Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 16477423 | . | G | A | CCDS169.1:NM_004431.3:c.121Ctc>Ttc_NP_004422.2:p.41L>F | Homo sapiens EPH receptor A2 (EPHA2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3fl7 | 1 | Q8N3Z2 | 99.42 | 0.0 |
X-RAY |
2009-01-27 | LEU | A:46 | A:41 | 43.0 | 0.253 | -89.0 | 133.2 | 43.0 | 0.253 | 0.0 |
CL HOH |
9.103 7.539 |
O CD1 |
CL O |
|||
2x10 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-03-16 | LEU | A:43 | A:41 | 80.0 | 0.471 | 360.0 | 125.1 | 80.0 | 0.471 | 0.0 | |||||||
2x11 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-03-16 | LEU | A:43 | A:41 | 46.0 | 0.271 | -75.0 | -39.9 | 46.0 | 0.271 | 0.0 | |||||||
3mx0 | 1 | P29317 | 100.0 | 0.0 |
X-RAY |
2010-06-30 | LEU | A:15 | A:41 | 51.0 | 0.3 | -79.5 | -56.4 | 51.0 | 0.3 | 0.0 | |||||||
LEU | C:15 | C:41 | 54.0 | 0.318 | -84.7 | -90.0 | NA | NA | NA | ||||||||||||||
3mbw | 1 | P29317 | 99.03 | 0.0 |
X-RAY |
2010-06-09 | LEU | A:45 | A:41 | 41.0 | 0.241 | -92.7 | 119.1 | 7.0 | 0.041 | 0.2 |
A:P29317:0.2 |
HOH |
2.807 |
O |
O |
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3czu | 1 | P29317 | 98.37 | 2e-127 |
X-RAY |
2008-08-12 | LEU | A:46 | A:41 | 45.0 | 0.265 | -79.4 | -35.1 | 45.0 | 0.265 | 0.0 |
HOH |
2.814 |
N |
O |
|||
3c8x | 1 | P29317 | 98.37 | 2e-127 |
X-RAY |
2008-03-25 | LEU | A:45 | A:41 | 75.0 | 0.441 | 360.0 | -76.2 | 75.0 | 0.441 | 0.0 |
HOH |
3.422 |
CD2 |
O |
|||
3skj | 3 | P29317 | 98.37 | 2e-127 |
X-RAY |
2011-08-31 | LEU | E:45 | E:17 | 46.0 | 0.271 | -103.7 | 101.2 | 46.0 | 0.271 | 0.0 |
HOH |
5.086 |
CD2 |
O |
|||
LEU | F:45 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7czf | 1 | P29317 | 98.36 | 4e-127 |
X-RAY |
2020-10-21 | LEU | A:14 | A:41 | 24.0 | 0.141 | -83.1 | 113.0 | 24.0 | 0.141 | 0.0 | |||||||
LEU | D:14 | D:41 | 30.0 | 0.176 | -79.0 | 97.0 | NA | NA | NA | ||||||||||||||
7b7n | 1 | P29317 | 99.45 | 7e-127 |
X-RAY |
2020-12-30 | LEU | A:19 | E:41 | 32.0 | 0.188 | -121.6 | 108.4 | 32.0 | 0.188 | 0.0 |
CL CL NA NA HOH |
4.120 8.754 9.762 7.212 4.289 |
C O CD1 O O |
CL CL NA NA O |
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6rw2 | 1 | P29317 | 96.7 | 6e-124 |
X-RAY |
2020-04-08 | LEU | A:33 | A:41 | 52.0 | 0.306 | S | -77.2 | -16.5 | 52.0 | 0.306 | 0.0 |
HOH |
5.338 |
O |
O |
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7cze | 3 | P29317 | 100.0 | 1e-123 |
X-RAY |
2020-10-21 | LEU | I:16 | I:41 | 130.0 | 0.765 | S | 40.7 | 57.6 | 114.0 | 0.671 | 0.094 |
B:P03212:0.094 |
NAG |
8.106 |
CD2 |
O6 |
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LEU | J:16 | J:41 | 126.0 | 0.741 | S | 42.7 | 59.4 | NA | NA | NA | |||||||||||||
LEU | K:16 | K:41 | 125.0 | 0.735 | S | 40.0 | 57.8 | NA | NA | NA | |||||||||||||
LEU | L:16 | L:41 | 126.0 | 0.741 | S | 42.8 | 59.5 | NA | NA | NA | |||||||||||||
3hei | 1 | P29317 | 100.0 | 7e-123 |
X-RAY |
2009-06-30 | LEU | A:14 | A:14 | 40.0 | 0.235 | -109.8 | 125.5 | 40.0 | 0.235 | 0.0 |
HOH |
2.821 |
O |
O |
|||
LEU | C:14 | C:14 | 39.0 | 0.229 | -104.7 | 120.0 | NA | NA | NA | ||||||||||||||
LEU | E:14 | E:14 | 42.0 | 0.247 | -87.5 | 83.9 | NA | NA | NA | ||||||||||||||
LEU | G:14 | G:14 | 47.0 | 0.276 | -96.5 | 116.7 | NA | NA | NA | ||||||||||||||
LEU | I:14 | I:14 | 47.0 | 0.276 | -81.8 | 129.6 | NA | NA | NA | ||||||||||||||
LEU | K:14 | K:14 | 34.0 | 0.2 | -101.9 | 123.2 | NA | NA | NA | ||||||||||||||
LEU | M:14 | M:14 | 35.0 | 0.206 | -100.3 | 122.6 | NA | NA | NA | ||||||||||||||
LEU | O:14 | O:14 | 47.0 | 0.276 | -92.9 | 133.3 | NA | NA | NA | ||||||||||||||
3hpn | 1 | P29317 | 100.0 | 7e-123 |
X-RAY |
2009-06-30 | LEU | A:14 | A:14 | 105.0 | 0.618 | S | -88.6 | 150.7 | 105.0 | 0.618 | 0.0 |
HOH |
3.011 |
CD1 |
O |
||
LEU | B:14 | B:14 | 107.0 | 0.629 | S | -86.9 | 145.7 | NA | NA | NA | |||||||||||||
LEU | C:14 | C:14 | 106.0 | 0.624 | S | -88.5 | 146.0 | NA | NA | NA | |||||||||||||
LEU | D:14 | D:14 | 103.0 | 0.606 | S | -85.6 | 145.3 | NA | NA | NA | |||||||||||||
LEU | E:14 | E:14 | 106.0 | 0.624 | S | -88.3 | 144.7 | NA | NA | NA | |||||||||||||
LEU | F:14 | F:14 | 108.0 | 0.635 | S | -86.7 | 146.9 | NA | NA | NA | |||||||||||||
6b9l | 1 | P29317 | 100.0 | 9e-123 |
X-RAY |
2018-10-17 | LEU | A:36 | A:41 | 33.0 | 0.194 | S | -74.6 | -19.5 | 10.0 | 0.059 | 0.135 |
B:P29317:0.135 |
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LEU | B:36 | B:41 | 41.0 | 0.241 | -76.7 | -37.8 | 12.0 | 0.071 | 0.17 |
A:P29317:0.171 |
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LEU | C:36 | C:41 | 31.0 | 0.182 | -118.7 | -16.0 | 11.0 | 0.065 | 0.117 |
D:P29317:0.118 |
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LEU | D:36 | D:41 | 34.0 | 0.2 | -67.4 | -25.7 | 8.0 | 0.047 | 0.153 |
C:P29317:0.153 |
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6njz | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | LEU | A:21 | A:41 | 47.0 | 0.276 | S | -76.1 | -8.4 | 47.0 | 0.276 | 0.0 |
BTN HOH |
9.578 2.983 |
C HD21 |
H91 O |
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LEU | B:21 | B:41 | 44.0 | 0.259 | -83.5 | 128.7 | NA | NA | NA | ||||||||||||||
6nk0 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | LEU | A:21 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LEU | B:21 | B:41 | 21.0 | 0.124 | -121.0 | -63.5 | NA | NA | NA | ||||||||||||||
6nk1 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | LEU | A:21 | A:41 | 49.0 | 0.288 | S | -86.3 | -17.8 | 49.0 | 0.288 | 0.0 |
HOH |
2.425 |
H |
O |
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LEU | B:21 | B:41 | 38.0 | 0.224 | -96.8 | 123.2 | NA | NA | NA | ||||||||||||||
6nk2 | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | LEU | A:21 | A:41 | 47.0 | 0.276 | -77.5 | -25.7 | 47.0 | 0.276 | 0.0 |
HOH |
2.272 |
H |
O |
|||
LEU | B:21 | B:41 | 38.0 | 0.224 | -87.4 | 121.0 | NA | NA | NA | ||||||||||||||
6nkp | 1 | P29317 | 98.32 | 3e-122 |
X-RAY |
2019-05-01 | LEU | A:21 | A:41 | 40.0 | 0.235 | -79.8 | 128.5 | 40.0 | 0.235 | 0.0 |
BTN HOH |
8.553 2.655 |
C H |
H102 O |
|||
LEU | B:21 | B:41 | 51.0 | 0.3 | -74.5 | 130.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p29317-f1 | 1 | P29317 | 100.0 | 0.0 | LEU | A:41 | A:41 | 37.0 | 0.218 | -87.3 | 86.5 |