588
2.948
 NH1
NH1
 SG2
O
ARG B:165 B:165 4.0 0.018 H -73.6 -21.5 4.0 0.018 0.0 GSH
HOH
 8.705
2.839
 NH1
NH1
 SG2
O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 ARG A:165 A:165 2.0 0.009 H -65.0 -21.2 2.0 0.009 0.0 GDS
HOH
 2.986
2.853
 NH1
NH1
 OE3
O
ARG B:165 B:165 3.0 0.013 H -62.0 -25.8 3.0 0.013 0.0 GDS
HOH
 2.827
2.603
 NH1
NH1
 OE3
O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 ARG A:165 A:165 4.0 0.018 H -67.8 -26.6 4.0 0.018 0.0 GSM
HOH
 8.398
3.036
 NH1
NH1
 C4
O
ARG B:165 B:165 4.0 0.018 H -70.5 -24.5 4.0 0.018 0.0 GSM
HOH
 8.527
3.404
 NH1
NH1
 C4
O
ARG C:165 C:165 4.0 0.018 H -70.2 -25.0 NA NA NA
ARG D:165 D:165 4.0 0.018 H -69.3 -26.5 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 ARG A:165 A:165 5.0 0.022 H -59.8 -37.4 5.0 0.022 0.0 HOH
 2.825
 NH1
 O
ARG B:165 B:165 7.0 0.031 H -61.5 -31.1 7.0 0.031 0.0 HOH
 2.676
 NH1
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 ARG A:165 A:165 6.0 0.027 H -63.6 -38.2 6.0 0.027 0.0 HOH
 3.118
 NH1
 O
ARG C:165 C:165 8.0 0.036 H -64.6 -35.4 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 ARG A:165 A:165 3.0 0.013 H -67.2 -23.8 3.0 0.013 0.0 BYG
HOH
 2.953
4.827
 NH1
NH2
 OA3
O
ARG B:165 B:165 2.0 0.009 H -70.4 -25.2 2.0 0.009 0.0 GSH
HOH
 8.678
2.786
 NH1
NH1
 SG2
O
ARG C:165 C:165 3.0 0.013 H -73.8 -22.3 NA NA NA
ARG D:165 D:165 8.0 0.036 H -72.3 -17.9 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 ARG A:165 A:165 5.0 0.022 H -65.6 -27.4 5.0 0.022 0.0 GSH
NNE
HOH
 8.707
5.748
2.957
 NH1
NH1
NH1
 SG2
CBN
O
ARG B:165 B:165 4.0 0.018 H -66.3 -27.6 4.0 0.018 0.0 GSH
NNE
HOH
 8.674
5.621
4.520
 NH1
NH1
NH2
 SG2
CAN
O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:165 A:165 12.0 0.053 H -64.2 -31.9 12.0 0.053 0.0 GDN
HOH
 9.728
2.689
 NH2
NE
 SG2
O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:165 A:165 35.0 0.156 H -54.3 -43.8 35.0 0.156 0.0
ARG B:165 B:165 1.0 0.004 H -57.9 -43.3 1.0 0.004 0.0 GDN
 8.310
 NH1
 SG2
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:165 A:165 18.0 0.08 H -61.6 -57.5 18.0 0.08 0.0
ARG B:165 B:165 17.0 0.076 H -54.8 -33.4 17.0 0.076 0.0 GDN
 7.916
 NH1
 SG2
ARG C:165 C:165 13.0 0.058 H -54.5 -50.8 NA NA NA
ARG D:165 D:165 17.0 0.076 H -55.8 -50.7 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 ARG A:173 A:173 2.0 0.009 H -65.0 -38.3 2.0 0.009 0.0 HOH
 2.498
 NH1
 O
ARG B:173 B:173 7.0 0.031 H -62.0 -45.3 7.0 0.031 0.0 HOH
 2.746
 CD
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 GLN A:165 A:165 4.0 0.022 H -60.1 -34.8 4.0 0.022 0.0 GPS
HOH
 5.963
2.842
 NE2
OE1
 CE4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 LEU A:166 A:166 1.0 0.006 H -58.6 -42.4
af-q03013-f1 1 Q03013 86.7 3e-145 LEU A:166 A:166 7.0 0.041 H -56.3 -43.4
af-p46439-f1 1 P46439 87.61 6e-142 MET A:166 A:166 3.0 0.016 H -56.1 -39.7
af-p28161-f1 1 P28161 84.4 3e-141 ARG A:166 A:166 7.0 0.031 H -62.3 -36.8