Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 192992987 | . | C | A | CCDS1378.1:NM_015984.3:c.719aGa>aTa_NP_057068.1:p.240R>I | Homo sapiens ubiquitin C-terminal hydrolase L5 (UCHL5), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4uel | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:243 | A:240 | 166.0 | 0.738 | H | -61.6 | -40.4 | 166.0 | 0.738 | 0.0 |
HOH |
3.585 |
CD |
O |
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4uem | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:243 | A:240 | 170.0 | 0.756 | H | -61.8 | -37.8 | 170.0 | 0.756 | 0.0 | ||||||
4uf5 | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:243 | A:240 | 183.0 | 0.813 | H | -72.1 | -20.2 | 183.0 | 0.813 | 0.0 | ||||||
4uf6 | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:243 | A:240 | 159.0 | 0.707 | H | -58.2 | -40.8 | 159.0 | 0.707 | 0.0 | ||||||
ARG | D:243 | D:240 | 159.0 | 0.707 | H | -57.3 | -41.5 | NA | NA | NA | |||||||||||||
ARG | G:243 | G:240 | 167.0 | 0.742 | H | -57.4 | -41.3 | NA | NA | NA | |||||||||||||
ARG | J:243 | J:240 | 160.0 | 0.711 | H | -57.6 | -40.8 | NA | NA | NA | |||||||||||||
3ihr | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2009-08-11 | ARG | A:240 | A:240 | 163.0 | 0.724 | H | -59.2 | -39.3 | 163.0 | 0.724 | 0.0 | ||||||
4wlq | 1 | Q9WUP7 | 96.66 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:240 | A:240 | 158.0 | 0.702 | H | -59.7 | -40.0 | 158.0 | 0.702 | 0.0 | ||||||
4wlr | 1 | Q9WUP7 | 96.66 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:240 | A:240 | 168.0 | 0.747 | H | -62.0 | -45.0 | 168.0 | 0.747 | 0.0 |
HOH |
3.473 |
NH2 |
O |
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4wlp | 1 | Q9Y5K5 | 99.69 | 0.0 |
X-RAY |
2015-03-04 | ARG | A:236 | A:240 | 221.0 | 0.982 | H | -63.4 | -55.1 | 221.0 | 0.982 | 0.0 | ||||||
3ris | 1 | Q9Y5K5 | 100.0 | 0.0 |
X-RAY |
2011-11-09 | ARG | A:245 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
ARG | B:245 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
ARG | C:245 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
ARG | D:245 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9y5k5-f1 | 1 | Q9Y5K5 | 100.0 | 0.0 | ARG | A:240 | A:240 | 126.0 | 0.56 | H | -64.9 | -44.6 |