Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 158151347 | . | C | A | CCDS1173.1:NM_001766.3:c.164aCg>aAg_NP_001757.1:p.55T>K | Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1zt4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2005-07-19 | THR | A:37 | A:37 | 0.0 | 0.0 | E | -96.6 | -26.1 | 0.0 | 0.0 | 0.0 |
AGH |
6.118 |
OG1 |
CAS |
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| THR | C:37 | C:37 | 0.0 | 0.0 | E | -96.6 | -26.6 | NA | NA | NA | |||||||||||||
| 6v7y | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | THR | A:34 | A:34 | 0.0 | 0.0 | E | -99.2 | -24.3 | 0.0 | 0.0 | 0.0 |
AGH HOH |
6.125 4.959 |
OG1 N |
CAQ O |
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| 6v7z | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | THR | A:34 | A:37 | 0.0 | 0.0 | E | -96.3 | -27.8 | 0.0 | 0.0 | 0.0 |
AGH BGC |
5.589 7.644 |
OG1 N |
CAR O1 |
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| THR | C:34 | C:37 | 0.0 | 0.0 | E | -98.1 | -28.3 | NA | NA | NA | |||||||||||||
| 6v80 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | THR | A:34 | A:37 | 7.0 | 0.05 | E | -114.3 | -40.2 | 7.0 | 0.05 | 0.0 |
AGH |
5.346 |
OG1 |
CAR |
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| THR | F:34 | F:37 | 8.0 | 0.057 | E | -95.9 | -33.3 | NA | NA | NA | |||||||||||||
| 4wwk | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | THR | C:38 | C:37 | 0.0 | 0.0 | E | -97.7 | -28.6 | 0.0 | 0.0 | 0.0 |
JLS |
6.264 |
OG1 |
CAS |
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| 3huj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2009-07-28 | THR | A:38 | A:37 | 0.0 | 0.0 | E | -97.4 | -24.6 | 0.0 | 0.0 | 0.0 |
AGH HOH |
5.732 5.158 |
OG1 N |
CAR O |
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| THR | C:38 | C:37 | 0.0 | 0.0 | E | -99.9 | -23.6 | NA | NA | NA | |||||||||||||
| 3vwj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | THR | A:38 | A:37 | 3.0 | 0.021 | E | -120.0 | -20.4 | 3.0 | 0.021 | 0.0 |
DB3 |
6.166 |
OG1 |
CAT |
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| 3vwk | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | THR | A:38 | A:37 | 0.0 | 0.0 | E | -106.1 | -23.6 | 0.0 | 0.0 | 0.0 |
4GH |
6.299 |
OG1 |
CAS |
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| 4ww2 | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | THR | C:38 | C:37 | 0.0 | 0.0 | E | -94.8 | -32.8 | 0.0 | 0.0 | 0.0 |
JLS HOH |
6.298 8.476 |
OG1 O |
CAR O |
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| 4en3 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2012-10-31 | THR | A:38 | C:37 | 0.0 | 0.0 | E | -96.4 | -27.2 | 0.0 | 0.0 | 0.0 |
AGH HOH |
5.958 5.087 |
OG1 N |
CAT O |
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| 3sdx | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2011-10-05 | THR | A:32 | A:37 | 0.0 | 0.0 | E | -108.6 | -25.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.751 |
N |
O |
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| THR | F:32 | C:37 | 0.0 | 0.0 | E | -111.7 | -22.2 | NA | NA | NA | |||||||||||||
| 2po6 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2007-07-03 | THR | A:32 | A:37 | 0.0 | 0.0 | E | -105.5 | -37.8 | 0.0 | 0.0 | 0.0 |
AGH |
5.990 |
OG1 |
CAR |
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| THR | E:32 | E:37 | 0.0 | 0.0 | E | -91.8 | -38.3 | NA | NA | NA | |||||||||||||
| 4lhu | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2013-10-02 | THR | A:32 | A:37 | 0.0 | 0.0 | E | -93.4 | -39.2 | 0.0 | 0.0 | 0.0 |
JLS HOH |
7.236 7.490 |
C O |
CAR O |
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| 4wo4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2014-11-26 | THR | A:32 | A:37 | 0.0 | 0.0 | E | -99.6 | -25.7 | 0.0 | 0.0 | 0.0 |
JLS HOH |
6.851 5.100 |
OG1 N |
CAS O |
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| 3u0p | 1 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | THR | A:38 | A:37 | 0.0 | 0.0 | E | -101.0 | -18.5 | 0.0 | 0.0 | 0.0 |
HEX GOL UND HOH |
9.768 9.901 6.036 6.697 |
OG1 CG2 OG1 N |
C1 C1 C2 O |
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| THR | C:38 | C:37 | 0.0 | 0.0 | E | -98.4 | -21.0 | NA | NA | NA | |||||||||||||
| THR | E:38 | E:37 | 0.0 | 0.0 | E | -97.3 | -20.4 | NA | NA | NA | |||||||||||||
| 3tzv | 3 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | THR | C:36 | C:37 | 2.0 | 0.014 | E | -100.2 | -55.7 | 2.0 | 0.014 | 0.0 |
D12 |
6.169 |
OG1 |
C9 |
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| 4mng | 2 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | THR | B:38 | A:37 | 0.0 | 0.0 | E | -95.1 | -12.4 | 0.0 | 0.0 | 0.0 |
CIS |
6.310 |
OG1 |
C35 |
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| THR | D:38 | C:37 | 0.0 | 0.0 | E | -95.0 | -12.6 | NA | NA | NA | |||||||||||||
| 4mq7 | 1 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | THR | A:38 | A:37 | 0.0 | 0.0 | E | -100.9 | -31.9 | 0.0 | 0.0 | 0.0 |
CIS HOH |
6.020 6.000 |
OG1 N |
C37 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p15813-f1 | 1 | P15813 | 100.0 | 0.0 | THR | A:55 | A:55 | 0.0 | 0.0 | E | -98.7 | -31.6 | |