Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 110260040 . A C CCDS811.1:NM_000851.3:c.649Agc>Cgc_NP_000842.2:p.217S>R Homo sapiens glutathione S-transferase mu 5 (GSTM5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1xw6 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ASN A:217 A:216 59.0 0.369 -71.4 -9.7 59.0 0.369 0.0 HOH
 2.937
 OD1
 O
ASN B:217 B:216 59.0 0.369 -70.7 -11.4 59.0 0.369 0.0 HOH
 2.684
 O
 O
ASN C:217 C:216 58.0 0.362 -70.6 -12.7 NA NA NA
ASN D:217 D:216 57.0 0.356 -69.4 -12.4 NA NA NA
1xwk 1 P09488 87.61 1e-141 X-RAY
 2004-12-21 ASN A:217 A:216 57.0 0.356 -76.8 -10.5 57.0 0.356 0.0 HOH
 2.652
 O
 O
ASN B:217 B:216 61.0 0.381 -76.1 -12.2 NA NA NA
ASN C:217 C:216 58.0 0.362 -74.0 -12.8 58.0 0.362 0.0 HOH
 2.969
 ND2
 O
1yj6 1 P09488 87.61 1e-141 X-RAY
 2005-02-01 ASN A:217 A:216 44.0 0.275 -77.5 -16.5 44.0 0.275 0.0 HOH
 3.030
 O
 O
ASN B:217 B:216 54.0 0.338 -72.9 -22.3 54.0 0.338 0.0 HOH
 9.573
 CA
 O
ASN C:217 C:216 42.0 0.263 -74.8 -19.3 NA NA NA
2f3m 1 P09488 87.61 1e-141 X-RAY
 2006-04-25 ASN A:217 A:216 55.0 0.344 -85.3 -11.1 55.0 0.344 0.0 GTD
 9.202
 CA
 O21
ASN B:217 B:216 55.0 0.344 -87.8 -9.6 55.0 0.344 0.0 GTD
HOH
 9.065
6.894
 CA
O
 O21
O
ASN C:217 C:216 53.0 0.331 -86.1 -10.7 NA NA NA
ASN D:217 D:216 54.0 0.338 -85.4 -11.6 NA NA NA
ASN E:217 E:216 54.0 0.338 -85.3 -11.1 NA NA NA
ASN F:217 F:216 47.0 0.294 -86.4 -10.3 NA NA NA
7beu 1 P09488 87.61 1e-141 X-RAY
 2022-01-12 ASN A:217 A:216 43.0 0.269 -82.0 -9.3 43.0 0.269 0.0 HOH
 2.803
 O
 O
ASN B:217 B:216 54.0 0.338 -77.1 -16.7 NA NA NA
ASN C:217 C:216 56.0 0.35 -86.1 -13.3 NA NA NA
ASN D:217 D:216 36.0 0.225 -80.6 -16.1 36.0 0.225 0.0 HOH
 2.839
 ND2
 O
1gtu 1 P09488 87.56 1e-140 X-RAY
 1999-02-02 ASN A:216 A:216 56.0 0.35 -87.6 173.9 56.0 0.35 0.0
ASN B:216 B:216 62.0 0.388 -92.0 178.0 62.0 0.388 0.0 HOH
 9.862
 CB
 O
ASN C:216 C:216 59.0 0.369 -93.3 173.4 NA NA NA
ASN D:216 D:216 60.0 0.375 -81.9 170.8 NA NA NA
2c4j 1 P28161 81.19 8e-134 X-RAY
 2005-10-26 ASN A:217 A:217 45.0 0.281 -82.1 -11.0 45.0 0.281 0.0 HOH
 2.678
 O
 O
ASN B:217 B:217 57.0 0.356 -81.2 -15.4 57.0 0.356 0.0 GSO
HOH
 9.982
2.664
 CA
OD1
 CG2
O
ASN C:217 C:217 43.0 0.269 -90.6 2.9 NA NA NA
ASN D:217 D:217 43.0 0.269 -89.5 -6.1 NA NA NA
2dc5 1 30354091 81.57 1e-133 X-RAY
 2006-06-28 SER A:224 A:224 30.0 0.261 -97.3 -24.8 30.0 0.261 0.0 HOH
 2.636
 OG
 O
SER B:224 B:224 49.0 0.426 -72.3 -8.0 49.0 0.426 0.0 HOH
 2.515
 OG
 O
4gtu 1 Q03013 83.33 2e-133 X-RAY
 2000-01-14 ASN A:216 A:216 57.0 0.356 -82.4 152.4 57.0 0.356 0.0
ASN B:216 B:216 59.0 0.369 B -79.1 149.2 59.0 0.369 0.0
ASN C:216 C:216 67.0 0.419 -62.6 163.2 NA NA NA
ASN D:216 D:216 56.0 0.35 B -117.4 139.7 NA NA NA
ASN E:216 E:216 58.0 0.362 B -80.2 145.2 NA NA NA
ASN F:216 F:216 70.0 0.438 -90.0 161.4 NA NA NA
ASN G:216 G:216 52.0 0.325 -159.7 146.4 NA NA NA
ASN H:216 H:216 56.0 0.35 -82.0 173.5 NA NA NA
1xw5 1 P28161 81.11 1e-132 X-RAY
 2004-11-30 ASN A:216 A:216 41.0 0.256 -78.4 -18.8 41.0 0.256 0.0 HOH
 2.626
 O
 O
ASN B:216 B:216 45.0 0.281 -80.4 -12.8 45.0 0.281 0.0 HOH
 2.751
 O
 O
1ykc 1 P28161 81.11 1e-132 X-RAY
 2005-01-25 ASN A:216 A:216 51.0 0.319 -70.5 -6.1 51.0 0.319 0.0 GDS
HOH
 9.202
2.779
 N
ND2
 O2
O
ASN B:216 B:216 48.0 0.3 -77.2 -6.7 48.0 0.3 0.0 GDS
HOH
 9.272
2.692
 CA
O
 O2
O
2ab6 1 P28161 81.11 1e-132 X-RAY
 2005-08-02 ASN A:216 A:216 47.0 0.294 -80.0 -26.6 47.0 0.294 0.0 HOH
 3.950
 N
 O
ASN B:216 B:216 51.0 0.319 -81.6 -28.7 51.0 0.319 0.0 HOH
 2.985
 O
 O
ASN C:216 C:216 47.0 0.294 -82.8 -27.3 NA NA NA
ASN D:216 D:216 48.0 0.3 -81.9 -29.2 NA NA NA
2gtu 1 P28161 81.11 1e-132 X-RAY
 1999-03-02 ASN A:216 A:216 61.0 0.381 B -88.8 136.2 61.0 0.381 0.0 HOH
 9.566
 N
 O
ASN B:216 B:216 61.0 0.381 B -94.3 146.3 61.0 0.381 0.0 HOH
 6.735
 C
 O
3gtu 1 P28161 81.11 1e-132 X-RAY
 1999-07-29 ASN A:216 A:216 53.0 0.331 -80.3 -153.8 53.0 0.331 0.0 HOH
 8.975
 CA
 O
ASN C:216 C:216 52.0 0.325 -74.5 -155.7 NA NA NA
3gur 1 P28161 81.11 1e-132 X-RAY
 2009-10-27 ASN A:216 A:216 50.0 0.312 -119.9 -15.7 50.0 0.312 0.0 BYG
HOH
 9.941
2.421
 O
O
 S1
O
ASN B:216 B:216 106.0 0.662 -133.0 360.0 106.0 0.662 0.0 HOH
 2.837
 O
 O
ASN C:216 C:216 52.0 0.325 -92.4 -9.3 NA NA NA
ASN D:216 D:216 48.0 0.3 -84.1 -2.1 NA NA NA
5hwl 1 P28161 81.11 1e-132 X-RAY
 2017-11-08 ASN A:216 A:216 76.0 0.475 -76.0 -16.7 76.0 0.475 0.0 NNE
HOH
 9.495
2.529
 CA
O
 CBN
O
ASN B:216 B:216 46.0 0.287 -80.6 -8.6 46.0 0.287 0.0 NNE
HOH
 9.592
2.923
 CA
O
 CAN
O
1hna 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ASN A:216 A:216 66.0 0.412 -70.8 26.6 66.0 0.412 0.0 HOH
 9.096
 O
 O
1hnb 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ASN A:216 A:216 23.0 0.144 -56.2 -42.4 23.0 0.144 0.0
ASN B:216 B:216 24.0 0.15 -60.8 -30.0 24.0 0.15 0.0
1hnc 1 P28161 80.65 2e-131 X-RAY
 1994-01-31 ASN A:216 A:216 42.0 0.263 -141.4 154.3 42.0 0.263 0.0
ASN B:216 B:216 102.0 0.637 -61.1 136.6 102.0 0.637 0.0
ASN C:216 C:216 112.0 0.7 -109.9 -13.8 NA NA NA
ASN D:216 D:216 132.0 0.825 -72.4 114.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46439-f1 1 P46439 100.0 5e-163 SER A:217 A:217 22.0 0.191 -107.7 -0.8
af-p09488-f1 1 P09488 87.61 6e-142 ASN A:217 A:217 47.0 0.294 -82.9 0.9
af-q03013-f1 1 Q03013 83.03 1e-134 ASN A:217 A:217 47.0 0.294 -84.3 3.9
af-p28161-f1 1 P28161 81.19 6e-134 ASN A:217 A:217 49.0 0.306 -83.6 -0.1