Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 162549247 . A C CCDS1240.1:NM_003115.4:c.515gAa>gCa_NP_003106.3:p.172E>A Homo sapiens UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jv1 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 GLU A:172 A:172 125.0 0.658 H -59.4 -52.6 125.0 0.658 0.0 HOH
 2.479
 OE2
 O
GLU B:172 B:172 112.0 0.589 H -61.2 -48.1 112.0 0.589 0.0 HOH
 3.528
 N
 O
1jv3 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 GLU A:172 A:172 118.0 0.621 H -51.5 -60.7 118.0 0.621 0.0 HOH
 2.729
 OE2
 O
GLU B:172 B:172 110.0 0.579 H -60.1 -53.0 110.0 0.579 0.0 HOH
 7.628
 N
 O
6z2f 1 Q16222 99.6 0.0 X-RAY
 2021-05-26 GLU A:176 A:172 135.0 0.711 H -71.9 -40.4 135.0 0.711 0.0 HOH
 2.629
 OE2
 O
6z2f 2 Q16222 99.6 0.0 X-RAY
 2021-05-26 GLU B:176 B:172 141.0 0.742 H -64.3 -44.5 115.0 0.605 0.137 A:Q16222:0.137
 HOH
 3.099
 OE1
 O
1jvd 1 Q16222 96.74 0.0 X-RAY
 2002-08-29 GLU A:172 A:172 133.0 0.7 H -57.9 -46.2 133.0 0.7 0.0 HOH
 2.567
 OE2
 O
GLU B:172 B:172 130.0 0.684 H -55.9 -64.5 130.0 0.684 0.0 HOH
 8.012
 N
 O
1jvg 1 Q16222 96.74 0.0 X-RAY
 2002-08-30 GLU A:172 A:172 140.0 0.737 H -64.4 -50.8 140.0 0.737 0.0 HOH
 7.794
 N
 O
GLU B:172 B:172 129.0 0.679 H -53.3 -51.3 129.0 0.679 0.0 HOH
 8.174
 N
 O
1vm8 1 Q91YN5 90.23 0.0 X-RAY
 2004-10-05 GLU A:184 A:172 139.0 0.732 H -64.8 -26.4 139.0 0.732 0.0 HOH
 8.450
 N
 O
GLU B:184 B:172 55.0 NA H -53.4 -34.9 55.0 NA NA HOH
 3.246
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16222-f1 1 Q16222 96.74 0.0 GLU A:172 A:172 106.0 0.558 H -63.2 -54.9