Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110257825 . C A CCDS811.1:NM_000851.3:c.530gCc>gAc_NP_000842.2:p.177A>D Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ALA A:177 A:176 78.0 0.678 T -72.6 -9.0 78.0 0.678 0.0 HOH
 2.620
 N
 O
ALA B:177 B:176 77.0 0.67 T -73.4 -7.1 77.0 0.67 0.0 HOH
 2.947
 N
 O
ALA C:177 C:176 78.0 0.678 T -72.0 -8.4 NA NA NA
ALA D:177 D:176 77.0 0.67 T -71.9 -10.8 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ALA A:177 A:176 75.0 0.652 G -80.8 -5.5 75.0 0.652 0.0
ALA B:177 B:176 79.0 0.687 G -78.8 -3.0 NA NA NA
ALA C:177 C:176 75.0 0.652 G -84.2 -3.3 75.0 0.652 0.0 HOH
 5.341
 N
 O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 ALA A:177 A:176 78.0 0.678 T -73.7 -10.0 78.0 0.678 0.0 HOH
 9.590
 N
 O
ALA B:177 B:176 76.0 0.661 T -76.8 -10.2 76.0 0.661 0.0 HOH
 4.593
 CB
 O
ALA C:177 C:176 76.0 0.661 T -73.6 -7.5 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 ALA A:177 A:176 77.0 0.67 T -77.6 2.7 77.0 0.67 0.0
ALA B:177 B:176 80.0 0.696 T -78.6 3.4 80.0 0.696 0.0
ALA C:177 C:176 79.0 0.687 T -71.7 -0.9 NA NA NA
ALA D:177 D:176 82.0 0.713 T -61.7 5.2 NA NA NA
ALA E:177 E:176 75.0 0.652 T -90.6 24.1 NA NA NA
ALA F:177 F:176 75.0 0.652 T -84.5 3.1 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 ALA A:177 A:176 79.0 0.687 T -72.4 -4.2 79.0 0.687 0.0 HOH
 2.953
 N
 O
ALA B:177 B:176 77.0 0.67 T -76.3 -1.1 NA NA NA
ALA C:177 C:176 78.0 0.678 T -72.1 -8.0 NA NA NA
ALA D:177 D:176 77.0 0.67 T -77.6 -1.6 77.0 0.67 0.0 HOH
 2.571
 N
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 ALA A:176 A:176 81.0 0.704 T -69.6 1.1 81.0 0.704 0.0
ALA B:176 B:176 79.0 0.687 G -68.8 -7.7 79.0 0.687 0.0
ALA C:176 C:176 81.0 0.704 T -74.6 5.0 NA NA NA
ALA D:176 D:176 75.0 0.652 G -72.1 -13.8 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 ALA A:177 A:177 77.0 0.67 T -72.4 -9.5 77.0 0.67 0.0 HOH
 2.800
 O
 O
ALA B:177 B:177 81.0 0.704 T -76.2 -2.5 81.0 0.704 0.0 HOH
 2.685
 O
 O
ALA C:177 C:177 77.0 0.67 T -70.7 -10.9 NA NA NA
ALA D:177 D:177 77.0 0.67 T -75.7 -8.4 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 ALA A:184 A:184 76.0 0.661 T -82.5 -3.8 76.0 0.661 0.0 HOH
 3.006
 N
 O
ALA B:184 B:184 80.0 0.696 T -78.3 -1.6 80.0 0.696 0.0 HOH
 2.788
 N
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 ALA A:176 A:176 65.0 0.565 T -141.3 -24.1 65.0 0.565 0.0
ALA B:176 B:176 78.0 0.678 G -70.4 -4.6 78.0 0.678 0.0
ALA C:176 C:176 79.0 0.687 G -69.2 -15.5 NA NA NA
ALA D:176 D:176 70.0 0.609 T -71.6 -12.3 NA NA NA
ALA E:176 E:176 79.0 0.687 T -62.4 -13.1 NA NA NA
ALA F:176 F:176 72.0 0.626 T -75.0 -12.8 NA NA NA
ALA G:176 G:176 72.0 0.626 G -83.8 -13.3 NA NA NA
ALA H:176 H:176 71.0 0.617 T -64.1 -22.8 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 ALA A:176 A:176 77.0 0.67 T -70.8 -8.2 77.0 0.67 0.0 HOH
 2.889
 N
 O
ALA B:176 B:176 80.0 0.696 T -65.5 -8.7 80.0 0.696 0.0 HOH
 2.683
 O
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 ALA A:176 A:176 76.0 0.661 T -80.4 -7.4 76.0 0.661 0.0 HOH
 2.725
 N
 O
ALA B:176 B:176 79.0 0.687 T -79.6 -1.3 79.0 0.687 0.0 HOH
 2.658
 O
 O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 ALA A:176 A:176 76.0 0.661 T -68.6 -8.7 76.0 0.661 0.0 HOH
 5.172
 O
 O
ALA B:176 B:176 80.0 0.696 T -73.5 -3.5 80.0 0.696 0.0 HOH
 2.854
 O
 O
ALA C:176 C:176 78.0 0.678 T -70.6 -3.4 NA NA NA
ALA D:176 D:176 78.0 0.678 T -77.6 -0.9 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 ALA A:176 A:176 77.0 0.67 G -78.2 -9.4 77.0 0.67 0.0
ALA B:176 B:176 78.0 0.678 G -77.2 -16.5 78.0 0.678 0.0
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 ALA A:176 A:176 81.0 0.704 T -68.1 -5.7 81.0 0.704 0.0
ALA C:176 C:176 79.0 0.687 T -66.2 -12.7 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 ALA A:176 A:176 79.0 0.687 T -72.2 -8.1 79.0 0.687 0.0 HOH
 3.221
 N
 O
ALA B:176 B:176 77.0 0.67 T -70.7 -3.2 77.0 0.67 0.0
ALA C:176 C:176 81.0 0.704 T -75.9 3.6 NA NA NA
ALA D:176 D:176 77.0 0.67 T -83.5 -7.1 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 ALA A:176 A:176 73.0 0.635 T -76.9 -6.4 73.0 0.635 0.0 HOH
 2.658
 N
 O
ALA B:176 B:176 78.0 0.678 T -77.8 -0.0 78.0 0.678 0.0 HOH
 3.161
 N
 O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:176 A:176 69.0 0.6 T -69.5 -19.9 69.0 0.6 0.0 HOH
 4.752
 CB
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:176 A:176 79.0 0.687 T -82.6 -12.9 79.0 0.687 0.0
ALA B:176 B:176 81.0 0.704 G -78.9 4.3 81.0 0.704 0.0
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ALA A:176 A:176 78.0 0.678 G -78.4 6.2 78.0 0.678 0.0
ALA B:176 B:176 76.0 0.661 G -76.5 -5.8 76.0 0.661 0.0
ALA C:176 C:176 71.0 0.617 T -84.8 -13.0 NA NA NA
ALA D:176 D:176 75.0 0.652 G -88.7 -5.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 ALA A:177 A:177 86.0 0.748 T -77.9 -9.5
af-p09488-f1 1 P09488 87.61 6e-142 ALA A:177 A:177 78.0 0.678 T -78.0 -6.0
af-q03013-f1 1 Q03013 83.03 1e-134 ALA A:177 A:177 79.0 0.687 T -76.2 -5.8
af-p28161-f1 1 P28161 81.19 6e-134 ALA A:177 A:177 79.0 0.687 T -78.3 -5.1