Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 19670861 . T A CCDS41277.1:NM_004930.3:c.722aAt>aTt_NP_004921.1:p.241N>I Homo sapiens capping actin protein of muscle Z-line beta subunit (CAPZB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6f1t 5 A9XFX6 100.0 0.0 EM
 2018-01-17 ASN L:241 L:241 89.0 0.556 H -74.3 -31.2 43.0 0.269 0.287 K:A0PFK5:0.188
A:F2Z5G5:0.1
6f38 5 A9XFX6 100.0 0.0 EM
 2018-01-17 ASN L:241 L:241 62.0 NA H -71.2 -24.8 62.0 NA NA
6f3a 5 A9XFX6 100.0 0.0 EM
 2018-01-17 ASN L:241 L:241 61.0 NA H -74.1 -29.5 61.0 NA NA
6znl 5 A9XFX6 100.0 0.0 EM
 2020-07-29 ASN L:241 L:241 93.0 0.581 H -71.7 -28.9 38.0 0.237 0.344 K:A0PFK5:0.175
A:F2Z5G5:0.169
7ccc 4 Q923G3 100.0 0.0 X-RAY
 2021-02-03 ASN D:241 D:241 94.0 0.588 H -67.7 -23.7 26.0 0.163 0.425 B:Q12792:0.188
C:Q5RKN9:0.225
A:P68135:0.044
 HOH
 6.770
 O
 O
7pdz 1 P47757 100.0 0.0 EM
 2021-09-01 ASN A:241 E:241 88.0 0.55 H -65.7 -45.1 47.0 0.294 0.256 B:P47753:0.256
6f1u 3 A9XFX6 100.0 0.0 EM
 2018-01-17 ASN E:241 L:241 89.0 0.556 H -74.3 -31.2 59.0 0.369 0.187 D:A0PFK5:0.188
5adx 5 D2JYW4 93.31 0.0 EM
 2015-12-30 ASN L:240 L:241 94.0 0.588 H -66.1 -43.9 28.0 0.175 0.413 K:A0PFK5:0.306
A:F2Z5G5:0.106
5afu 9 D2JYW4 93.31 0.0 EM
 2015-03-11 ASN R:240 L:241 94.0 0.588 H -66.1 -43.9 28.0 0.175 0.413 Q:A0PFK5:0.306
G:F2Z5G5:0.106
5nw4 14 D2JYW4 93.31 0.0 EM
 2017-08-02 ASN V:257 Z:241 92.0 0.575 H -66.1 -43.9 29.0 0.181 0.394 K:F2Z5G5:0.106
U:A0PFK5:0.294
1izn 2 P14315 92.22 0.0 X-RAY
 2003-04-08 ASN B:241 B:241 99.0 0.619 H -73.4 -12.3 75.0 0.469 0.15 A:P13127:0.15
 HOH
 2.922
 OD1
 O
ASN D:241 D:241 101.0 0.631 H -75.8 -14.2 NA NA NA
2kz7 2 P14315 92.22 0.0 NMR
 2010-07-14 ASN B:241 B:541 99.0 0.619 H -73.3 -12.2 76.0 0.475 0.144 A:P13127:0.144
3aaa 2 P14315 92.22 0.0 X-RAY
 2010-08-04 ASN B:241 B:241 103.0 0.644 H -69.6 -10.1 69.0 0.431 0.213 A:P13127:0.212
 HOH
 2.769
 O
 O
3aae 2 P14315 92.22 0.0 X-RAY
 2010-11-17 ASN B:241 B:241 97.0 0.606 H -64.5 -20.1 63.0 0.394 0.212 A:P13127:0.212
ASN D:241 D:241 95.0 0.594 H -65.6 -17.6 NA NA NA
ASN F:241 F:241 95.0 0.594 H -61.7 -21.5 NA NA NA
ASN H:241 H:241 96.0 0.6 H -62.6 -22.3 NA NA NA
ASN J:241 J:241 97.0 0.606 H -63.7 -19.7 NA NA NA
3lk3 2 P14315 92.22 0.0 X-RAY
 2010-04-07 ASN B:241 B:241 93.0 0.581 H -84.2 7.4 61.0 0.381 0.2 A:P13127:0.2
 HOH
 3.009
 O
 O
3lk4 2 P14315 92.22 0.0 X-RAY
 2010-04-07 ASN B:241 B:241 80.0 0.5 H -58.0 -24.3 76.0 0.475 0.025 A:P13127:0.025
 HOH
 3.799
 CB
 O
ASN E:241 E:241 79.0 0.494 H -58.2 -24.6 NA NA NA
ASN H:241 H:241 82.0 0.512 H -58.7 -24.5 NA NA NA
ASN K:241 K:241 81.0 0.506 H -57.9 -24.2 NA NA NA
ASN N:241 N:241 85.0 0.531 H -58.0 -24.6 NA NA NA
ASN Q:241 Q:241 82.0 0.512 H -58.0 -24.8 NA NA NA
ASN T:241 T:241 79.0 0.494 H -58.8 -24.3 NA NA NA
ASN W:241 W:241 80.0 0.5 H -60.4 -24.0 NA NA NA
ASN Z:241 Z:241 70.0 0.438 H -58.6 -24.3 NA NA NA
ASN CA:241 2:241 80.0 0.5 H -59.2 -23.7 NA NA NA
ASN FA:241 5:241 83.0 0.519 H -58.5 -24.6 NA NA NA
ASN IA:241 8:241 82.0 0.512 H -58.7 -24.2 NA NA NA
2kxp 2 P14315 92.19 0.0 NMR
 2010-06-09 ASN B:240 B:541 83.0 0.519 H -69.8 -17.1 60.0 0.375 0.144 A:P13127:0.144
3aa0 2 P14315 99.18 0.0 X-RAY
 2010-08-04 ASN B:241 B:241 103.0 0.644 H -69.8 -19.6 56.0 0.35 0.294 A:P13127:0.294
 HOH
 2.755
 OD1
 O
3aa1 2 P14315 99.18 0.0 X-RAY
 2010-08-04 ASN B:241 B:241 101.0 0.631 H -69.4 -23.6 54.0 0.338 0.293 A:P13127:0.294
 HOH
 2.779
 OD1
 O
3aa6 2 P14315 99.18 0.0 X-RAY
 2010-08-04 ASN B:241 B:241 102.0 0.637 H -70.4 -23.2 59.0 0.369 0.268 A:P13127:0.269
 HOH
 2.947
 ND2
 O
3aa7 2 P14315 99.18 0.0 X-RAY
 2010-08-04 ASN B:241 B:241 107.0 0.669 H -71.2 -24.0 55.0 0.344 0.325 A:P13127:0.325
 HOH
 2.940
 O
 O
7ds2 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 101.0 0.631 H -70.4 -23.2 51.0 0.319 0.312 A:P13127:0.312
 HOH
 2.555
 OD1
 O
7ds3 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 112.0 0.7 H -66.9 -15.6 70.0 0.438 0.262 A:P13127:0.263
 HOH
 3.290
 O
 O
7ds4 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 107.0 0.669 H -68.6 -8.6 62.0 0.388 0.281 A:P13127:0.281
 HOH
 2.627
 O
 O
7ds6 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 101.0 0.631 H -68.3 -21.9 55.0 0.344 0.287 A:P13127:0.287
 HOH
 2.774
 O
 O
7ds8 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 103.0 0.644 H -72.2 -22.1 56.0 0.35 0.294 A:P13127:0.294
 HOH
 2.701
 OD1
 O
7dsa 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 109.0 0.681 H -67.2 -24.8 55.0 0.344 0.337 A:P13127:0.338
 MG
HOH
 4.865
2.651
 O
OD1
 MG
O
7dsb 2 P14315 99.18 0.0 X-RAY
 2021-03-03 ASN B:241 B:241 108.0 0.675 H -73.7 -4.6 68.0 0.425 0.25 A:P13127:0.25
 HOH
 6.351
 ND2
 O
3lk2 2 P14315 99.18 0.0 X-RAY
 2010-04-07 ASN B:241 B:241 119.0 0.744 H -59.6 -25.0 109.0 0.681 0.063 A:P13127:0.062
 HOH
 3.048
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p47756-f1 1 P47756 92.96 0.0 ASN A:241 A:241 84.0 0.525 H -68.3 -30.4