Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 19746180 . T A CCDS41277.1:NM_004930.3:c.68aAa>aTa_NP_004921.1:p.23K>I Homo sapiens capping actin protein of muscle Z-line beta subunit (CAPZB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6f1t 5 A9XFX6 100.0 0.0 EM
 2018-01-17 LYS L:23 L:23 135.0 0.675 H -62.3 -46.9 132.0 0.66 0.015 K:A0PFK5:0.015
6f38 5 A9XFX6 100.0 0.0 EM
 2018-01-17 LYS L:23 L:23 66.0 NA H -72.9 -35.3 66.0 NA NA
6f3a 5 A9XFX6 100.0 0.0 EM
 2018-01-17 LYS L:23 L:23 60.0 NA H -73.1 -31.7 60.0 NA NA
6znl 5 A9XFX6 100.0 0.0 EM
 2020-07-29 LYS L:23 L:23 115.0 0.575 H -68.5 -41.8 104.0 0.52 0.055 K:A0PFK5:0.055
7ccc 4 Q923G3 100.0 0.0 X-RAY
 2021-02-03 LYS D:23 D:23 129.0 0.645 H -59.3 -44.3 107.0 0.535 0.11 C:Q5RKN9:0.11
7pdz 1 P47757 100.0 0.0 EM
 2021-09-01 LYS A:23 E:23 147.0 0.735 H -59.8 -52.9 147.0 0.735 0.0
6f1u 3 A9XFX6 100.0 0.0 EM
 2018-01-17 LYS E:23 L:23 135.0 0.675 H -62.3 -46.9 132.0 0.66 0.015 D:A0PFK5:0.015
5adx 5 D2JYW4 93.31 0.0 EM
 2015-12-30 LYS L:22 L:23 142.0 0.71 H -70.4 -46.0 131.0 0.655 0.055 K:A0PFK5:0.055
5afu 9 D2JYW4 93.31 0.0 EM
 2015-03-11 LYS R:22 L:23 142.0 0.71 H -70.4 -46.0 131.0 0.655 0.055 Q:A0PFK5:0.055
5nw4 14 D2JYW4 93.31 0.0 EM
 2017-08-02 LYS V:39 Z:23 143.0 0.715 H -70.4 -46.0 131.0 0.655 0.06 U:A0PFK5:0.06
1izn 2 P14315 92.22 0.0 X-RAY
 2003-04-08 LYS B:23 B:23 144.0 0.72 H -62.6 -46.6 141.0 0.705 0.015 A:P13127:0.015
 HOH
 2.525
 NZ
 O
LYS D:23 D:23 117.0 0.585 H -61.4 -48.5 NA NA NA
2kz7 2 P14315 92.22 0.0 NMR
 2010-07-14 LYS B:23 B:323 145.0 0.725 H -62.7 -46.6 142.0 0.71 0.015 A:P13127:0.015
3aaa 2 P14315 92.22 0.0 X-RAY
 2010-08-04 LYS B:23 B:23 112.0 0.56 H -66.8 -48.1 101.0 0.505 0.055 A:P13127:0.055
3aae 2 P14315 92.22 0.0 X-RAY
 2010-11-17 LYS B:23 B:23 139.0 0.695 H -73.1 -31.5 121.0 0.605 0.09 A:P13127:0.09
LYS D:23 D:23 142.0 0.71 H -71.6 -30.4 NA NA NA
LYS F:23 F:23 142.0 0.71 H -77.7 -28.4 NA NA NA
LYS H:23 H:23 140.0 0.7 H -74.6 -29.5 NA NA NA
LYS J:23 J:23 138.0 0.69 H -73.6 -30.9 NA NA NA
3lk3 2 P14315 92.22 0.0 X-RAY
 2010-04-07 LYS B:23 B:23 137.0 0.685 H -62.6 -39.3 128.0 0.64 0.045 A:P13127:0.045
 HOH
 2.603
 NZ
 O
3lk4 2 P14315 92.22 0.0 X-RAY
 2010-04-07 LYS B:23 B:23 130.0 0.65 H -65.8 -39.7 108.0 0.54 0.11 A:P13127:0.11
 HOH
 3.190
 N
 O
LYS E:23 E:23 128.0 0.64 H -68.4 -40.6 NA NA NA
LYS H:23 H:23 129.0 0.645 H -66.4 -37.8 NA NA NA
LYS K:23 K:23 128.0 0.64 H -70.7 -39.1 NA NA NA
LYS N:23 N:23 127.0 0.635 H -66.0 -36.7 NA NA NA
LYS Q:23 Q:23 127.0 0.635 H -67.9 -39.3 NA NA NA
LYS T:23 T:23 128.0 0.64 H -67.9 -41.1 NA NA NA
LYS W:23 W:23 128.0 0.64 H -66.3 -37.8 NA NA NA
LYS Z:23 Z:23 129.0 0.645 H -67.3 -39.7 NA NA NA
LYS CA:23 2:23 126.0 0.63 H -65.6 -40.2 NA NA NA
LYS FA:23 5:23 127.0 0.635 H -67.9 -41.2 NA NA NA
LYS IA:23 8:23 127.0 0.635 H -66.3 -36.6 NA NA NA
2kxp 2 P14315 92.19 0.0 NMR
 2010-06-09 LYS B:22 B:323 139.0 0.695 H -54.7 -54.4 134.0 0.67 0.025 A:P13127:0.025
3aa0 2 P14315 99.18 0.0 X-RAY
 2010-08-04 LYS B:23 B:23 129.0 0.645 H -67.3 -32.1 112.0 0.56 0.085 A:P13127:0.085
 HOH
 2.956
 N
 O
3aa1 2 P14315 99.18 0.0 X-RAY
 2010-08-04 LYS B:23 B:23 130.0 0.65 H -67.1 -37.2 108.0 0.54 0.11 A:P13127:0.11
 HOH
 3.171
 N
 O
3aa6 2 P14315 99.18 0.0 X-RAY
 2010-08-04 LYS B:23 B:23 124.0 0.62 H -65.4 -35.6 109.0 0.545 0.075 A:P13127:0.075
 HOH
 2.977
 N
 O
3aa7 2 P14315 99.18 0.0 X-RAY
 2010-08-04 LYS B:23 B:23 135.0 0.675 H -56.8 -51.6 115.0 0.575 0.1 A:P13127:0.1
 HOH
 4.313
 N
 O
7ds2 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 46.0 NA H -65.1 -35.1 36.0 NA NA A:P13127:NA
C:Q91YR1:NA
 HOH
 2.975
 N
 O
7ds3 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 50.0 NA H -65.0 -44.1 46.0 NA NA A:P13127:NA
 HOH
 3.857
 C
 O
7ds4 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 47.0 NA H -62.8 -43.0 42.0 NA NA A:P13127:NA
 HOH
 3.023
 N
 O
7ds6 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 129.0 0.645 H -67.4 -42.4 113.0 0.565 0.08 A:P13127:0.08
 HOH
 2.474
 NZ
 O
7ds8 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 122.0 0.61 H -66.3 -37.8 105.0 0.525 0.085 A:P13127:0.085
 HOH
 2.380
 NZ
 O
7dsa 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 133.0 0.665 H -77.5 -35.1 119.0 0.595 0.07 A:P13127:0.07
 HOH
 4.817
 N
 O
7dsb 2 P14315 99.18 0.0 X-RAY
 2021-03-03 LYS B:23 B:23 98.0 0.49 H -64.3 -35.2 95.0 0.475 0.015 A:P13127:0.015
 HOH
 2.686
 N
 O
3lk2 2 P14315 99.18 0.0 X-RAY
 2010-04-07 LYS B:23 B:23 127.0 0.635 H -65.5 -37.1 110.0 0.55 0.085 A:P13127:0.085
 HOH
 3.042
 NZ
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p47756-f1 1 P47756 92.96 0.0 LYS A:23 A:23 122.0 0.61 H -69.5 -44.1