Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 19712051 . C A CCDS41277.1:NM_004930.3:c.163Gtg>Ttg_NP_004921.1:p.55V>L Homo sapiens capping actin protein of muscle Z-line beta subunit (CAPZB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6f1t 5 A9XFX6 100.0 0.0 EM
 2018-01-17 VAL L:55 L:55 71.0 0.458 T -97.4 -38.4 71.0 0.458 0.0
6f38 5 A9XFX6 100.0 0.0 EM
 2018-01-17 VAL L:55 L:55 58.0 NA S -100.7 -49.8 58.0 NA NA
6f3a 5 A9XFX6 100.0 0.0 EM
 2018-01-17 VAL L:55 L:55 60.0 NA T -108.3 -17.3 60.0 NA NA
6znl 5 A9XFX6 100.0 0.0 EM
 2020-07-29 VAL L:55 L:55 62.0 0.4 T -80.5 -33.0 62.0 0.4 0.0
7ccc 4 Q923G3 100.0 0.0 X-RAY
 2021-02-03 VAL D:55 D:55 59.0 0.381 T -95.8 -18.8 51.0 0.329 0.052 B:Q12792:0.052
7pdz 1 P47757 100.0 0.0 EM
 2021-09-01 VAL A:55 E:55 69.0 0.445 T -91.4 -28.7 69.0 0.445 0.0
6f1u 3 A9XFX6 100.0 0.0 EM
 2018-01-17 VAL E:55 L:55 71.0 0.458 T -97.4 -38.4 71.0 0.458 0.0
5adx 5 D2JYW4 93.31 0.0 EM
 2015-12-30 VAL L:54 L:55 71.0 0.458 T -91.0 -33.7 71.0 0.458 0.0
5afu 9 D2JYW4 93.31 0.0 EM
 2015-03-11 VAL R:54 L:55 71.0 0.458 T -91.0 -33.7 71.0 0.458 0.0
5nw4 14 D2JYW4 93.31 0.0 EM
 2017-08-02 VAL V:71 Z:55 70.0 0.452 T -91.0 -33.8 70.0 0.452 0.0
1izn 2 P14315 92.22 0.0 X-RAY
 2003-04-08 VAL B:55 B:55 68.0 0.439 T -105.2 -13.7 68.0 0.439 0.0 HOH
 5.386
 N
 O
VAL D:55 D:55 69.0 0.445 T -102.0 -10.5 NA NA NA
2kz7 2 P14315 92.22 0.0 NMR
 2010-07-14 VAL B:55 B:355 67.0 0.432 T -105.3 -13.7 67.0 0.432 0.0
3aaa 2 P14315 92.22 0.0 X-RAY
 2010-08-04 VAL B:55 B:55 75.0 0.484 T -115.1 -2.4 75.0 0.484 0.0 IPA
HOH
 7.443
6.117
 CG1
CG2
 O2
O
3aae 2 P14315 92.22 0.0 X-RAY
 2010-11-17 VAL B:55 B:55 70.0 0.452 T -92.9 -5.5 70.0 0.452 0.0
VAL D:55 D:55 68.0 0.439 T -91.7 -3.8 NA NA NA
VAL F:55 F:55 67.0 0.432 T -93.2 -4.0 NA NA NA
VAL H:55 H:55 66.0 0.426 T -92.5 -3.2 NA NA NA
VAL J:55 J:55 67.0 0.432 T -94.1 -2.7 NA NA NA
3lk3 2 P14315 92.22 0.0 X-RAY
 2010-04-07 VAL B:55 B:55 63.0 0.406 G -113.3 -4.8 63.0 0.406 0.0 HOH
 9.091
 CG1
 O
3lk4 2 P14315 92.22 0.0 X-RAY
 2010-04-07 VAL B:55 B:55 62.0 0.4 T -90.8 -12.8 62.0 0.4 0.0 HOH
 5.844
 N
 O
VAL E:55 E:55 62.0 0.4 T -90.4 -13.4 NA NA NA
VAL H:55 H:55 63.0 0.406 T -91.2 -13.6 NA NA NA
VAL K:55 K:55 64.0 0.413 T -90.5 -13.6 NA NA NA
VAL N:55 N:55 65.0 0.419 T -90.6 -13.7 NA NA NA
VAL Q:55 Q:55 64.0 0.413 T -92.7 -13.1 NA NA NA
VAL T:55 T:55 63.0 0.406 T -90.4 -13.8 NA NA NA
VAL W:55 W:55 63.0 0.406 T -90.9 -13.0 NA NA NA
VAL Z:55 Z:55 62.0 0.4 T -91.5 -13.7 NA NA NA
VAL CA:55 2:55 65.0 0.419 T -91.8 -13.3 NA NA NA
VAL FA:55 5:55 64.0 0.413 T -89.6 -13.4 NA NA NA
VAL IA:55 8:55 64.0 0.413 T -90.7 -13.2 NA NA NA
2kxp 2 P14315 92.19 0.0 NMR
 2010-06-09 VAL B:54 B:355 55.0 0.355 T -93.0 -25.4 55.0 0.355 0.0
3aa0 2 P14315 99.18 0.0 X-RAY
 2010-08-04 VAL B:55 B:55 66.0 0.426 T -109.2 -8.4 66.0 0.426 0.0 HOH
 3.255
 O
 O
3aa1 2 P14315 99.18 0.0 X-RAY
 2010-08-04 VAL B:55 B:55 70.0 0.452 T -94.1 -10.8 70.0 0.452 0.0 HOH
 3.437
 O
 O
3aa6 2 P14315 99.18 0.0 X-RAY
 2010-08-04 VAL B:55 B:55 70.0 0.452 T -108.7 -13.4 70.0 0.452 0.0 HOH
 5.513
 CG1
 O
3aa7 2 P14315 99.18 0.0 X-RAY
 2010-08-04 VAL B:55 B:55 67.0 0.432 T -98.7 -11.8 67.0 0.432 0.0 MES
HOH
 4.501
4.859
 O
CB
 C2
O
7ds2 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 77.0 0.497 T -87.3 -26.5 77.0 0.497 0.0 HOH
 3.406
 CG2
 O
7ds3 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 73.0 0.471 T -94.5 -6.2 73.0 0.471 0.0 HOH
 6.361
 C
 O
7ds4 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 71.0 0.458 T -81.5 -25.9 71.0 0.458 0.0 HOH
 3.601
 CG2
 O
7ds6 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 66.0 0.426 T -92.3 -11.3 66.0 0.426 0.0 HOH
 5.385
 N
 O
7ds8 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 63.0 0.406 T -97.1 -8.4 63.0 0.406 0.0 HOH
 2.889
 O
 O
7dsa 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 NA:NA DO NA DO DO DO NA NA NA
7dsb 2 P14315 99.18 0.0 X-RAY
 2021-03-03 VAL B:55 B:55 74.0 0.477 T -118.4 6.2 74.0 0.477 0.0 HOH
 6.793
 N
 O
3lk2 2 P14315 99.18 0.0 X-RAY
 2010-04-07 VAL B:55 B:55 71.0 0.458 T -117.5 -24.0 71.0 0.458 0.0 HOH
 5.654
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p47756-f1 1 P47756 92.96 0.0 VAL A:55 A:55 77.0 0.497 T -99.9 -11.9