Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110233179 . G A CCDS809.1:NM_000561.3:c.560cGc>cAc_NP_000552.2:p.187R>H Homo sapiens glutathione S-transferase mu 1 (GSTM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ARG A:187 A:186 86.0 0.382 H -64.3 -40.0 86.0 0.382 0.0 HOH
 2.666
 NH1
 O
ARG B:187 B:186 88.0 0.391 H -61.5 -40.7 88.0 0.391 0.0 HOH
 2.634
 NH2
 O
ARG C:187 C:186 86.0 0.382 H -64.2 -40.3 NA NA NA
ARG D:187 D:186 84.0 0.373 H -63.5 -41.7 NA NA NA
1xwk 1 P09488 100.0 3e-164 X-RAY
 2004-12-21 ARG A:187 A:186 86.0 0.382 H -57.6 -38.1 86.0 0.382 0.0 HOH
 5.583
 NH1
 O
ARG B:187 B:186 86.0 0.382 H -63.2 -30.4 NA NA NA
ARG C:187 C:186 89.0 0.396 H -57.4 -36.1 89.0 0.396 0.0 HOH
 6.382
 CD
 O
1yj6 1 P09488 100.0 3e-164 X-RAY
 2005-02-01 ARG A:187 A:186 87.0 0.387 H -56.2 -40.8 87.0 0.387 0.0 HOH
 3.142
 NH2
 O
ARG B:187 B:186 86.0 0.382 H -56.5 -38.3 86.0 0.382 0.0 HOH
 3.774
 NH2
 O
ARG C:187 C:186 85.0 0.378 H -58.8 -39.1 NA NA NA
2f3m 1 P09488 100.0 3e-164 X-RAY
 2006-04-25 ARG A:187 A:186 86.0 0.382 H -44.3 -51.2 86.0 0.382 0.0
ARG B:187 B:186 85.0 0.378 H -41.4 -52.2 85.0 0.378 0.0 HOH
 9.523
 NE
 O
ARG C:187 C:186 84.0 0.373 H -42.6 -48.8 NA NA NA
ARG D:187 D:186 81.0 0.36 H -44.6 -50.5 NA NA NA
ARG E:187 E:186 84.0 0.373 H -43.6 -49.8 NA NA NA
ARG F:187 F:186 84.0 0.373 H -42.9 -51.7 NA NA NA
7beu 1 P09488 100.0 3e-164 X-RAY
 2022-01-12 ARG A:187 A:186 85.0 0.378 H -67.3 -42.9 85.0 0.378 0.0 HOH
 2.437
 NE
 O
ARG B:187 B:186 87.0 0.387 H -67.3 -42.8 NA NA NA
ARG C:187 C:186 81.0 0.36 H -63.8 -46.3 NA NA NA
ARG D:187 D:186 66.0 0.293 H -69.7 -39.5 66.0 0.293 0.0 HOH
 2.661
 O
 O
1gtu 1 P09488 100.0 2e-163 X-RAY
 1999-02-02 ARG A:186 A:186 88.0 0.391 H -58.0 -38.8 88.0 0.391 0.0
ARG B:186 B:186 94.0 0.418 H -51.6 -52.9 94.0 0.418 0.0
ARG C:186 C:186 89.0 0.396 H -63.3 -42.3 NA NA NA
ARG D:186 D:186 88.0 0.391 H -61.0 -38.8 NA NA NA
4gtu 1 Q03013 87.04 3e-144 X-RAY
 2000-01-14 ARG A:186 A:186 88.0 0.391 H -64.8 -50.9 88.0 0.391 0.0
ARG B:186 B:186 94.0 0.418 H -60.9 -47.0 94.0 0.418 0.0
ARG C:186 C:186 88.0 0.391 H -67.4 -43.4 NA NA NA
ARG D:186 D:186 94.0 0.418 H -66.7 -45.5 NA NA NA
ARG E:186 E:186 74.0 0.329 H -87.9 -42.4 NA NA NA
ARG F:186 F:186 80.0 0.356 H -71.3 -17.6 NA NA NA
ARG G:186 G:186 79.0 0.351 H -68.9 -49.6 NA NA NA
ARG H:186 H:186 95.0 0.422 H -64.2 -44.7 NA NA NA
2c4j 1 P28161 84.86 3e-141 X-RAY
 2005-10-26 ARG A:187 A:187 87.0 0.387 H -65.1 -43.8 87.0 0.387 0.0 HOH
 2.823
 NH1
 O
ARG B:187 B:187 80.0 0.356 H -61.3 -43.5 80.0 0.356 0.0 HOH
 2.712
 O
 O
ARG C:187 C:187 73.0 0.324 H -65.8 -41.0 NA NA NA
ARG D:187 D:187 83.0 0.369 H -64.6 -43.0 NA NA NA
1xw5 1 P28161 84.33 6e-140 X-RAY
 2004-11-30 ARG A:186 A:186 90.0 0.4 H -60.1 -48.6 90.0 0.4 0.0 HOH
 2.620
 O
 O
ARG B:186 B:186 89.0 0.396 H -62.3 -40.1 89.0 0.396 0.0 HOH
 2.649
 NH2
 O
1ykc 1 P28161 84.33 6e-140 X-RAY
 2005-01-25 ARG A:186 A:186 83.0 0.369 H -51.9 -48.2 83.0 0.369 0.0 HOH
 2.746
 O
 O
ARG B:186 B:186 85.0 0.378 H -56.8 -49.9 85.0 0.378 0.0 HOH
 2.879
 O
 O
2ab6 1 P28161 84.33 6e-140 X-RAY
 2005-08-02 ARG A:186 A:186 82.0 0.364 H -47.4 -52.0 82.0 0.364 0.0 HOH
 4.620
 N
 O
ARG B:186 B:186 84.0 0.373 H -49.1 -48.4 84.0 0.373 0.0 HOH
 4.030
 NH2
 O
ARG C:186 C:186 80.0 0.356 H -39.6 -52.6 NA NA NA
ARG D:186 D:186 82.0 0.364 H -48.5 -46.1 NA NA NA
2gtu 1 P28161 84.33 6e-140 X-RAY
 1999-03-02 ARG A:186 A:186 86.0 0.382 H -67.0 -43.8 86.0 0.382 0.0 HOH
 2.722
 NH2
 O
ARG B:186 B:186 82.0 0.364 H -68.8 -42.1 82.0 0.364 0.0 HOH
 2.603
 NH2
 O
3gtu 1 P28161 84.33 6e-140 X-RAY
 1999-07-29 ARG A:186 A:186 83.0 0.369 H -58.1 -40.1 83.0 0.369 0.0
ARG C:186 C:186 83.0 0.369 H -58.4 -38.8 NA NA NA
3gur 1 P28161 84.33 6e-140 X-RAY
 2009-10-27 ARG A:186 A:186 86.0 0.382 H -62.5 -42.6 86.0 0.382 0.0 HOH
 2.874
 NH2
 O
ARG B:186 B:186 85.0 0.378 H -64.3 -45.7 85.0 0.378 0.0 HOH
 2.733
 O
 O
ARG C:186 C:186 85.0 0.378 H -57.8 -48.8 NA NA NA
ARG D:186 D:186 88.0 0.391 H -57.5 -58.9 NA NA NA
5hwl 1 P28161 84.33 6e-140 X-RAY
 2017-11-08 ARG A:186 A:186 87.0 0.387 H -62.7 -47.7 87.0 0.387 0.0 HOH
 2.831
 O
 O
ARG B:186 B:186 85.0 0.378 H -58.2 -49.9 85.0 0.378 0.0 HOH
 2.848
 NH2
 O
1hna 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:186 A:186 88.0 0.391 H -65.6 -34.1 88.0 0.391 0.0 HOH
 2.784
 NH2
 O
1hnb 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:186 A:186 86.0 0.382 H -76.6 -43.3 86.0 0.382 0.0
ARG B:186 B:186 84.0 0.373 H -55.5 -49.7 84.0 0.373 0.0
1hnc 1 P28161 83.87 1e-138 X-RAY
 1994-01-31 ARG A:186 A:186 68.0 0.302 H -54.8 -44.1 68.0 0.302 0.0
ARG B:186 B:186 82.0 0.364 H -61.3 -40.9 82.0 0.364 0.0
ARG C:186 C:186 83.0 0.369 H -61.5 -59.9 NA NA NA
ARG D:186 D:186 93.0 0.413 H -67.0 -41.8 NA NA NA
2dc5 1 30354091 81.57 6e-137 X-RAY
 2006-06-28 ARG A:194 A:194 82.0 0.364 H -60.8 -42.1 82.0 0.364 0.0 HOH
 2.747
 O
 O
ARG B:194 B:194 90.0 0.4 H -63.8 -45.1 90.0 0.4 0.0 HOH
 2.687
 O
 O
1b4p 1 P08010 80.65 6e-136 X-RAY
 2003-07-08 ARG A:186 A:186 88.0 0.391 H -65.9 -36.8 88.0 0.391 0.0 SO4
HOH
 9.835
2.834
 N
O
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09488-f1 1 P09488 100.0 1e-164 ARG A:187 A:187 109.0 0.484 H -65.1 -44.3
af-q03013-f1 1 Q03013 86.7 3e-145 ARG A:187 A:187 109.0 0.484 H -64.4 -44.0
af-p46439-f1 1 P46439 87.61 6e-142 ARG A:187 A:187 112.0 0.498 H -61.9 -44.8
af-p28161-f1 1 P28161 84.4 3e-141 ARG A:187 A:187 75.0 0.333 H -64.6 -40.9