Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110257662 . A C CCDS811.1:NM_000851.3:c.454Aag>Cag_NP_000842.2:p.152K>Q Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LYS A:152 A:151 131.0 0.655 S -111.0 150.1 131.0 0.655 0.0 HOH
 2.748
 O
 O
LYS B:152 B:151 43.0 0.215 S -110.1 151.4 43.0 0.215 0.0 HOH
 2.689
 O
 O
LYS C:152 C:151 95.0 0.475 S -109.5 151.1 NA NA NA
LYS D:152 D:151 42.0 0.21 S -109.7 153.9 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 LYS A:152 A:151 121.0 0.605 S -108.0 147.9 121.0 0.605 0.0 HOH
 7.318
 CB
 O
LYS B:152 B:151 119.0 0.595 S -108.9 142.4 NA NA NA
LYS C:152 C:151 121.0 0.605 S -108.1 147.6 121.0 0.605 0.0 HOH
 5.996
 CA
 O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 LYS A:152 A:151 47.0 0.235 S -104.2 142.8 47.0 0.235 0.0 HOH
 4.539
 N
 O
LYS B:152 B:151 119.0 0.595 S -102.5 143.2 119.0 0.595 0.0
LYS C:152 C:151 40.0 0.2 S -103.0 143.0 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 LYS A:152 A:151 112.0 0.56 S -98.2 142.2 112.0 0.56 0.0 HOH
 4.579
 CB
 O
LYS B:152 B:151 109.0 0.545 S -100.2 136.1 109.0 0.545 0.0 HOH
 2.632
 O
 O
LYS C:152 C:151 110.0 0.55 S -98.5 139.4 NA NA NA
LYS D:152 D:151 114.0 0.57 S -96.3 139.6 NA NA NA
LYS E:152 E:151 110.0 0.55 S -99.7 140.2 NA NA NA
LYS F:152 F:151 112.0 0.56 S -99.5 135.9 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 LYS A:152 A:151 72.0 0.36 S -123.4 145.0 72.0 0.36 0.0 HOH
 2.696
 O
 O
LYS B:152 B:151 120.0 0.6 S -125.1 140.8 NA NA NA
LYS C:152 C:151 109.0 0.545 S -118.8 143.8 NA NA NA
LYS D:152 D:151 95.0 0.475 S -119.4 140.4 95.0 0.475 0.0 HOH
 2.606
 CG
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 LYS A:151 A:151 66.0 0.33 S -129.0 142.6 66.0 0.33 0.0
LYS B:151 B:151 60.0 0.3 S -123.4 143.4 60.0 0.3 0.0
LYS C:151 C:151 67.0 0.335 S -116.0 137.9 NA NA NA
LYS D:151 D:151 65.0 0.325 S -122.6 148.0 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 LYS A:152 A:152 53.0 0.265 S -110.1 127.8 53.0 0.265 0.0 HOH
 2.770
 O
 O
LYS B:152 B:152 58.0 0.29 S -109.1 130.7 58.0 0.29 0.0 HOH
 2.779
 O
 O
LYS C:152 C:152 70.0 0.35 S -103.7 126.4 NA NA NA
LYS D:152 D:152 66.0 0.33 S -101.8 127.4 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 LYS A:159 A:159 122.0 0.61 S -119.9 143.7 122.0 0.61 0.0 HOH
 2.622
 NZ
 O
LYS B:159 B:159 126.0 0.63 S -125.1 146.1 126.0 0.63 0.0 HOH
 2.597
 NZ
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 LYS A:151 A:151 74.0 0.37 S -107.6 160.9 74.0 0.37 0.0
LYS B:151 B:151 49.0 0.245 S -107.9 144.6 49.0 0.245 0.0
LYS C:151 C:151 71.0 0.355 S -96.1 134.5 NA NA NA
LYS D:151 D:151 88.0 0.44 S -105.5 144.6 NA NA NA
LYS E:151 E:151 45.0 0.225 S -119.9 143.0 NA NA NA
LYS F:151 F:151 35.0 0.175 S -90.9 152.6 NA NA NA
LYS G:151 G:151 51.0 0.255 S -121.9 154.9 NA NA NA
LYS H:151 H:151 59.0 0.295 S -98.0 142.5 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 LYS A:151 A:151 58.0 0.29 S -107.6 138.4 58.0 0.29 0.0 HOH
 2.724
 CG
 O
LYS B:151 B:151 49.0 0.245 S -108.2 136.9 49.0 0.245 0.0 HOH
 2.686
 O
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 LYS A:151 A:151 41.0 0.205 S -109.0 143.1 41.0 0.205 0.0 HOH
 2.825
 CG
 O
LYS B:151 B:151 47.0 0.235 S -92.9 136.6 47.0 0.235 0.0 HOH
 3.149
 O
 O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 LYS A:151 A:151 55.0 0.275 S -104.4 138.3 55.0 0.275 0.0 HOH
 4.271
 N
 O
LYS B:151 B:151 51.0 0.255 S -104.5 139.8 51.0 0.255 0.0 HOH
 4.142
 CA
 O
LYS C:151 C:151 51.0 0.255 S -103.2 139.0 NA NA NA
LYS D:151 D:151 56.0 0.28 S -103.1 143.2 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 LYS A:151 A:151 60.0 0.3 S -94.1 135.0 60.0 0.3 0.0 HOH
 2.681
 O
 O
LYS B:151 B:151 53.0 0.265 S -99.6 134.7 53.0 0.265 0.0 HOH
 2.819
 O
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 LYS A:151 A:151 94.0 0.47 S -92.1 134.5 94.0 0.47 0.0
LYS C:151 C:151 92.0 0.46 S -84.9 130.0 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 LYS A:151 A:151 146.0 0.73 S -126.5 150.2 146.0 0.73 0.0 HOH
 2.905
 O
 O
LYS B:151 B:151 46.0 0.23 S -100.6 119.2 46.0 0.23 0.0 HOH
 2.770
 O
 O
LYS C:151 C:151 59.0 0.295 S -121.8 134.5 NA NA NA
LYS D:151 D:151 58.0 0.29 S -108.3 151.3 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 LYS A:151 A:151 62.0 NA S -113.4 134.7 62.0 NA NA HOH
 2.752
 O
 O
LYS B:151 B:151 75.0 0.375 S -117.0 135.9 75.0 0.375 0.0 HOH
 2.358
 CE
 O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LYS A:151 A:151 64.0 0.32 S -122.3 148.5 64.0 0.32 0.0 HOH
 2.699
 O
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LYS A:151 A:151 63.0 0.315 S -130.5 144.1 63.0 0.315 0.0
LYS B:151 B:151 53.0 0.265 S -142.4 130.6 53.0 0.265 0.0
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 LYS A:151 A:151 55.0 0.275 B -89.3 122.8 55.0 0.275 0.0
LYS B:151 B:151 156.0 0.78 S -119.9 138.6 156.0 0.78 0.0
LYS C:151 C:151 48.0 0.24 S -65.6 156.8 NA NA NA
LYS D:151 D:151 41.0 0.205 S -137.2 148.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 LYS A:152 A:152 109.0 0.545 S -107.1 144.3
af-p09488-f1 1 P09488 87.61 6e-142 LYS A:152 A:152 110.0 0.55 S -108.4 145.7
af-q03013-f1 1 Q03013 83.03 1e-134 LYS A:152 A:152 111.0 0.555 S -105.6 143.1
af-p28161-f1 1 P28161 81.19 6e-134 LYS A:152 A:152 76.0 0.38 S -111.3 136.1