Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 162560252 | . | G | A | CCDS1240.1:NM_003115.4:c.1309Ggg>Agg_NP_003106.3:p.437G>R | Homo sapiens UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1jv1 | 1 | Q16222 | 100.0 | 0.0 |
X-RAY |
2002-08-28 | GLY | A:437 | A:437 | 26.0 | 0.347 | T | 99.6 | 0.5 | 26.0 | 0.347 | 0.0 |
HOH |
2.872 |
O |
O |
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GLY | B:437 | B:437 | 27.0 | 0.36 | T | 91.6 | 9.4 | 27.0 | 0.36 | 0.0 |
HOH |
3.413 |
C |
O |
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1jv3 | 1 | Q16222 | 100.0 | 0.0 |
X-RAY |
2002-08-28 | GLY | A:437 | A:437 | 27.0 | 0.36 | T | 102.0 | -2.5 | 27.0 | 0.36 | 0.0 |
HOH |
3.275 |
O |
O |
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GLY | B:437 | B:437 | 29.0 | 0.387 | T | 91.1 | 7.9 | 29.0 | 0.387 | 0.0 |
HOH |
3.458 |
C |
O |
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6z2f | 1 | Q16222 | 99.6 | 0.0 |
X-RAY |
2021-05-26 | GLY | A:441 | A:437 | 29.0 | 0.387 | T | 95.8 | 10.0 | 29.0 | 0.387 | 0.0 |
HOH |
3.537 |
C |
O |
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6z2f | 2 | Q16222 | 99.6 | 0.0 |
X-RAY |
2021-05-26 | GLY | B:441 | B:437 | 31.0 | 0.413 | T | 94.6 | 9.5 | 31.0 | 0.413 | 0.0 |
HOH |
3.476 |
C |
O |
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1jvd | 1 | Q16222 | 96.74 | 0.0 |
X-RAY |
2002-08-29 | GLY | A:437 | A:437 | 27.0 | 0.36 | T | 96.3 | 10.8 | 27.0 | 0.36 | 0.0 |
HOH |
3.418 |
O |
O |
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GLY | B:437 | B:437 | 29.0 | 0.387 | T | 86.3 | 0.1 | 29.0 | 0.387 | 0.0 |
HOH |
3.500 |
C |
O |
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1jvg | 1 | Q16222 | 96.74 | 0.0 |
X-RAY |
2002-08-30 | GLY | A:437 | A:437 | 28.0 | 0.373 | T | 95.3 | 6.0 | 28.0 | 0.373 | 0.0 |
HOH |
3.497 |
C |
O |
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GLY | B:437 | B:437 | 30.0 | 0.4 | T | 80.1 | 12.6 | 30.0 | 0.4 | 0.0 |
HOH |
3.498 |
C |
O |
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1vm8 | 1 | Q91YN5 | 90.23 | 0.0 |
X-RAY |
2004-10-05 | GLY | A:449 | A:437 | 28.0 | 0.373 | T | 82.7 | 7.3 | 28.0 | 0.373 | 0.0 |
HOH |
6.921 |
O |
O |
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GLY | B:449 | B:437 | 29.0 | 0.387 | T | 101.2 | -13.0 | 29.0 | 0.387 | 0.0 |
CL HOH |
9.411 3.226 |
O C |
CL O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q16222-f1 | 1 | Q16222 | 96.74 | 0.0 | GLY | A:437 | A:437 | 28.0 | 0.373 | T | 86.8 | 11.9 |