Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 153598867 . C A CCDS30874.1:NM_001024210.1:c.82Ggc>Tgc_NP_001019381.1:p.28G>C Homo sapiens S100 calcium binding protein A13 (S100A13), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2h2k 1 Q99584 100.0 4e-67 X-RAY
 2007-05-22 GLY A:36 A:28 64.0 0.853 S 50.0 -142.7 64.0 0.853 0.0 CA
HOH
 4.160
3.536
 C
CA
 CA
O
GLY B:36 B:28 72.0 0.96 S 49.2 -137.7 72.0 0.96 0.0 CA
HOH
 4.257
3.953
 C
C
 CA
O
2egd 1 Q99584 100.0 9e-67 X-RAY
 2008-03-11 GLY A:28 A:28 79.0 1.0 S 55.0 -142.2 79.0 1.0 0.0 CA
HOH
 4.174
4.001
 C
CA
 CA
O
GLY B:28 B:28 70.0 0.933 S 63.7 -149.0 70.0 0.933 0.0 CA
HOH
 4.218
4.053
 C
C
 CA
O
2k8m 2 Q99584 100.0 9e-67 NMR
 2009-03-17 GLY B:28 B:28 31.0 0.413 S 170.9 162.7 31.0 0.413 0.0
GLY C:28 C:28 37.0 0.493 S -167.8 134.7 37.0 0.493 0.0
2ki4 2 Q99584 100.0 9e-67 NMR
 2010-03-09 GLY B:28 B:28 61.0 0.813 S -48.4 124.3 61.0 0.813 0.0
2ki4 3 Q99584 100.0 9e-67 NMR
 2010-03-09 GLY C:28 C:28 41.0 0.547 S -93.9 160.4 41.0 0.547 0.0
2ki6 3 Q99584 100.0 9e-67 NMR
 2010-03-09 GLY C:28 C:28 61.0 0.813 S -48.4 124.3 61.0 0.813 0.0
2ki6 4 Q99584 100.0 9e-67 NMR
 2010-03-09 GLY D:28 D:28 41.0 0.547 S -93.9 160.4 41.0 0.547 0.0
2kot 1 Q99584 100.0 9e-67 NMR
 2010-03-09 GLY A:28 A:28 38.0 0.507 S -52.3 147.9 38.0 0.507 0.0
GLY B:28 B:28 46.0 0.613 S -58.7 142.6 46.0 0.613 0.0 ANW
 9.335
 C
 HNAA
2l5x 2 Q99584 100.0 9e-67 NMR
 2011-01-26 GLY B:28 B:28 60.0 0.8 S -54.6 142.2 1.0 0.013 0.787 A:P01583:0.787
GLY C:28 C:28 55.0 0.733 S -54.4 142.9 1.0 0.013 0.72 D:P01583:0.72
2le9 2 Q99584 100.0 7e-66 NMR
 2012-06-27 GLY B:27 B:28 49.0 0.653 S -67.1 152.2 22.0 0.293 0.36 A:Q15109:0.36
GLY C:27 C:28 49.0 0.653 S -78.5 153.4 24.0 0.32 0.333 D:Q15109:0.333

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q99584-f1 1 Q99584 100.0 4e-67 GLY A:28 A:28 60.0 0.8 T 92.1 -1.2