Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 192992987 . C A CCDS1378.1:NM_015984.3:c.719aGa>aTa_NP_057068.1:p.240R>I Homo sapiens ubiquitin C-terminal hydrolase L5 (UCHL5), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4uel 1 Q9Y5K5 99.7 0.0 X-RAY
 2015-03-04 ARG A:243 A:240 166.0 0.738 H -61.6 -40.4 166.0 0.738 0.0 HOH
 3.585
 CD
 O
4uem 1 Q9Y5K5 99.7 0.0 X-RAY
 2015-03-04 ARG A:243 A:240 170.0 0.756 H -61.8 -37.8 170.0 0.756 0.0
4uf5 1 Q9Y5K5 99.7 0.0 X-RAY
 2015-03-04 ARG A:243 A:240 183.0 0.813 H -72.1 -20.2 183.0 0.813 0.0
4uf6 1 Q9Y5K5 99.7 0.0 X-RAY
 2015-03-04 ARG A:243 A:240 159.0 0.707 H -58.2 -40.8 159.0 0.707 0.0
ARG D:243 D:240 159.0 0.707 H -57.3 -41.5 NA NA NA
ARG G:243 G:240 167.0 0.742 H -57.4 -41.3 NA NA NA
ARG J:243 J:240 160.0 0.711 H -57.6 -40.8 NA NA NA
3ihr 1 Q9Y5K5 99.7 0.0 X-RAY
 2009-08-11 ARG A:240 A:240 163.0 0.724 H -59.2 -39.3 163.0 0.724 0.0
4wlq 1 Q9WUP7 96.66 0.0 X-RAY
 2015-03-04 ARG A:240 A:240 158.0 0.702 H -59.7 -40.0 158.0 0.702 0.0
4wlr 1 Q9WUP7 96.66 0.0 X-RAY
 2015-03-04 ARG A:240 A:240 168.0 0.747 H -62.0 -45.0 168.0 0.747 0.0 HOH
 3.473
 NH2
 O
4wlp 1 Q9Y5K5 99.69 0.0 X-RAY
 2015-03-04 ARG A:236 A:240 221.0 0.982 H -63.4 -55.1 221.0 0.982 0.0
3ris 1 Q9Y5K5 100.0 0.0 X-RAY
 2011-11-09 ARG A:245 NA:NA DO NA DO DO DO NA NA NA
ARG B:245 NA:NA DO NA DO DO DO NA NA NA
ARG C:245 NA:NA DO NA DO DO DO NA NA NA
ARG D:245 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y5k5-f1 1 Q9Y5K5 100.0 0.0 ARG A:240 A:240 126.0 0.56 H -64.9 -44.6