Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 162567592 . G A CCDS1240.1:NM_003115.4:c.1369Gcc>Acc_NP_003106.3:p.457A>T Homo sapiens UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jv1 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 ALA A:457 A:457 107.0 0.93 T -55.0 -30.8 39.0 0.339 0.591 B:Q16222:0.591
 HOH
 2.698
 O
 O
ALA B:457 B:457 108.0 0.939 T -50.5 -34.4 52.0 0.452 0.487 A:Q16222:0.487
 HOH
 2.717
 O
 O
1jv3 1 Q16222 100.0 0.0 X-RAY
 2002-08-28 ALA A:457 A:457 106.0 0.922 T -53.5 -40.8 38.0 0.33 0.592 B:Q16222:0.591
 HOH
 2.615
 O
 O
ALA B:457 B:457 107.0 0.93 T -52.2 -38.0 59.0 0.513 0.417 A:Q16222:0.417
 HOH
 2.861
 N
 O
6z2f 1 Q16222 99.6 0.0 X-RAY
 2021-05-26 ALA A:461 A:457 107.0 0.93 T -67.4 -20.3 107.0 0.93 0.0 HOH
 6.064
 C
 O
6z2f 2 Q16222 99.6 0.0 X-RAY
 2021-05-26 ALA B:461 B:457 106.0 0.922 T -60.6 -22.1 106.0 0.922 0.0 HOH
 7.209
 N
 O
1jvd 1 Q16222 96.74 0.0 X-RAY
 2002-08-29 ALA A:474 NA:NA DO NA DO DO DO NA NA NA
ALA B:474 NA:NA DO NA DO DO DO NA NA NA
1jvg 1 Q16222 96.74 0.0 X-RAY
 2002-08-30 ALA A:474 NA:NA DO NA DO DO DO NA NA NA
ALA B:474 NA:NA DO NA DO DO DO NA NA NA
1vm8 1 Q91YN5 90.23 0.0 X-RAY
 2004-10-05 ALA A:486 NA:NA DO NA DO DO DO NA NA NA
ALA B:486 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q16222-f1 1 Q16222 96.74 0.0 ALA A:474 A:474 110.0 0.957 T -59.4 -12.7