Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110256354 . C A CCDS811.1:NM_000851.3:c.331Ctg>Atg_NP_000842.2:p.111L>M Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LEU A:111 A:110 1.0 0.006 H -71.1 -46.0 1.0 0.006 0.0 HOH
 4.678
 N
 O
LEU B:111 B:110 1.0 0.006 H -72.3 -47.9 1.0 0.006 0.0 HOH
 4.142
 N
 O
LEU C:111 C:110 1.0 0.006 H -70.1 -48.2 NA NA NA
LEU D:111 D:110 1.0 0.006 H -71.7 -46.7 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LEU A:111 A:110 1.0 0.006 H -61.7 -51.4 1.0 0.006 0.0 GDN
HOH
 6.333
6.319
 O
C
 O4B
O
LEU B:111 B:110 1.0 0.006 H -61.9 -49.0 NA NA NA
LEU C:111 C:110 2.0 0.012 H -59.9 -50.2 2.0 0.012 0.0 GDN
HOH
 5.958
6.415
 O
C
 O4B
O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 LEU A:111 A:110 0.0 0.0 H -69.5 -56.1 0.0 0.0 0.0 ZN
HOH
 9.689
5.294
 C
N
 ZN
O
LEU B:111 B:110 0.0 0.0 H -69.2 -55.0 0.0 0.0 0.0 ZN
HOH
 9.571
5.685
 C
N
 ZN
O
LEU C:111 C:110 0.0 0.0 H -69.2 -53.6 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 LEU A:111 A:110 0.0 0.0 H -60.6 -53.0 0.0 0.0 0.0 GTD
HOH
 6.272
9.006
 C
CD2
 O41
O
LEU B:111 B:110 0.0 0.0 H -57.6 -52.8 0.0 0.0 0.0 GTD
HOH
 6.033
3.843
 C
N
 O41
O
LEU C:111 C:110 1.0 0.006 H -57.0 -52.1 NA NA NA
LEU D:111 D:110 1.0 0.006 H -58.4 -49.7 NA NA NA
LEU E:111 E:110 0.0 0.0 H -57.6 -51.5 NA NA NA
LEU F:111 F:110 1.0 0.006 H -60.1 -51.2 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 LEU A:111 A:110 0.0 0.0 H -71.6 -41.4 0.0 0.0 0.0 HOH
 4.000
 N
 O
LEU B:111 B:110 0.0 0.0 H -64.9 -46.1 NA NA NA
LEU C:111 C:110 0.0 0.0 H -63.0 -40.6 NA NA NA
LEU D:111 D:110 0.0 0.0 H -67.3 -42.4 0.0 0.0 0.0 HOH
 4.089
 N
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 LEU A:110 A:110 0.0 0.0 H -62.1 -48.5 0.0 0.0 0.0 HOH
 7.300
 C
 O
LEU B:110 B:110 0.0 0.0 H -57.3 -45.0 0.0 0.0 0.0 HOH
 6.712
 CD2
 O
LEU C:110 C:110 1.0 0.006 H -67.2 -44.9 NA NA NA
LEU D:110 D:110 0.0 0.0 H -63.9 -48.2 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 LEU A:111 A:111 3.0 0.018 H -70.0 -42.3 3.0 0.018 0.0 GSO
HOH
 9.672
3.599
 C
CB
 OF2
O
LEU B:111 B:111 2.0 0.012 H -65.7 -44.9 2.0 0.012 0.0 GSO
HOH
 9.714
3.402
 C
CD2
 OF2
O
LEU C:111 C:111 4.0 0.024 H -68.9 -46.6 NA NA NA
LEU D:111 D:111 4.0 0.024 H -71.0 -43.6 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 LEU A:118 A:118 1.0 0.006 H -68.5 -42.4 1.0 0.006 0.0 HOH
 3.594
 CD2
 O
LEU B:118 B:118 0.0 0.0 H -64.9 -39.5 0.0 0.0 0.0 HOH
 3.704
 CB
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 LEU A:110 A:110 1.0 0.006 H -72.8 -34.3 1.0 0.006 0.0
LEU B:110 B:110 3.0 0.018 H -66.7 -35.1 3.0 0.018 0.0
LEU C:110 C:110 2.0 0.012 H -69.5 -58.1 NA NA NA
LEU D:110 D:110 0.0 0.0 H -93.8 -44.8 NA NA NA
LEU E:110 E:110 2.0 0.012 H -80.4 -49.1 NA NA NA
LEU F:110 F:110 0.0 0.0 H -72.4 -41.1 NA NA NA
LEU G:110 G:110 0.0 0.0 H -82.0 -40.6 NA NA NA
LEU H:110 H:110 0.0 0.0 H -68.7 -54.5 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 LEU A:110 A:110 1.0 0.006 H -70.0 -43.2 1.0 0.006 0.0 HOH
 3.565
 CB
 O
LEU B:110 B:110 2.0 0.012 H -64.2 -45.0 2.0 0.012 0.0 HOH
 3.552
 CB
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 LEU A:110 A:110 0.0 0.0 H -66.0 -44.5 0.0 0.0 0.0 GDS
HOH
 6.279
3.929
 C
CB
 OE4
O
LEU B:110 B:110 0.0 0.0 H -68.4 -45.6 0.0 0.0 0.0 GDS
HOH
 6.266
3.922
 C
CB
 OE4
O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 LEU A:110 A:110 1.0 0.006 H -66.4 -40.7 1.0 0.006 0.0 HOH
 5.318
 N
 O
LEU B:110 B:110 1.0 0.006 H -66.7 -37.9 1.0 0.006 0.0 HOH
 3.750
 CB
 O
LEU C:110 C:110 1.0 0.006 H -66.6 -38.1 NA NA NA
LEU D:110 D:110 0.0 0.0 H -62.3 -39.4 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 LEU A:110 A:110 4.0 0.024 H -71.8 -42.2 4.0 0.024 0.0 HOH
 3.584
 CB
 O
LEU B:110 B:110 4.0 0.024 H -67.5 -46.7 4.0 0.024 0.0 HOH
 4.026
 CB
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 LEU A:110 A:110 4.0 0.024 H -70.5 -45.1 4.0 0.024 0.0 HOH
 7.451
 O
 O
LEU C:110 C:110 4.0 0.024 H -76.0 -44.9 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 LEU A:110 A:110 1.0 0.006 H -67.6 -37.6 1.0 0.006 0.0 BYG
HOH
 6.147
6.472
 C
N
 OA4
O
LEU B:110 B:110 1.0 0.006 H -69.6 -42.4 1.0 0.006 0.0 HOH
 4.093
 CB
 O
LEU C:110 C:110 2.0 0.012 H -70.2 -42.7 NA NA NA
LEU D:110 D:110 1.0 0.006 H -70.5 -50.4 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 LEU A:110 A:110 1.0 0.006 H -65.9 -44.6 1.0 0.006 0.0 NNE
HOH
 7.433
3.735
 C
CB
 CL4
O
LEU B:110 B:110 1.0 0.006 H -67.1 -43.1 1.0 0.006 0.0 NNE
HOH
 7.353
3.842
 C
CB
 CL1
O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:110 A:110 6.0 0.035 H -76.0 -43.9 6.0 0.035 0.0 HOH
 3.665
 CB
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:110 A:110 5.0 0.029 H -66.7 -45.7 5.0 0.029 0.0
LEU B:110 B:110 0.0 0.0 H -62.2 -60.3 0.0 0.0 0.0 GDN
 9.866
 C
 SG2
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LEU A:110 A:110 10.0 0.059 H -63.3 -46.0 10.0 0.059 0.0
LEU B:110 B:110 6.0 0.035 H -62.0 -42.4 6.0 0.035 0.0 GDN
 8.781
 C
 SG2
LEU C:110 C:110 5.0 0.029 H -76.8 -54.4 NA NA NA
LEU D:110 D:110 7.0 0.041 H -60.6 -46.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 LEU A:111 A:111 0.0 0.0 H -65.8 -39.7
af-p09488-f1 1 P09488 87.61 6e-142 LEU A:111 A:111 0.0 0.0 H -64.7 -43.5
af-q03013-f1 1 Q03013 83.03 1e-134 LEU A:111 A:111 0.0 0.0 H -63.3 -42.7
af-p28161-f1 1 P28161 81.19 6e-134 LEU A:111 A:111 2.0 0.012 H -64.9 -41.7