Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 110233120 | . | C | A | CCDS809.1:NM_000561.3:c.501caC>caA_NP_000552.2:p.167H>Q | Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1xw6 | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2004-12-21 | HIS | A:167 | A:166 | 4.0 | 0.021 | H | -84.5 | -30.6 | 4.0 | 0.021 | 0.0 |
HOH |
3.737 |
NE2 |
O |
||
HIS | B:167 | B:166 | 3.0 | 0.015 | H | -82.3 | -31.3 | 3.0 | 0.015 | 0.0 |
HOH |
3.961 |
NE2 |
O |
|||||||||
HIS | C:167 | C:166 | 3.0 | 0.015 | H | -83.9 | -31.4 | NA | NA | NA | |||||||||||||
HIS | D:167 | D:166 | 3.0 | 0.015 | H | -83.9 | -29.4 | NA | NA | NA | |||||||||||||
1xwk | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2004-12-21 | HIS | A:167 | A:166 | 4.0 | 0.021 | H | -84.6 | -24.9 | 4.0 | 0.021 | 0.0 |
HOH |
6.700 |
CE1 |
O |
||
HIS | B:167 | B:166 | 5.0 | 0.026 | H | -82.6 | -27.9 | NA | NA | NA | |||||||||||||
HIS | C:167 | C:166 | 5.0 | 0.026 | H | -81.2 | -23.4 | 5.0 | 0.026 | 0.0 |
HOH |
6.774 |
CE1 |
O |
|||||||||
1yj6 | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2005-02-01 | HIS | A:167 | A:166 | 3.0 | 0.015 | H | -82.9 | -32.6 | 3.0 | 0.015 | 0.0 |
HOH |
6.712 |
O |
O |
||
HIS | B:167 | B:166 | 4.0 | 0.021 | H | -84.5 | -28.6 | 4.0 | 0.021 | 0.0 |
HOH |
8.238 |
N |
O |
|||||||||
HIS | C:167 | C:166 | 4.0 | 0.021 | H | -87.2 | -31.2 | NA | NA | NA | |||||||||||||
2f3m | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2006-04-25 | HIS | A:167 | A:166 | 5.0 | 0.026 | H | -76.2 | -36.4 | 5.0 | 0.026 | 0.0 |
HOH |
8.631 |
CE1 |
O |
||
HIS | B:167 | B:166 | 4.0 | 0.021 | H | -73.4 | -41.5 | 4.0 | 0.021 | 0.0 |
HOH |
4.026 |
NE2 |
O |
|||||||||
HIS | C:167 | C:166 | 4.0 | 0.021 | H | -76.2 | -37.1 | NA | NA | NA | |||||||||||||
HIS | D:167 | D:166 | 4.0 | 0.021 | H | -78.7 | -42.6 | NA | NA | NA | |||||||||||||
HIS | E:167 | E:166 | 4.0 | 0.021 | H | -71.6 | -37.7 | NA | NA | NA | |||||||||||||
HIS | F:167 | F:166 | 3.0 | 0.015 | H | -73.6 | -39.1 | NA | NA | NA | |||||||||||||
7beu | 1 | P09488 | 100.0 | 3e-164 |
X-RAY |
2022-01-12 | HIS | A:167 | A:166 | 6.0 | 0.031 | H | -77.7 | -28.2 | 6.0 | 0.031 | 0.0 |
HOH |
3.431 |
NE2 |
O |
||
HIS | B:167 | B:166 | 4.0 | 0.021 | H | -75.7 | -25.6 | NA | NA | NA | |||||||||||||
HIS | C:167 | C:166 | 3.0 | 0.015 | H | -78.0 | -28.8 | NA | NA | NA | |||||||||||||
HIS | D:167 | D:166 | 4.0 | 0.021 | H | -81.0 | -27.9 | 4.0 | 0.021 | 0.0 |
HOH |
3.904 |
NE2 |
O |
|||||||||
1gtu | 1 | P09488 | 100.0 | 2e-163 |
X-RAY |
1999-02-02 | HIS | A:166 | A:166 | 4.0 | 0.021 | H | -78.1 | -31.5 | 4.0 | 0.021 | 0.0 |
HOH |
8.559 |
N |
O |
||
HIS | B:166 | B:166 | 4.0 | 0.021 | H | -72.2 | -28.0 | 4.0 | 0.021 | 0.0 |
HOH |
8.636 |
N |
O |
|||||||||
HIS | C:166 | C:166 | 4.0 | 0.021 | H | -75.0 | -27.0 | NA | NA | NA | |||||||||||||
HIS | D:166 | D:166 | 3.0 | 0.015 | H | -68.8 | -25.4 | NA | NA | NA | |||||||||||||
4gtu | 1 | Q03013 | 87.04 | 3e-144 |
X-RAY |
2000-01-14 | HIS | A:166 | A:166 | 2.0 | 0.01 | H | -70.9 | -11.0 | 2.0 | 0.01 | 0.0 | ||||||
HIS | B:166 | B:166 | 0.0 | 0.0 | H | -65.7 | -36.6 | 0.0 | 0.0 | 0.0 | |||||||||||||
HIS | C:166 | C:166 | 2.0 | 0.01 | H | -59.6 | -35.1 | NA | NA | NA | |||||||||||||
HIS | D:166 | D:166 | 2.0 | 0.01 | H | -76.8 | -21.2 | NA | NA | NA | |||||||||||||
HIS | E:166 | E:166 | 2.0 | 0.01 | H | -59.9 | -36.6 | NA | NA | NA | |||||||||||||
HIS | F:166 | F:166 | 8.0 | 0.041 | H | -63.5 | -30.6 | NA | NA | NA | |||||||||||||
HIS | G:166 | G:166 | 2.0 | 0.01 | H | -71.4 | -33.5 | NA | NA | NA | |||||||||||||
HIS | H:166 | H:166 | 1.0 | 0.005 | H | -58.2 | -41.8 | NA | NA | NA | |||||||||||||
2c4j | 1 | P28161 | 84.86 | 3e-141 |
X-RAY |
2005-10-26 | ASN | A:167 | A:167 | 2.0 | 0.013 | H | -62.4 | -35.3 | 2.0 | 0.013 | 0.0 |
HOH |
2.776 |
ND2 |
O |
||
ASN | B:167 | B:167 | 2.0 | 0.013 | H | -66.9 | -34.8 | 2.0 | 0.013 | 0.0 |
HOH |
2.887 |
ND2 |
O |
|||||||||
ASN | C:167 | C:167 | 1.0 | 0.006 | H | -66.0 | -35.3 | NA | NA | NA | |||||||||||||
ASN | D:167 | D:167 | 2.0 | 0.013 | H | -63.2 | -34.2 | NA | NA | NA | |||||||||||||
1xw5 | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2004-11-30 | ASN | A:166 | A:166 | 1.0 | 0.006 | H | -73.2 | -30.3 | 1.0 | 0.006 | 0.0 |
HOH |
2.713 |
OD1 |
O |
||
ASN | B:166 | B:166 | 1.0 | 0.006 | H | -75.9 | -32.0 | 1.0 | 0.006 | 0.0 |
HOH |
2.805 |
OD1 |
O |
|||||||||
1ykc | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2005-01-25 | ASN | A:166 | A:166 | 1.0 | 0.006 | H | -78.3 | -32.8 | 1.0 | 0.006 | 0.0 |
GDS HOH |
9.985 2.899 |
OD1 OD1 |
OE3 O |
||
ASN | B:166 | B:166 | 1.0 | 0.006 | H | -74.1 | -35.6 | 1.0 | 0.006 | 0.0 |
GDS HOH |
9.826 2.780 |
OD1 OD1 |
OE4 O |
|||||||||
2ab6 | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2005-08-02 | ASN | A:166 | A:166 | 1.0 | 0.006 | H | -67.0 | -40.9 | 1.0 | 0.006 | 0.0 |
HOH |
7.530 |
C |
O |
||
ASN | B:166 | B:166 | 1.0 | 0.006 | H | -69.7 | -38.1 | 1.0 | 0.006 | 0.0 |
HOH |
2.857 |
OD1 |
O |
|||||||||
ASN | C:166 | C:166 | 1.0 | 0.006 | H | -71.8 | -35.8 | NA | NA | NA | |||||||||||||
ASN | D:166 | D:166 | 1.0 | 0.006 | H | -68.1 | -37.3 | NA | NA | NA | |||||||||||||
2gtu | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
1999-03-02 | ASN | A:166 | A:166 | 2.0 | 0.013 | H | -70.8 | -32.4 | 2.0 | 0.013 | 0.0 |
HOH |
3.441 |
OD1 |
O |
||
ASN | B:166 | B:166 | 2.0 | 0.013 | H | -73.3 | -33.3 | 2.0 | 0.013 | 0.0 |
HOH |
2.916 |
OD1 |
O |
|||||||||
3gtu | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
1999-07-29 | ASN | A:166 | A:166 | 3.0 | 0.019 | H | -66.8 | -37.8 | 3.0 | 0.019 | 0.0 |
HOH |
9.427 |
OD1 |
O |
||
ASN | C:166 | C:166 | 3.0 | 0.019 | H | -69.6 | -37.2 | NA | NA | NA | |||||||||||||
3gur | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2009-10-27 | ASN | A:166 | A:166 | 1.0 | 0.006 | H | -72.3 | -33.4 | 1.0 | 0.006 | 0.0 |
BYG HOH |
9.653 7.018 |
OD1 ND2 |
OA4 O |
||
ASN | B:166 | B:166 | 1.0 | 0.006 | H | -70.7 | -31.7 | 1.0 | 0.006 | 0.0 |
HOH |
7.300 |
ND2 |
O |
|||||||||
ASN | C:166 | C:166 | 2.0 | 0.013 | H | -70.9 | -34.0 | NA | NA | NA | |||||||||||||
ASN | D:166 | D:166 | 2.0 | 0.013 | H | -72.8 | -33.0 | NA | NA | NA | |||||||||||||
5hwl | 1 | P28161 | 84.33 | 6e-140 |
X-RAY |
2017-11-08 | ASN | A:166 | A:166 | 5.0 | 0.031 | H | -68.4 | -37.9 | 5.0 | 0.031 | 0.0 |
HOH |
3.003 |
ND2 |
O |
||
ASN | B:166 | B:166 | 3.0 | 0.019 | H | -65.2 | -39.3 | 3.0 | 0.019 | 0.0 |
HOH |
3.064 |
OD1 |
O |
|||||||||
1hna | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASN | A:166 | A:166 | 2.0 | 0.013 | H | -78.0 | -28.5 | 2.0 | 0.013 | 0.0 |
HOH |
3.405 |
OD1 |
O |
||
1hnb | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASN | A:166 | A:166 | 4.0 | 0.025 | H | -74.3 | -24.0 | 4.0 | 0.025 | 0.0 | ||||||
ASN | B:166 | B:166 | 0.0 | 0.0 | H | -70.6 | -23.2 | 0.0 | 0.0 | 0.0 | |||||||||||||
1hnc | 1 | P28161 | 83.87 | 1e-138 |
X-RAY |
1994-01-31 | ASN | A:166 | A:166 | 4.0 | 0.025 | H | -58.8 | -26.9 | 4.0 | 0.025 | 0.0 | ||||||
ASN | B:166 | B:166 | 3.0 | 0.019 | H | -71.0 | -39.2 | 3.0 | 0.019 | 0.0 | |||||||||||||
ASN | C:166 | C:166 | 7.0 | 0.044 | H | -60.2 | -26.4 | NA | NA | NA | |||||||||||||
ASN | D:166 | D:166 | 5.0 | 0.031 | H | -59.0 | -47.2 | NA | NA | NA | |||||||||||||
2dc5 | 1 | 30354091 | 81.57 | 6e-137 |
X-RAY |
2006-06-28 | ASN | A:174 | A:174 | 1.0 | 0.006 | H | -68.2 | -33.0 | 1.0 | 0.006 | 0.0 |
HOH |
2.953 |
OD1 |
O |
||
ASN | B:174 | B:174 | 0.0 | 0.0 | H | -66.3 | -29.9 | 0.0 | 0.0 | 0.0 |
HOH |
5.943 |
C |
O |
|||||||||
1b4p | 1 | P08010 | 80.65 | 6e-136 |
X-RAY |
2003-07-08 | HIS | A:166 | A:166 | 0.0 | 0.0 | H | -74.0 | -31.9 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
9.484 6.513 |
C NE2 |
O3 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p09488-f1 | 1 | P09488 | 100.0 | 1e-164 | HIS | A:167 | A:167 | 3.0 | 0.015 | H | -67.2 | -39.7 | |
af-q03013-f1 | 1 | Q03013 | 86.7 | 3e-145 | HIS | A:167 | A:167 | 0.0 | 0.0 | H | -70.1 | -38.3 | |
af-p46439-f1 | 1 | P46439 | 87.61 | 6e-142 | LYS | A:167 | A:167 | 1.0 | 0.005 | H | -69.9 | -39.0 | |
af-p28161-f1 | 1 | P28161 | 84.4 | 3e-141 | ASN | A:167 | A:167 | 1.0 | 0.006 | H | -67.0 | -35.2 |