Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 162546711 . G A CCDS1240.1:NM_003115.4:c.425cGt>cAt_NP_003106.3:p.142R>H Homo sapiens UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jv1 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 ARG A:142 A:142 16.0 0.071 H -72.8 -34.7 16.0 0.071 0.0 HOH
 2.928
 NH2
 O
ARG B:142 B:142 16.0 0.071 H -72.4 -33.9 16.0 0.071 0.0 HOH
 2.952
 NE
 O
1jv3 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 ARG A:142 A:142 17.0 0.076 H -70.6 -37.2 17.0 0.076 0.0 HOH
 2.910
 NE
 O
ARG B:142 B:142 14.0 0.062 H -70.4 -33.3 14.0 0.062 0.0 HOH
 2.853
 NH2
 O
6z2f 1 Q16222 99.6 0.0 X-RAY
 2021-05-26 ARG A:146 A:142 14.0 0.062 H -62.8 -39.8 14.0 0.062 0.0 HOH
 2.969
 NE
 O
6z2f 2 Q16222 99.6 0.0 X-RAY
 2021-05-26 ARG B:146 B:142 13.0 0.058 H -64.6 -41.0 13.0 0.058 0.0 HOH
 2.890
 NE
 O
1jvd 1 Q16222 96.74 0.0 X-RAY
 2002-08-29 ARG A:142 A:142 14.0 0.062 H -69.2 -32.4 14.0 0.062 0.0 HOH
 3.009
 NH1
 O
ARG B:142 B:142 13.0 0.058 H -74.3 -30.1 13.0 0.058 0.0 HOH
 3.027
 CD
 O
1jvg 1 Q16222 96.74 0.0 X-RAY
 2002-08-30 ARG A:142 A:142 17.0 0.076 H -71.4 -34.4 17.0 0.076 0.0 HOH
 3.049
 NH1
 O
ARG B:142 B:142 13.0 0.058 H -70.7 -34.5 13.0 0.058 0.0 HOH
 3.087
 NH1
 O
1vm8 1 Q91YN5 90.23 0.0 X-RAY
 2004-10-05 ARG A:154 A:142 12.0 0.053 H -76.6 -29.2 12.0 0.053 0.0 HOH
 5.247
 NE
 O
ARG B:154 B:142 14.0 0.062 H -68.6 -46.8 14.0 0.062 0.0 HOH
 5.639
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16222-f1 1 Q16222 96.74 0.0 ARG A:142 A:142 13.0 0.058 H -62.1 -40.8