Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110256158 . T A CCDS811.1:NM_000851.3:c.230cTg>cAg_NP_000842.2:p.77L>Q Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LEU A:77 A:76 2.0 0.012 H -60.6 -44.3 2.0 0.012 0.0 GSH
HOH
 8.156
3.905
 CD1
CD1
 O11
O
LEU B:77 B:76 2.0 0.012 H -60.8 -43.4 2.0 0.012 0.0 GSH
HOH
 8.331
4.029
 CD1
CD1
 O11
O
LEU C:77 C:76 2.0 0.012 H -62.1 -42.8 NA NA NA
LEU D:77 D:76 2.0 0.012 H -62.7 -42.2 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LEU A:77 A:76 1.0 0.006 H -63.2 -48.7 1.0 0.006 0.0 GDN
HOH
 8.722
5.662
 CD1
CD1
 O11
O
LEU B:77 B:76 1.0 0.006 H -61.5 -48.8 NA NA NA
LEU C:77 C:76 1.0 0.006 H -60.1 -46.9 1.0 0.006 0.0 GDN
HOH
 8.584
5.439
 CD1
CD1
 O11
O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 LEU A:77 A:76 1.0 0.006 H -61.4 -48.1 1.0 0.006 0.0 GSH
HOH
 8.242
4.072
 CD1
CD1
 O11
O
LEU B:77 B:76 1.0 0.006 H -59.4 -45.9 1.0 0.006 0.0 GSH
HOH
 7.867
4.181
 CD1
CD1
 O11
O
LEU C:77 C:76 2.0 0.012 H -59.2 -48.2 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 LEU A:77 A:76 1.0 0.006 H -55.4 -47.6 1.0 0.006 0.0 GTD
HOH
 8.186
4.027
 CD1
CD1
 O12
O
LEU B:77 B:76 2.0 0.012 H -57.6 -49.7 2.0 0.012 0.0 GTD
HOH
 7.989
9.094
 CD1
CD1
 O12
O
LEU C:77 C:76 1.0 0.006 H -58.8 -51.4 NA NA NA
LEU D:77 D:76 1.0 0.006 H -59.5 -50.5 NA NA NA
LEU E:77 E:76 1.0 0.006 H -58.3 -46.7 NA NA NA
LEU F:77 F:76 1.0 0.006 H -58.4 -49.1 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 LEU A:77 A:76 1.0 0.006 H -60.7 -44.5 1.0 0.006 0.0 NA
HOH
 6.868
4.008
 O
CD1
 NA
O
LEU B:77 B:76 1.0 0.006 H -59.9 -43.9 NA NA NA
LEU C:77 C:76 1.0 0.006 H -61.2 -45.0 NA NA NA
LEU D:77 D:76 1.0 0.006 H -61.0 -46.0 1.0 0.006 0.0 HOH
 4.018
 CD1
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 LEU A:76 A:76 2.0 0.012 H -54.1 -49.9 2.0 0.012 0.0 HOH
 4.128
 CD1
 O
LEU B:76 B:76 1.0 0.006 H -56.8 -46.4 1.0 0.006 0.0 HOH
 6.762
 C
 O
LEU C:76 C:76 1.0 0.006 H -53.6 -56.4 NA NA NA
LEU D:76 D:76 2.0 0.012 H -59.9 -47.0 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 LEU A:77 A:77 1.0 0.006 H -58.4 -47.4 1.0 0.006 0.0 GSO
HOH
 8.170
3.779
 CD1
CD1
 OT1
O
LEU B:77 B:77 5.0 0.029 H -61.4 -45.8 5.0 0.029 0.0 GSO
HOH
 8.107
3.754
 CD1
CD1
 OT1
O
LEU C:77 C:77 4.0 0.024 H -58.0 -46.6 NA NA NA
LEU D:77 D:77 4.0 0.024 H -58.6 -47.2 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 LEU A:84 A:84 3.0 0.018 H -65.3 -37.4 3.0 0.018 0.0 HOH
 3.940
 CD1
 O
LEU B:84 B:84 3.0 0.018 H -64.2 -39.6 3.0 0.018 0.0 HOH
 3.905
 CD1
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 LEU A:76 A:76 3.0 0.018 H -58.5 -49.5 3.0 0.018 0.0
LEU B:76 B:76 2.0 0.012 H -58.3 -55.8 2.0 0.012 0.0
LEU C:76 C:76 1.0 0.006 H -73.0 -47.4 NA NA NA
LEU D:76 D:76 1.0 0.006 H -57.7 -49.5 NA NA NA
LEU E:76 E:76 3.0 0.018 H -63.4 -52.9 NA NA NA
LEU F:76 F:76 2.0 0.012 H -51.5 -57.6 NA NA NA
LEU G:76 G:76 3.0 0.018 H -59.4 -56.5 NA NA NA
LEU H:76 H:76 1.0 0.006 H -59.6 -57.0 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 LEU A:76 A:76 3.0 0.018 H -61.3 -43.1 3.0 0.018 0.0 GSH
HOH
 8.228
3.665
 CD1
CD1
 O12
O
LEU B:76 B:76 4.0 0.024 H -64.2 -45.1 4.0 0.024 0.0 GSH
HOH
 8.256
3.705
 CD1
CD1
 O12
O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 LEU A:76 A:76 4.0 0.024 H -67.5 -47.2 4.0 0.024 0.0 GDS
HOH
 8.324
3.758
 CD1
CD1
 OE7
O
LEU B:76 B:76 4.0 0.024 H -65.5 -49.1 4.0 0.024 0.0 GDS
HOH
 8.116
3.557
 CD1
CD1
 OE7
O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 LEU A:76 A:76 2.0 0.012 H -62.1 -43.6 2.0 0.012 0.0 GSM
HOH
 7.895
5.979
 CD1
CD1
 O12
O
LEU B:76 B:76 3.0 0.018 H -61.9 -45.5 3.0 0.018 0.0 GSM
HOH
 8.102
6.440
 CD1
C
 O12
O
LEU C:76 C:76 2.0 0.012 H -58.2 -41.7 NA NA NA
LEU D:76 D:76 2.0 0.012 H -57.8 -45.0 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 LEU A:76 A:76 1.0 0.006 H -55.2 -49.5 1.0 0.006 0.0 HOH
 3.828
 CD1
 O
LEU B:76 B:76 1.0 0.006 H -59.9 -53.0 1.0 0.006 0.0 HOH
 3.910
 CD1
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 LEU A:76 A:76 4.0 0.024 H -65.5 -45.2 4.0 0.024 0.0 HOH
 4.113
 CD1
 O
LEU C:76 C:76 4.0 0.024 H -59.1 -52.4 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 LEU A:76 A:76 4.0 0.024 H -58.2 -50.0 4.0 0.024 0.0 BYG
HOH
 8.134
3.655
 CD1
CD1
 O11
O
LEU B:76 B:76 2.0 0.012 H -58.0 -53.3 2.0 0.012 0.0 GSH
HOH
 8.265
3.906
 CD1
CD1
 O11
O
LEU C:76 C:76 4.0 0.024 H -59.4 -46.2 NA NA NA
LEU D:76 D:76 4.0 0.024 H -59.6 -38.5 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 LEU A:76 A:76 4.0 0.024 H -56.9 -45.9 4.0 0.024 0.0 GSH
HOH
 8.262
3.673
 CD1
CD1
 O11
O
LEU B:76 B:76 4.0 0.024 H -59.7 -43.8 4.0 0.024 0.0 GSH
HOH
 8.320
3.708
 CD1
CD1
 O12
O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:76 A:76 4.0 0.024 H -59.5 -46.8 4.0 0.024 0.0 GDN
HOH
 8.365
3.986
 CD1
CD1
 O11
O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:76 A:76 2.0 0.012 H -58.6 -52.4 2.0 0.012 0.0 GDN
 8.631
 CD1
 O12
LEU B:76 B:76 2.0 0.012 H -65.4 -51.9 2.0 0.012 0.0 GDN
 8.481
 CD1
 N1
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:76 A:76 0.0 0.0 H -57.7 -52.1 0.0 0.0 0.0 GDN
 7.987
 CD1
 O11
LEU B:76 B:76 0.0 0.0 H -52.7 -52.3 0.0 0.0 0.0 GDN
 8.382
 CD1
 O11
LEU C:76 C:76 1.0 0.006 H -80.8 -25.5 NA NA NA
LEU D:76 D:76 4.0 0.024 H -61.1 -41.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 LEU A:77 A:77 1.0 0.006 H -58.6 -49.0
af-p09488-f1 1 P09488 87.61 6e-142 LEU A:77 A:77 1.0 0.006 H -58.8 -50.1
af-q03013-f1 1 Q03013 83.03 1e-134 LEU A:77 A:77 1.0 0.006 H -58.5 -49.8
af-p28161-f1 1 P28161 81.19 6e-134 LEU A:77 A:77 4.0 0.024 H -59.7 -49.3