Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 207288808 . A C CCDS1477.1:NM_000715.3:c.376Att>Ctt_NP_000706.1:p.126I>L Homo sapiens complement component 4 binding protein alpha (C4BPA), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5hyp 1 P04003 100.0 5e-84 X-RAY
2016-07-20 ILE A:82 A:78 63.0 0.36 E -83.1 107.7 63.0 0.36 0.0
5hyt 2 P04003 100.0 5e-84 X-RAY
2016-07-20 ILE B:82 B:78 69.0 0.394 E -71.7 124.0 1.0 0.006 0.388 C:Q54901:0.383
A:Q54901:0.04
HOH
7.312
CG2
O
ILE D:82 D:78 62.0 0.354 E -72.2 130.6 0.0 0.0 0.354 C:Q54901:0.034
A:Q54901:0.349
HOH
6.621
C
O
ILE E:82 F:78 66.0 0.377 E -73.0 127.9 NA NA NA
ILE G:82 H:78 65.0 0.371 E -73.8 129.9 NA NA NA
5hyu 2 P04003 100.0 5e-84 X-RAY
2016-07-20 ILE B:82 B:78 76.0 0.434 E -76.9 128.9 42.0 0.24 0.194 A:P50468:0.194
HOH
2.822
N
O
5i0q 2 P04003 100.0 5e-84 X-RAY
2016-07-20 ILE B:82 B:78 78.0 0.446 E -86.7 131.9 18.0 0.103 0.343 A:P50468:0.183
A:P50468:0.194
HOH
2.750
N
O
5hzp 2 P04003 98.39 1e-83 X-RAY
2016-07-20 ILE C:82 B:78 67.0 0.383 -100.8 93.0 12.0 0.069 0.314 A:P16947:0.126
B:P16947:0.223
HOH
3.927
CB
O
ILE D:82 D:78 65.0 0.371 -110.9 97.7 16.0 0.091 0.28 A:P16947:0.194
B:P16947:0.126

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04003-f1 1 P04003 100.0 0.0 ILE A:126 A:126 69.0 0.394 E -84.1 104.8