Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 192998369 | . | C | A | CCDS1378.1:NM_015984.3:c.505Gtt>Ttt_NP_057068.1:p.169V>F | Homo sapiens ubiquitin C-terminal hydrolase L5 (UCHL5), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4uel | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:172 | A:169 | 2.0 | 0.013 | E | -154.1 | 134.9 | 2.0 | 0.013 | 0.0 |
HOH |
4.026 |
CG2 |
O |
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| 4uem | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:172 | A:169 | 1.0 | 0.006 | E | -138.0 | 139.3 | 1.0 | 0.006 | 0.0 | ||||||
| 4uf5 | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:172 | A:169 | 1.0 | 0.006 | E | -139.7 | 136.7 | 1.0 | 0.006 | 0.0 | ||||||
| 4uf6 | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:172 | A:169 | 0.0 | 0.0 | E | -149.4 | 137.1 | 0.0 | 0.0 | 0.0 | ||||||
| VAL | D:172 | D:169 | 1.0 | 0.006 | E | -149.7 | 138.4 | NA | NA | NA | |||||||||||||
| VAL | G:172 | G:169 | 1.0 | 0.006 | E | -149.6 | 138.5 | NA | NA | NA | |||||||||||||
| VAL | J:172 | J:169 | 2.0 | 0.013 | E | -149.9 | 137.7 | NA | NA | NA | |||||||||||||
| 3ihr | 1 | Q9Y5K5 | 99.7 | 0.0 |
X-RAY |
2009-08-11 | VAL | A:169 | A:169 | 2.0 | 0.013 | E | -144.8 | 152.2 | 2.0 | 0.013 | 0.0 |
FMT HOH |
9.091 8.138 |
CG1 C |
O2 O |
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| 4wlq | 1 | Q9WUP7 | 96.66 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:169 | A:169 | 2.0 | 0.013 | E | -157.0 | 139.8 | 2.0 | 0.013 | 0.0 | ||||||
| 4wlr | 1 | Q9WUP7 | 96.66 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:169 | A:169 | 1.0 | 0.006 | E | -148.7 | 134.3 | 1.0 | 0.006 | 0.0 |
HOH |
4.027 |
CG2 |
O |
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| 4wlp | 1 | Q9Y5K5 | 99.69 | 0.0 |
X-RAY |
2015-03-04 | VAL | A:165 | A:169 | 3.0 | 0.019 | E | -131.4 | 142.1 | 3.0 | 0.019 | 0.0 | ||||||
| 3ris | 1 | Q9Y5K5 | 100.0 | 0.0 |
X-RAY |
2011-11-09 | VAL | A:174 | A:169 | 3.0 | 0.019 | E | -135.0 | 146.4 | 3.0 | 0.019 | 0.0 |
HOH |
3.952 |
CG1 |
O |
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| VAL | B:174 | B:169 | 2.0 | 0.013 | E | -134.6 | 144.2 | NA | NA | NA | |||||||||||||
| VAL | C:174 | C:169 | 2.0 | 0.013 | E | -132.6 | 142.5 | NA | NA | NA | |||||||||||||
| VAL | D:174 | D:169 | 1.0 | 0.006 | E | -139.4 | 143.9 | NA | NA | NA | |||||||||||||
| 3a7s | 1 | Q9Y5K5 | 99.56 | 8e-173 |
X-RAY |
2009-11-03 | VAL | A:169 | A:169 | 3.0 | 0.019 | E | -144.1 | 140.1 | 3.0 | 0.019 | 0.0 |
HOH |
8.316 |
O |
O |
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| 3rii | 1 | Q9Y5K5 | 99.56 | 1e-172 |
X-RAY |
2011-11-09 | VAL | A:174 | A:169 | 2.0 | 0.013 | E | -144.2 | 142.4 | 2.0 | 0.013 | 0.0 |
HOH |
3.856 |
CG1 |
O |
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| VAL | B:174 | B:169 | 2.0 | 0.013 | E | -144.3 | 138.7 | NA | NA | NA | |||||||||||||
| 3tb3 | 1 | Q9Y5K5 | 99.56 | 5e-172 |
X-RAY |
2012-02-22 | VAL | A:171 | A:169 | 2.0 | 0.013 | E | -144.8 | 141.6 | 2.0 | 0.013 | 0.0 |
HOH |
8.321 |
CG2 |
O |
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| VAL | B:171 | B:169 | 2.0 | 0.013 | E | -145.3 | 141.5 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9y5k5-f1 | 1 | Q9Y5K5 | 100.0 | 0.0 | VAL | A:169 | A:169 | 2.0 | 0.013 | E | -139.4 | 139.3 | |