Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110260004 . C A CCDS811.1:NM_000851.3:c.613Cga>Aga_NP_000842.2:p.205R>R Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 PRO A:205 A:204 37.0 0.255 -68.9 -12.7 37.0 0.255 0.0 HOH
 3.466
 CB
 O
PRO B:205 B:204 28.0 0.193 -69.3 -12.2 28.0 0.193 0.0 HOH
 3.065
 CD
 O
PRO C:205 C:204 38.0 0.262 -68.9 -12.3 NA NA NA
PRO D:205 D:204 29.0 0.2 -70.8 -13.2 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 PRO A:205 A:204 31.0 0.214 -88.9 2.5 31.0 0.214 0.0 HOH
 3.415
 CB
 O
PRO B:205 B:204 30.0 0.207 -93.8 -4.9 NA NA NA
PRO C:205 C:204 32.0 0.221 -90.4 -3.5 32.0 0.221 0.0 HOH
 4.571
 CB
 O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 PRO A:205 A:204 35.0 0.241 -75.7 -17.3 35.0 0.241 0.0 HOH
 5.245
 N
 O
PRO B:205 B:204 36.0 0.248 -73.7 -19.2 36.0 0.248 0.0 HOH
 4.917
 N
 O
PRO C:205 C:204 35.0 0.241 -73.3 -22.1 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 PRO A:205 A:204 38.0 0.262 -82.8 -7.8 38.0 0.262 0.0 HOH
 5.036
 CB
 O
PRO B:205 B:204 39.0 0.269 -81.3 -10.7 39.0 0.269 0.0 HOH
 4.476
 N
 O
PRO C:205 C:204 38.0 0.262 -82.0 -8.2 NA NA NA
PRO D:205 D:204 38.0 0.262 -81.1 -8.4 NA NA NA
PRO E:205 E:204 39.0 0.269 -82.1 -7.7 NA NA NA
PRO F:205 F:204 40.0 0.276 -82.2 -7.2 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 PRO A:205 A:204 44.0 0.303 -76.0 -22.7 44.0 0.303 0.0 HOH
 3.150
 CD
 O
PRO B:205 B:204 43.0 0.297 -77.1 -12.2 NA NA NA
PRO C:205 C:204 18.0 0.124 -80.8 -16.7 NA NA NA
PRO D:205 D:204 36.0 0.248 -77.8 -16.3 36.0 0.248 0.0 HOH
 4.409
 N
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 PRO A:204 A:204 41.0 0.283 -74.6 -14.7 41.0 0.283 0.0 HOH
 4.542
 N
 O
PRO B:204 B:204 41.0 0.283 -68.6 -21.6 41.0 0.283 0.0 HOH
 4.107
 N
 O
PRO C:204 C:204 43.0 0.297 -73.6 -14.5 NA NA NA
PRO D:204 D:204 43.0 0.297 -71.7 -15.8 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 PRO A:205 A:205 26.0 0.179 -80.2 -17.8 26.0 0.179 0.0 HOH
 2.589
 O
 O
PRO B:205 B:205 33.0 0.228 -75.2 -20.3 33.0 0.228 0.0 HOH
 3.241
 CD
 O
PRO C:205 C:205 49.0 0.338 -81.3 -11.7 NA NA NA
PRO D:205 D:205 22.0 0.152 -76.1 -20.9 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 PRO A:212 A:212 42.0 0.29 -75.8 -19.7 42.0 0.29 0.0 HOH
 3.360
 CB
 O
PRO B:212 B:212 39.0 0.269 -72.6 -21.2 39.0 0.269 0.0 HOH
 3.218
 CD
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 PRO A:204 A:204 53.0 0.366 -97.0 -15.3 53.0 0.366 0.0
PRO B:204 B:204 59.0 0.407 -91.6 -70.3 59.0 0.407 0.0
PRO C:204 C:204 50.0 0.345 -82.6 -33.2 NA NA NA
PRO D:204 D:204 57.0 0.393 -95.7 -61.2 NA NA NA
PRO E:204 E:204 39.0 0.269 -74.6 -94.4 NA NA NA
PRO F:204 F:204 62.0 0.428 -89.0 -36.3 NA NA NA
PRO G:204 G:204 56.0 0.386 -81.5 -29.6 NA NA NA
PRO H:204 H:204 38.0 0.262 -102.2 -34.1 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 PRO A:204 A:204 31.0 0.214 -84.9 -12.5 31.0 0.214 0.0 HOH
 2.623
 O
 O
PRO B:204 B:204 31.0 0.214 -88.9 -17.5 31.0 0.214 0.0 HOH
 2.665
 O
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 PRO A:204 A:204 33.0 0.228 -78.2 -22.8 33.0 0.228 0.0 GDS
HOH
 9.903
3.472
 O
CG
 OE3
O
PRO B:204 B:204 33.0 0.228 -79.4 -18.8 33.0 0.228 0.0 HOH
 4.163
 CD
 O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 PRO A:204 A:204 28.0 0.193 -83.6 -7.1 28.0 0.193 0.0 HOH
 3.082
 CB
 O
PRO B:204 B:204 29.0 0.2 -84.2 -8.9 29.0 0.2 0.0 HOH
 4.347
 CB
 O
PRO C:204 C:204 27.0 0.186 -83.4 -9.9 NA NA NA
PRO D:204 D:204 29.0 0.2 -84.2 -9.1 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 PRO A:204 A:204 49.0 0.338 -86.3 -8.0 49.0 0.338 0.0 HOH
 4.448
 CB
 O
PRO B:204 B:204 49.0 0.338 -84.6 -12.0 49.0 0.338 0.0 HOH
 4.347
 CB
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 PRO A:204 A:204 54.0 0.372 -81.4 -23.6 54.0 0.372 0.0
PRO C:204 C:204 54.0 0.372 -80.3 -20.5 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 PRO A:204 A:204 41.0 0.283 -77.3 -24.5 41.0 0.283 0.0 HOH
 4.572
 CB
 O
PRO B:204 B:204 35.0 0.241 -85.9 -10.2 35.0 0.241 0.0 HOH
 3.406
 CB
 O
PRO C:204 C:204 36.0 0.248 -80.0 -19.6 NA NA NA
PRO D:204 D:204 61.0 0.421 -85.6 -22.5 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 PRO A:204 A:204 48.0 0.331 -82.1 -16.9 48.0 0.331 0.0 HOH
 3.660
 CB
 O
PRO B:204 B:204 44.0 0.303 -83.9 -16.2 44.0 0.303 0.0 HOH
 3.966
 CB
 O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 PRO A:204 A:204 26.0 0.179 S -89.0 -93.8 26.0 0.179 0.0 HOH
 3.339
 CG
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 PRO A:204 A:204 85.0 0.586 S -74.8 -34.6 85.0 0.586 0.0
PRO B:204 B:204 17.0 0.117 -78.4 146.4 17.0 0.117 0.0
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 PRO A:204 A:204 122.0 0.841 S -61.4 -58.2 122.0 0.841 0.0
PRO B:204 B:204 24.0 0.166 -74.0 -63.0 24.0 0.166 0.0
PRO C:204 C:204 89.0 0.614 -74.0 -18.7 NA NA NA
PRO D:204 D:204 107.0 0.738 -49.9 90.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 ARG A:205 A:205 164.0 0.729 -74.6 -51.2
af-p09488-f1 1 P09488 87.61 6e-142 PRO A:205 A:205 45.0 0.31 -79.3 -21.0
af-q03013-f1 1 Q03013 83.03 1e-134 PRO A:205 A:205 45.0 0.31 -79.7 -20.2
af-p28161-f1 1 P28161 81.19 6e-134 PRO A:205 A:205 36.0 0.248 -78.4 -21.9