Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 162569070 | . | A | C | CCDS1240.1:NM_003115.4:c.1435Agt>Cgt_NP_003106.3:p.479S>R | Homo sapiens UDP-N-acetylglucosamine pyrophosphorylase 1 (UAP1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1jv1 | 1 | Q16222 | 100.0 | 0.0 |
X-RAY |
2002-08-28 | SER | A:479 | A:479 | 110.0 | 0.957 | H | -65.9 | -27.8 | 110.0 | 0.957 | 0.0 |
HOH |
3.340 |
N |
O |
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SER | B:479 | B:479 | 93.0 | 0.809 | H | -70.6 | -13.8 | 93.0 | 0.809 | 0.0 |
HOH |
3.180 |
O |
O |
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1jv3 | 1 | Q16222 | 100.0 | 0.0 |
X-RAY |
2002-08-28 | SER | A:479 | A:479 | 108.0 | 0.939 | H | -69.9 | -24.1 | 108.0 | 0.939 | 0.0 |
HOH |
3.277 |
N |
O |
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SER | B:479 | B:479 | 96.0 | 0.835 | H | -70.9 | -21.7 | 96.0 | 0.835 | 0.0 |
HOH |
3.215 |
O |
O |
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6z2f | 1 | Q16222 | 99.6 | 0.0 |
X-RAY |
2021-05-26 | SER | A:483 | A:479 | 81.0 | 0.704 | H | -64.7 | -30.2 | 81.0 | 0.704 | 0.0 |
HOH |
2.792 |
OG |
O |
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6z2f | 2 | Q16222 | 99.6 | 0.0 |
X-RAY |
2021-05-26 | SER | B:483 | B:479 | 108.0 | 0.939 | H | -63.9 | -30.7 | 108.0 | 0.939 | 0.0 |
HOH |
2.939 |
N |
O |
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1jvd | 1 | Q16222 | 96.74 | 0.0 |
X-RAY |
2002-08-29 | SER | A:496 | A:496 | 112.0 | 0.974 | H | -67.5 | -21.4 | 112.0 | 0.974 | 0.0 |
HOH |
3.653 |
N |
O |
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SER | B:496 | B:496 | 116.0 | 1.0 | H | -66.8 | -49.2 | 116.0 | 1.0 | 0.0 |
HOH |
6.663 |
N |
O |
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1jvg | 1 | Q16222 | 96.74 | 0.0 |
X-RAY |
2002-08-30 | SER | A:496 | A:496 | 113.0 | 0.983 | H | -68.1 | -10.4 | 113.0 | 0.983 | 0.0 |
HOH |
6.041 |
OG |
O |
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SER | B:496 | B:496 | 97.0 | 0.843 | H | -72.2 | -24.2 | 97.0 | 0.843 | 0.0 |
HOH |
6.510 |
N |
O |
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1vm8 | 1 | Q91YN5 | 90.23 | 0.0 |
X-RAY |
2004-10-05 | GLY | A:508 | A:496 | 76.0 | 1.0 | H | -46.6 | -44.4 | 76.0 | 1.0 | 0.0 | ||||||
GLY | B:508 | B:496 | 67.0 | 0.893 | H | -64.5 | -37.1 | 67.0 | 0.893 | 0.0 |
HOH |
3.516 |
CA |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q16222-f1 | 1 | Q16222 | 96.74 | 0.0 | SER | A:496 | A:496 | 93.0 | 0.809 | H | -64.3 | -25.7 |