Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110257647 . T A CCDS811.1:NM_000851.3:c.439Tgg>Agg_NP_000842.2:p.147W>R Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 TRP A:147 A:146 27.0 0.106 S -127.1 161.5 27.0 0.106 0.0 HOH
 3.425
 NE1
 O
TRP B:147 B:146 26.0 0.102 S -125.9 163.1 26.0 0.102 0.0 HOH
 3.640
 CB
 O
TRP C:147 C:146 28.0 0.11 S -125.1 162.0 NA NA NA
TRP D:147 D:146 27.0 0.106 S -128.5 161.4 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 TRP A:147 A:146 27.0 0.106 S -136.8 164.8 27.0 0.106 0.0 HOH
 8.267
 NE1
 O
TRP B:147 B:146 28.0 0.11 S -135.6 158.0 NA NA NA
TRP C:147 C:146 26.0 0.102 S -137.1 163.8 26.0 0.102 0.0 HOH
 3.347
 NE1
 O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 TRP A:147 A:146 26.0 0.102 S -129.4 166.8 26.0 0.102 0.0 HOH
 5.823
 N
 O
TRP B:147 B:146 26.0 0.102 S -129.5 164.3 26.0 0.102 0.0 HOH
 6.233
 N
 O
TRP C:147 C:146 27.0 0.106 S -128.9 162.7 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 TRP A:147 A:146 25.0 0.098 S -138.8 166.9 25.0 0.098 0.0 HOH
 9.323
 CB
 O
TRP B:147 B:146 26.0 0.102 S -138.5 166.4 26.0 0.102 0.0 HOH
 3.278
 CB
 O
TRP C:147 C:146 26.0 0.102 S -140.4 164.5 NA NA NA
TRP D:147 D:146 26.0 0.102 S -138.4 165.7 NA NA NA
TRP E:147 E:146 26.0 0.102 S -138.3 166.8 NA NA NA
TRP F:147 F:146 25.0 0.098 S -139.1 167.1 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 TRP A:147 A:146 26.0 0.102 B -138.7 164.4 26.0 0.102 0.0 HOH
 3.186
 NE1
 O
TRP B:147 B:146 27.0 0.106 B -134.0 165.1 NA NA NA
TRP C:147 C:146 25.0 0.098 B -135.5 162.2 NA NA NA
TRP D:147 D:146 29.0 0.114 B -137.7 165.4 29.0 0.114 0.0 HOH
 3.179
 NE1
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 TRP A:146 A:146 28.0 0.11 B -145.4 148.0 28.0 0.11 0.0
TRP B:146 B:146 32.0 0.125 B -134.5 152.9 32.0 0.125 0.0
TRP C:146 C:146 27.0 0.106 S -141.3 158.1 NA NA NA
TRP D:146 D:146 27.0 0.106 B -134.5 149.8 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 TRP A:147 A:147 24.0 0.094 B -134.4 163.7 24.0 0.094 0.0 HOH
 3.468
 CB
 O
TRP B:147 B:147 21.0 0.082 B -130.4 163.8 21.0 0.082 0.0 HOH
 2.795
 NE1
 O
TRP C:147 C:147 23.0 0.09 B -132.6 164.0 NA NA NA
TRP D:147 D:147 22.0 0.086 B -131.8 164.1 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 TRP A:154 A:154 29.0 0.114 B -129.9 160.3 29.0 0.114 0.0 HOH
 3.460
 CB
 O
TRP B:154 B:154 26.0 0.102 B -132.2 159.6 26.0 0.102 0.0 HOH
 2.897
 NE1
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 TRP A:146 A:146 28.0 0.11 B -123.3 134.2 28.0 0.11 0.0
TRP B:146 B:146 31.0 0.122 B -118.6 131.8 31.0 0.122 0.0
TRP C:146 C:146 32.0 0.125 B -95.1 151.1 NA NA NA
TRP D:146 D:146 29.0 0.114 B -127.4 145.9 NA NA NA
TRP E:146 E:146 32.0 0.125 B -123.5 136.6 NA NA NA
TRP F:146 F:146 34.0 0.133 B -90.6 126.5 NA NA NA
TRP G:146 G:146 31.0 0.122 B -129.3 136.7 NA NA NA
TRP H:146 H:146 34.0 0.133 B -124.9 138.7 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 TRP A:146 A:146 22.0 0.086 B -123.5 163.1 22.0 0.086 0.0 HOH
 3.577
 CB
 O
TRP B:146 B:146 22.0 0.086 B -129.9 163.6 22.0 0.086 0.0 HOH
 3.472
 CB
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 TRP A:146 A:146 23.0 0.09 B -125.4 149.7 23.0 0.09 0.0 HOH
 2.988
 NE1
 O
TRP B:146 B:146 27.0 0.106 B -125.9 161.7 27.0 0.106 0.0 HOH
 3.560
 CB
 O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 TRP A:146 A:146 25.0 0.098 B -128.0 162.0 25.0 0.098 0.0 HOH
 7.622
 O
 O
TRP B:146 B:146 23.0 0.09 B -127.2 161.2 23.0 0.09 0.0 HOH
 3.255
 NE1
 O
TRP C:146 C:146 25.0 0.098 B -126.7 160.5 NA NA NA
TRP D:146 D:146 22.0 0.086 B -124.2 163.3 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 TRP A:146 A:146 22.0 0.086 B -134.2 165.3 22.0 0.086 0.0 HOH
 3.772
 CB
 O
TRP B:146 B:146 24.0 0.094 B -133.1 165.8 24.0 0.094 0.0 HOH
 3.645
 CB
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 TRP A:146 A:146 24.0 0.094 B -135.0 154.0 24.0 0.094 0.0
TRP C:146 C:146 21.0 0.082 B -134.9 160.5 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 TRP A:146 A:146 26.0 0.102 B -133.3 165.3 26.0 0.102 0.0 HOH
 3.681
 CB
 O
TRP B:146 B:146 25.0 0.098 B -140.6 165.3 25.0 0.098 0.0 HOH
 3.509
 CB
 O
TRP C:146 C:146 23.0 0.09 B -134.1 161.6 NA NA NA
TRP D:146 D:146 23.0 0.09 B -139.1 160.2 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 TRP A:146 A:146 26.0 0.102 B -129.8 158.3 26.0 0.102 0.0 HOH
 2.881
 NE1
 O
TRP B:146 B:146 22.0 0.086 B -128.8 157.5 22.0 0.086 0.0 HOH
 2.872
 NE1
 O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 TRP A:146 A:146 24.0 0.094 B -127.9 164.3 24.0 0.094 0.0 HOH
 3.360
 CB
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 TRP A:146 A:146 37.0 0.145 B -130.3 143.6 37.0 0.145 0.0
TRP B:146 B:146 28.0 0.11 B -119.0 147.4 28.0 0.11 0.0
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 TRP A:146 A:146 25.0 0.098 B -126.7 157.7 25.0 0.098 0.0
TRP B:146 B:146 24.0 0.094 B -128.2 159.1 24.0 0.094 0.0
TRP C:146 C:146 28.0 0.11 B -135.3 170.1 NA NA NA
TRP D:146 D:146 26.0 0.102 B -120.5 156.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 TRP A:147 A:147 24.0 0.094 S -134.3 160.1
af-p09488-f1 1 P09488 87.61 6e-142 TRP A:147 A:147 24.0 0.094 S -133.0 160.4
af-q03013-f1 1 Q03013 83.03 1e-134 TRP A:147 A:147 24.0 0.094 S -128.7 158.1
af-p28161-f1 1 P28161 81.19 6e-134 TRP A:147 A:147 25.0 0.098 B -133.5 159.6