Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226549713 . C A CCDS1554.1:NM_001618.3:c.2920Ggg>Tgg_NP_001609.2:p.974G>W Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4opx 2 P09874 100.0 0.0 X-RAY
2014-07-02 GLY B:457 C:974 40.0 0.533 E -71.8 129.5 40.0 0.533 0.0
GLY D:457 F:974 40.0 0.533 E -71.8 129.5 NA NA NA
4oqa 2 P09874 100.0 0.0 X-RAY
2014-07-02 GLY B:457 C:974 40.0 0.533 E -71.5 130.1 40.0 0.533 0.0
GLY D:457 F:974 40.0 0.533 E -71.4 130.0 NA NA NA
4oqb 2 P09874 100.0 0.0 X-RAY
2014-07-02 GLY B:457 C:974 40.0 0.533 E -72.0 129.3 40.0 0.533 0.0
GLY D:457 F:974 40.0 0.533 E -71.9 129.2 NA NA NA
4dqy 3 P09874 99.8 0.0 X-RAY
2012-05-30 GLY C:458 C:974 43.0 0.573 E -64.7 126.6 43.0 0.573 0.0
GLY F:458 F:974 42.0 0.56 E -64.2 126.0 NA NA NA
4zzz 1 P09874 100.0 0.0 X-RAY
2015-08-12 GLY A:322 A:974 34.0 0.453 E -71.7 131.6 34.0 0.453 0.0 HOH
4.792
CA
O
GLY B:322 B:974 35.0 0.467 E -52.3 112.3 35.0 0.467 0.0 HOH
4.715
CA
O
5a00 1 P09874 100.0 0.0 X-RAY
2015-08-12 GLY A:322 A:974 32.0 0.427 E -55.1 114.4 32.0 0.427 0.0 HOH
9.079
CA
O
4xhu 1 P09874 99.44 0.0 X-RAY
2015-09-30 GLY A:319 C:974 37.0 0.493 E -66.2 118.9 37.0 0.493 0.0 HOH
5.495
O
O
GLY C:319 A:974 32.0 0.427 E -61.2 134.5 NA NA NA
6xvw 1 P09874 100.0 0.0 X-RAY
2020-06-03 GLY A:314 A:974 19.0 0.253 E -60.3 118.5 19.0 0.253 0.0 HOH
3.321
N
O
GLY B:314 B:974 19.0 0.253 E -60.9 124.8 NA NA NA
7kk2 1 P09874 99.72 0.0 X-RAY
2021-01-06 GLY A:315 A:974 32.0 0.427 E -64.2 131.8 32.0 0.427 0.0 HOH
2.741
O
O
GLY B:315 B:974 41.0 0.547 E -67.7 109.0 NA NA NA
7kk3 1 P09874 99.72 0.0 X-RAY
2021-01-06 GLY A:315 A:974 31.0 0.413 E -60.6 122.1 31.0 0.413 0.0 HOH
6.328
O
O
GLY B:315 B:974 36.0 0.48 E -55.2 107.1 NA NA NA
GLY C:315 C:974 34.0 0.453 E -58.2 117.7 NA NA NA
GLY D:315 D:974 32.0 0.427 E -54.7 122.8 NA NA NA
7kk4 1 P09874 99.72 0.0 X-RAY
2021-01-06 GLY A:315 A:974 32.0 0.427 E -66.3 106.2 32.0 0.427 0.0 HOH
9.340
CA
O
GLY B:315 B:974 32.0 0.427 E -69.7 115.5 NA NA NA
7kk5 1 P09874 99.72 0.0 X-RAY
2021-01-06 GLY A:315 A:974 30.0 0.4 E -65.0 128.9 30.0 0.4 0.0 HOH
5.184
CA
O
GLY B:315 B:974 34.0 0.453 E -61.5 124.4 NA NA NA
GLY C:315 C:974 35.0 0.467 E -65.0 119.9 NA NA NA
GLY D:315 D:974 34.0 0.453 E -65.3 132.8 NA NA NA
7kk6 1 P09874 99.72 0.0 X-RAY
2021-01-06 GLY A:315 A:974 34.0 0.453 E -61.5 134.4 34.0 0.453 0.0 HOH
6.590
C
O
GLY B:315 B:974 44.0 0.587 E -55.3 107.6 NA NA NA
7aaa 1 P09874 99.43 0.0 X-RAY
2021-01-13 GLY A:315 A:974 37.0 0.493 E -63.9 128.0 37.0 0.493 0.0 HOH
2.672
O
O
GLY B:315 B:974 38.0 0.507 E -62.4 132.1 NA NA NA
7aab 1 P09874 99.43 0.0 X-RAY
2021-01-13 GLY A:315 A:974 35.0 0.467 E -57.7 115.2 35.0 0.467 0.0 HOH
7.766
N
O
GLY B:315 B:974 35.0 0.467 E -57.8 115.4 NA NA NA
7aac 1 P09874 99.43 0.0 X-RAY
2021-01-13 GLY A:315 A:974 37.0 0.493 E -60.1 131.0 37.0 0.493 0.0 HOH
2.672
O
O
GLY B:315 B:974 39.0 0.52 E -59.7 130.3 NA NA NA
7aad 1 P09874 99.43 0.0 X-RAY
2021-01-13 GLY A:315 A:974 39.0 0.52 E -56.9 123.6 39.0 0.52 0.0 HOH
6.891
CA
O
GLY B:315 B:974 38.0 0.507 E -56.8 123.2 NA NA NA
7onr 1 P09874 99.43 0.0 X-RAY
2021-09-15 GLY A:315 A:974 40.0 0.533 E -65.5 127.8 40.0 0.533 0.0 HOH
2.721
O
O
GLY B:315 B:974 39.0 0.52 E -59.3 125.9 NA NA NA
7ons 1 P09874 99.43 0.0 X-RAY
2021-09-15 GLY A:315 A:974 38.0 0.507 E -67.2 129.8 38.0 0.507 0.0 HOH
2.791
O
O
GLY B:315 B:974 38.0 0.507 E -64.6 128.2 NA NA NA
7ont 1 P09874 99.43 0.0 X-RAY
2021-09-15 GLY A:315 A:974 37.0 0.493 E -62.9 128.9 37.0 0.493 0.0 HOH
2.964
N
O
GLY B:315 B:974 40.0 0.533 E -62.2 129.2 NA NA NA
5ha9 1 P09874 100.0 0.0 X-RAY
2016-03-09 GLY A:314 A:313 38.0 0.507 E -61.3 112.6 38.0 0.507 0.0
GLY B:314 B:313 37.0 0.493 E -79.6 127.1 37.0 0.493 0.0 SO4
9.864
N
O2
4hhy 1 P09874 99.43 0.0 X-RAY
2013-03-27 GLY A:318 A:313 33.0 0.44 E -70.6 120.5 NA NA NA
GLY B:318 B:313 26.0 0.347 E -68.7 135.2 NA NA NA
GLY C:318 C:313 32.0 0.427 E -66.9 111.7 32.0 0.427 0.0
GLY D:318 D:313 29.0 0.387 E -58.2 65.4 NA NA NA
4hhz 1 P09874 99.43 0.0 X-RAY
2013-03-27 GLY A:318 A:313 25.0 0.333 E -62.3 140.9 NA NA NA
GLY B:318 B:313 34.0 0.453 E -61.6 110.5 NA NA NA
GLY C:318 C:313 30.0 0.4 E -69.9 125.3 30.0 0.4 0.0
GLY D:318 D:313 28.0 0.373 E -55.0 105.7 NA NA NA
5xsr 1 P09874 99.43 0.0 X-RAY
2018-04-25 GLY A:318 A:313 34.0 0.453 E -64.5 126.4 34.0 0.453 0.0 HOH
5.671
O
O
5xsu 1 P09874 99.43 0.0 X-RAY
2018-04-25 GLY A:318 A:313 28.0 0.373 E -66.8 125.2 28.0 0.373 0.0 HOH
6.935
CA
O
GLY B:318 B:313 38.0 0.507 E -62.8 127.0 NA NA NA
GLY C:318 C:313 33.0 0.44 E -60.5 126.3 NA NA NA
GLY D:318 D:313 37.0 0.493 E -63.2 127.1 NA NA NA
1uk0 1 P09874 100.0 0.0 X-RAY
2004-01-27 GLY A:313 A:313 30.0 0.4 E -23.5 86.2 30.0 0.4 0.0 HOH
6.598
O
O
GLY B:313 B:313 40.0 0.533 E -26.2 110.4 NA NA NA
1uk1 1 P09874 100.0 0.0 X-RAY
2004-09-14 GLY A:313 A:974 20.0 0.267 E -54.2 93.2 20.0 0.267 0.0 HOH
6.684
O
O
GLY B:313 B:974 28.0 0.373 -56.9 83.8 NA NA NA
1wok 1 P09874 100.0 0.0 X-RAY
2005-03-15 GLY A:313 A:974 30.0 0.4 E -92.5 124.4 30.0 0.4 0.0
GLY B:313 B:974 28.0 0.373 E -50.8 139.8 28.0 0.373 0.0
GLY C:313 C:974 31.0 0.413 E -48.3 139.0 31.0 0.413 0.0
GLY D:313 D:974 24.0 0.32 -49.3 115.5 24.0 0.32 0.0
2rcw 1 P09874 100.0 0.0 X-RAY
2008-09-23 GLY A:313 A:313 27.0 0.36 E -64.3 127.4 27.0 0.36 0.0 HOH
3.297
O
O
6vkk 1 P09874 99.72 0.0 X-RAY
2020-06-17 GLY A:335 A:974 36.0 0.48 E -60.3 123.4 36.0 0.48 0.0 HOH
6.907
CA
O
GLY B:335 D:974 30.0 0.4 E -58.4 122.6 NA NA NA
GLY C:335 C:974 28.0 0.373 E -60.1 122.0 NA NA NA
GLY D:335 B:974 26.0 0.347 E -59.5 121.8 NA NA NA
6vko 1 P09874 99.72 0.0 X-RAY
2020-06-17 GLY A:335 A:974 34.0 0.453 E -53.7 120.5 34.0 0.453 0.0
GLY B:335 B:974 33.0 0.44 E -53.0 120.6 NA NA NA
GLY C:335 C:974 33.0 0.44 E -53.5 120.9 NA NA NA
GLY D:335 D:974 34.0 0.453 E -52.9 120.2 NA NA NA
6vkq 1 P09874 99.72 0.0 X-RAY
2020-06-17 GLY A:335 A:974 40.0 0.533 E -50.1 110.1 40.0 0.533 0.0
GLY B:335 B:974 39.0 0.52 E -50.1 110.3 NA NA NA
GLY C:335 C:974 40.0 0.533 E -50.1 110.3 NA NA NA
GLY D:335 D:974 40.0 0.533 E -49.8 110.0 NA NA NA
4gv7 1 P09874 99.43 0.0 X-RAY
2013-06-19 GLY A:314 A:974 39.0 0.52 E -57.7 116.8 39.0 0.52 0.0
GLY B:314 B:974 32.0 0.427 E -56.8 122.5 NA NA NA
GLY C:314 C:974 27.0 0.36 E -57.9 106.6 NA NA NA
GLY D:314 D:974 39.0 0.52 E -60.6 112.5 NA NA NA
4r5w 1 P09874 99.43 0.0 X-RAY
2015-09-02 GLY A:314 A:974 37.0 0.493 E -48.8 109.3 37.0 0.493 0.0
GLY B:314 B:974 39.0 0.52 E -49.1 109.0 NA NA NA
4r6e 1 P09874 99.43 0.0 X-RAY
2015-09-09 GLY A:314 A:974 34.0 0.453 E -61.8 116.8 34.0 0.453 0.0 HOH
6.289
N
O
GLY B:314 B:974 33.0 0.44 E -61.1 117.0 NA NA NA
GLY C:314 C:974 34.0 0.453 E -61.2 118.0 NA NA NA
GLY D:314 D:974 35.0 0.467 E -61.0 117.9 NA NA NA
6ghk 1 P09874 99.43 0.0 X-RAY
2019-05-22 GLY A:314 A:974 34.0 0.453 E -60.7 124.1 34.0 0.453 0.0 HOH
7.338
CA
O
GLY B:314 B:974 12.0 0.16 E -61.3 125.2 NA NA NA
4pjt 1 P09874 100.0 0.0 X-RAY
2014-09-24 GLY A:333 A:974 37.0 0.493 E -64.6 126.9 37.0 0.493 0.0 HOH
4.871
CA
O
GLY B:333 B:974 35.0 0.467 E -65.8 125.4 NA NA NA
GLY C:333 C:974 36.0 0.48 E -66.5 124.7 NA NA NA
GLY D:333 D:974 40.0 0.533 E -65.4 127.2 NA NA NA
4rv6 1 P09874 99.71 0.0 X-RAY
2015-12-09 GLY A:315 A:974 40.0 0.533 E -59.7 100.3 40.0 0.533 0.0
GLY B:315 B:974 38.0 0.507 E -60.3 100.0 NA NA NA
GLY C:315 C:974 39.0 0.52 E -60.6 99.2 NA NA NA
GLY D:315 D:974 39.0 0.52 E -60.9 99.7 NA NA NA
4uxb 1 P09874 99.71 0.0 X-RAY
2015-09-02 GLY A:315 A:974 37.0 0.493 E -63.8 118.6 37.0 0.493 0.0
GLY B:315 B:974 36.0 0.48 E -63.8 118.4 NA NA NA
4l6s 1 P09874 99.71 0.0 X-RAY
2013-08-07 GLY A:316 A:974 36.0 0.48 E -64.5 128.7 36.0 0.48 0.0 HOH
6.449
N
O
GLY B:316 B:974 31.0 0.413 E -70.0 124.6 NA NA NA
4und 1 P09874 99.71 0.0 X-RAY
2015-06-17 GLY A:336 A:974 31.0 0.413 E -73.8 123.2 31.0 0.413 0.0 HOH
9.492
CA
O
GLY B:336 B:974 30.0 0.4 E -73.3 123.7 NA NA NA
5kpn 1 P09874 99.71 0.0 X-RAY
2016-12-21 GLY A:315 A:974 39.0 0.52 E -67.8 124.6 39.0 0.52 0.0
GLY B:315 B:974 38.0 0.507 E -66.8 129.7 NA NA NA
5kpo 1 P09874 99.71 0.0 X-RAY
2016-12-21 GLY A:315 A:974 35.0 0.467 E -61.9 127.1 35.0 0.467 0.0
GLY B:315 B:974 43.0 0.573 E -73.0 106.0 NA NA NA
5wrq 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 37.0 0.493 E -63.0 125.9 37.0 0.493 0.0
GLY B:315 B:974 43.0 0.573 E -72.5 102.3 NA NA NA
5wry 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 37.0 0.493 E -65.1 125.9 37.0 0.493 0.0 HOH
6.771
N
O
GLY B:315 B:974 32.0 0.427 E -68.4 125.8 NA NA NA
5wrz 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 35.0 0.467 E -72.8 133.5 35.0 0.467 0.0
GLY B:315 B:974 37.0 0.493 E -73.8 134.5 NA NA NA
5ws0 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 37.0 0.493 E -61.9 125.5 37.0 0.493 0.0
GLY B:315 B:974 37.0 0.493 E -67.5 131.0 NA NA NA
5ws1 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 36.0 0.48 E -70.8 130.7 36.0 0.48 0.0
GLY B:315 B:974 37.0 0.493 E -76.1 134.3 NA NA NA
5wtc 1 P09874 99.71 0.0 X-RAY
2017-01-25 GLY A:315 A:974 37.0 0.493 E -71.5 135.2 37.0 0.493 0.0
GLY B:315 B:974 39.0 0.52 E -78.5 127.2 NA NA NA
2rd6 1 P09874 99.71 0.0 X-RAY
2008-09-23 GLY A:313 A:313 30.0 0.4 E -73.0 123.5 30.0 0.4 0.0 HOH
3.122
N
O
3gjw 1 P09874 99.71 0.0 X-RAY
2010-03-09 GLY A:313 A:313 29.0 0.387 E -58.2 127.1 29.0 0.387 0.0 HOH
6.703
N
O
3gn7 1 P09874 99.71 0.0 X-RAY
2010-03-16 GLY A:313 A:313 29.0 0.387 141.5 102.1 29.0 0.387 0.0 HOH
3.972
CA
O
3l3l 1 P09874 99.71 0.0 X-RAY
2010-12-22 GLY A:313 A:313 34.0 0.453 E -70.0 123.1 34.0 0.453 0.0 HOH
9.512
CA
O
3l3m 1 P09874 99.71 0.0 X-RAY
2010-06-23 GLY A:313 A:313 31.0 0.413 E -61.1 131.1 31.0 0.413 0.0 HOH
4.846
O
O
5kpp 1 P09874 99.71 0.0 X-RAY
2016-11-30 GLY A:313 A:974 36.0 0.48 E -64.2 134.4 36.0 0.48 0.0 HOH
6.573
C
O
GLY B:313 B:974 46.0 0.613 E -77.7 93.6 NA NA NA
5kpq 1 P09874 99.71 0.0 X-RAY
2016-12-14 GLY A:313 A:974 38.0 0.507 E -65.5 126.6 38.0 0.507 0.0 HOH
6.615
C
O
GLY B:313 B:974 51.0 0.68 E -73.3 94.6 NA NA NA
7cmw 1 P09874 99.71 0.0 X-RAY
2020-12-16 GLY A:317 A:974 36.0 0.48 E -72.4 126.0 36.0 0.48 0.0
GLY B:317 B:974 37.0 0.493 E -71.1 127.8 NA NA NA
5xst 1 P09874 99.43 0.0 X-RAY
2018-04-25 GLY A:314 A:313 32.0 0.427 E -62.9 116.3 32.0 0.427 0.0 HOH
9.548
CA
O
6i8m 1 P26446 86.7 0.0 X-RAY
2019-05-01 GLY A:323 A:974 35.0 0.467 E -73.6 121.1 35.0 0.467 0.0 HOH
7.164
CA
O
6i8t 1 P26446 86.7 0.0 X-RAY
2019-05-01 GLY A:323 A:974 32.0 0.427 E -72.4 135.5 32.0 0.427 0.0 HOH
7.797
N
O
1a26 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:321 A:974 25.0 0.333 E -58.9 124.5 25.0 0.333 0.0 HOH
6.013
N
O
1pax 1 P26446 86.67 0.0 X-RAY
1997-05-15 GLY A:321 A:974 28.0 0.373 E -58.5 110.4 28.0 0.373 0.0 HOH
7.504
CA
O
2paw 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:321 A:974 32.0 0.427 E -60.4 120.1 32.0 0.427 0.0 HOH
7.786
CA
O
2pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:321 A:974 31.0 0.413 E -57.8 108.6 31.0 0.413 0.0 HOH
7.622
CA
O
3pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:321 A:974 34.0 0.453 E -59.9 97.3 34.0 0.453 0.0 HOH
7.526
CA
O
4pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:321 A:974 32.0 0.427 E -63.7 99.5 32.0 0.427 0.0 HOH
8.010
N
O
1efy 1 P26446 86.86 0.0 X-RAY
2001-01-17 GLY A:313 A:974 36.0 0.48 E -52.5 105.5 36.0 0.48 0.0 HOH
7.510
CA
O
6m3i 2 P09874 100.0 3e-162 X-RAY
2021-03-03 GLY B:213 B:974 33.0 0.44 E -73.8 135.9 33.0 0.44 0.0 HOH
2.691
O
O
5ds3 1 P09874 100.0 5e-160 X-RAY
2016-07-27 GLY A:233 A:974 30.0 0.4 E -59.7 122.1 30.0 0.4 0.0 HOH
7.204
CA
O
6bhv 1 P09874 100.0 5e-160 X-RAY
2018-02-28 GLY A:233 A:974 33.0 0.44 E -64.8 129.6 33.0 0.44 0.0 HOH
7.543
CA
O
GLY B:233 B:974 29.0 0.387 E -64.8 129.3 NA NA NA
GLY C:233 C:974 39.0 0.52 E -65.1 129.6 NA NA NA
GLY D:233 D:974 42.0 0.56 E -63.0 129.6 NA NA NA
6nrf 1 P09874 100.0 5e-160 X-RAY
2019-08-14 GLY A:233 A:974 35.0 0.467 E -60.8 129.3 35.0 0.467 0.0 HOH
5.243
O
O
6nrg 1 P09874 100.0 5e-160 X-RAY
2019-08-14 GLY A:233 A:974 35.0 0.467 E -63.1 131.3 35.0 0.467 0.0 DMS
DMS
HOH
9.026
9.952
3.174
CA
C
N
O
S
O
6nrh 1 P09874 100.0 5e-160 X-RAY
2019-08-14 GLY A:233 A:974 35.0 0.467 E -64.6 132.9 35.0 0.467 0.0 HOH
2.418
O
O
6nri 1 P09874 100.0 5e-160 X-RAY
2019-08-14 GLY A:233 A:974 34.0 0.453 E -72.6 134.8 34.0 0.453 0.0 HOH
5.272
CA
O
6nrj 1 P09874 100.0 5e-160 X-RAY
2019-08-14 GLY A:233 A:974 37.0 0.493 E -66.8 133.6 37.0 0.493 0.0 HOH
5.137
CA
O
6ntu 1 P09874 100.0 5e-160 X-RAY
2020-02-05 GLY A:233 A:974 37.0 0.493 E -61.9 124.8 37.0 0.493 0.0 HOH
5.172
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 GLY A:974 A:974 38.0 0.507 E -63.5 124.0