Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110255244 . C A CCDS811.1:NM_000851.3:c.41gCc>gAc_NP_000842.2:p.14A>D Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ALA A:14 A:13 0.0 0.0 G -89.4 -10.3 0.0 0.0 0.0 GSH
HOH
 7.648
4.524
 N
C
 SG2
O
ALA B:14 B:13 0.0 0.0 G -93.1 -11.8 0.0 0.0 0.0 GSH
HOH
 7.557
4.377
 N
C
 SG2
O
ALA C:14 C:13 0.0 0.0 G -89.7 -13.1 NA NA NA
ALA D:14 D:13 0.0 0.0 G -89.8 -13.5 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ALA A:14 A:13 0.0 0.0 H -71.2 -11.1 0.0 0.0 0.0 GDN
HOH
 7.252
4.198
 N
N
 O2B
O
ALA B:14 B:13 0.0 0.0 G -81.3 -21.0 NA NA NA
ALA C:14 C:13 0.0 0.0 H -76.0 -15.5 0.0 0.0 0.0 GDN
HOH
 6.836
4.381
 N
N
 O2B
O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 ALA A:14 A:13 0.0 0.0 H -76.6 -11.0 0.0 0.0 0.0 ZN
GSH
HOH
 8.124
7.227
4.388
 N
N
C
 ZN
SG2
O
ALA B:14 B:13 0.0 0.0 T -77.9 -15.9 0.0 0.0 0.0 ZN
GSH
HOH
 7.983
7.118
4.281
 N
N
N
 ZN
SG2
O
ALA C:14 C:13 0.0 0.0 T -85.2 -19.1 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 ALA A:14 A:13 0.0 0.0 G -95.2 -18.2 0.0 0.0 0.0 GTD
HOH
 7.086
6.219
 N
N
 O22
O
ALA B:14 B:13 0.0 0.0 G -96.6 -16.0 0.0 0.0 0.0 GTD
HOH
 7.086
5.125
 N
C
 O22
O
ALA C:14 C:13 0.0 0.0 G -96.0 -15.0 NA NA NA
ALA D:14 D:13 0.0 0.0 G -95.6 -14.3 NA NA NA
ALA E:14 E:13 0.0 0.0 G -98.7 -17.2 NA NA NA
ALA F:14 F:13 0.0 0.0 G -97.9 -14.9 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 ALA A:14 A:13 0.0 0.0 G -97.1 -9.0 0.0 0.0 0.0 HOH
 4.076
 N
 O
ALA B:14 B:13 0.0 0.0 G -96.4 -4.0 NA NA NA
ALA C:14 C:13 0.0 0.0 G -95.3 -8.2 NA NA NA
ALA D:14 D:13 0.0 0.0 G -94.7 -5.7 0.0 0.0 0.0 HOH
 4.119
 N
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 ALA A:13 A:13 0.0 0.0 G -93.7 -15.7 0.0 0.0 0.0 HOH
 5.264
 N
 O
ALA B:13 B:13 0.0 0.0 G -85.3 -16.5 0.0 0.0 0.0 HOH
 3.902
 N
 O
ALA C:13 C:13 0.0 0.0 G -91.3 -17.0 NA NA NA
ALA D:13 D:13 0.0 0.0 G -88.7 -11.4 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 ALA A:14 A:14 0.0 0.0 G -98.4 -8.0 0.0 0.0 0.0 GSO
HOH
 7.029
3.762
 N
N
 SG2
O
ALA B:14 B:14 0.0 0.0 G -96.8 -8.0 0.0 0.0 0.0 GSO
HOH
 6.873
3.781
 N
N
 SG2
O
ALA C:14 C:14 0.0 0.0 G -94.0 -9.2 NA NA NA
ALA D:14 D:14 0.0 0.0 G -96.5 -7.7 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 ALA A:21 A:21 0.0 0.0 G -103.6 0.3 0.0 0.0 0.0 HOH
 3.296
 C
 O
ALA B:21 B:21 0.0 0.0 -104.4 8.5 0.0 0.0 0.0 HOH
 3.474
 N
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 ALA A:13 A:13 0.0 0.0 H -71.7 -11.6 0.0 0.0 0.0
ALA B:13 B:13 0.0 0.0 G -85.4 -36.2 0.0 0.0 0.0
ALA C:13 C:13 0.0 0.0 T -75.0 -61.1 NA NA NA
ALA D:13 D:13 0.0 0.0 H -68.7 -14.7 NA NA NA
ALA E:13 E:13 0.0 0.0 G -82.0 -12.4 NA NA NA
ALA F:13 F:13 0.0 0.0 G -100.5 -26.2 NA NA NA
ALA G:13 G:13 0.0 0.0 G -104.9 -13.0 NA NA NA
ALA H:13 H:13 0.0 0.0 T -68.2 -16.2 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 ALA A:13 A:13 0.0 0.0 G -95.3 -8.4 0.0 0.0 0.0 GSH
HOH
 7.188
4.030
 N
N
 SG2
O
ALA B:13 B:13 0.0 0.0 G -91.4 -12.7 0.0 0.0 0.0 GSH
HOH
 7.045
3.946
 N
N
 SG2
O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 ALA A:13 A:13 0.0 0.0 T -84.7 -8.8 0.0 0.0 0.0 GDS
HOH
 6.404
3.607
 N
N
 OE3
O
ALA B:13 B:13 0.0 0.0 T -81.7 -10.9 0.0 0.0 0.0 GDS
HOH
 6.371
3.587
 N
N
 OE3
O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 ALA A:13 A:13 0.0 0.0 T -93.9 -15.8 0.0 0.0 0.0 GSM
HOH
 7.410
3.947
 N
N
 SG2
O
ALA B:13 B:13 0.0 0.0 T -95.5 -13.8 0.0 0.0 0.0 GSM
HOH
 7.374
5.300
 N
CB
 SG2
O
ALA C:13 C:13 0.0 0.0 T -92.6 -13.4 NA NA NA
ALA D:13 D:13 0.0 0.0 G -90.0 -14.3 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 ALA A:13 A:13 0.0 0.0 G -95.0 -15.2 0.0 0.0 0.0 HOH
 3.649
 N
 O
ALA B:13 B:13 0.0 0.0 G -97.2 -11.7 0.0 0.0 0.0 HOH
 4.954
 C
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 ALA A:13 A:13 0.0 0.0 G -90.0 -23.4 0.0 0.0 0.0 HOH
 6.044
 N
 O
ALA C:13 C:13 0.0 0.0 G -86.5 -19.0 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 ALA A:13 A:13 0.0 0.0 G -88.2 -8.2 0.0 0.0 0.0 BYG
HOH
 6.184
4.094
 N
C
 OA3
O
ALA B:13 B:13 0.0 0.0 G -96.8 -2.2 0.0 0.0 0.0 GSH
HOH
 7.169
4.165
 N
N
 SG2
O
ALA C:13 C:13 0.0 0.0 G -90.9 -19.2 NA NA NA
ALA D:13 D:13 0.0 0.0 G -82.9 -15.1 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 ALA A:13 A:13 0.0 0.0 G -100.1 -2.8 0.0 0.0 0.0 GSH
NNE
HOH
 7.005
6.864
3.745
 N
N
N
 SG2
CBN
O
ALA B:13 B:13 0.0 0.0 G -99.3 -6.8 0.0 0.0 0.0 GSH
NNE
HOH
 6.965
6.756
3.699
 N
N
N
 SG2
CAN
O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:13 A:13 0.0 0.0 G -84.3 -8.9 0.0 0.0 0.0 GDN
HOH
 7.544
4.034
 N
N
 SG2
O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:13 A:13 0.0 0.0 H -55.2 -1.5 0.0 0.0 0.0 GDN
 7.422
 N
 O11
ALA B:13 B:13 1.0 0.009 T -78.0 14.5 1.0 0.009 0.0 GDN
 7.803
 N
 SG2
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:13 A:13 0.0 0.0 H -76.8 -18.9 0.0 0.0 0.0 GDN
 7.453
 N
 O12
ALA B:13 B:13 0.0 0.0 H -55.5 -22.3 0.0 0.0 0.0 GDN
 7.128
 N
 O2
ALA C:13 C:13 0.0 0.0 G -81.3 -0.7 NA NA NA
ALA D:13 D:13 1.0 0.009 H -81.3 -18.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 ALA A:14 A:14 0.0 0.0 G -91.0 -5.4
af-p09488-f1 1 P09488 87.61 6e-142 ALA A:14 A:14 0.0 0.0 G -92.4 -5.9
af-q03013-f1 1 Q03013 83.03 1e-134 ALA A:14 A:14 0.0 0.0 G -91.9 -5.7
af-p28161-f1 1 P28161 81.19 6e-134 ALA A:14 A:14 0.0 0.0 G -87.5 -5.7