Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226549722 . G A CCDS1554.1:NM_001618.3:c.2911Ctt>Ttt_NP_001609.2:p.971L>F Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4opx 2 P09874 100.0 0.0 X-RAY
2014-07-02 LEU B:454 C:971 6.0 0.035 -98.7 21.9 6.0 0.035 0.0
LEU D:454 F:971 6.0 0.035 -98.7 21.9 NA NA NA
4oqa 2 P09874 100.0 0.0 X-RAY
2014-07-02 LEU B:454 C:971 6.0 0.035 -99.6 22.5 6.0 0.035 0.0
LEU D:454 F:971 6.0 0.035 -99.6 22.4 NA NA NA
4oqb 2 P09874 100.0 0.0 X-RAY
2014-07-02 LEU B:454 C:971 6.0 0.035 -99.3 22.3 6.0 0.035 0.0
LEU D:454 F:971 6.0 0.035 -99.3 22.2 NA NA NA
4dqy 3 P09874 99.8 0.0 X-RAY
2012-05-30 LEU C:455 C:971 5.0 0.029 -95.3 30.4 5.0 0.029 0.0
LEU F:455 F:971 5.0 0.029 -95.1 29.3 NA NA NA
4zzz 1 P09874 100.0 0.0 X-RAY
2015-08-12 LEU A:319 A:971 4.0 0.024 -93.5 11.8 4.0 0.024 0.0 SO4
HOH
9.914
3.440
N
CD1
O3
O
LEU B:319 B:971 5.0 0.029 -93.2 15.2 5.0 0.029 0.0 HOH
3.307
N
O
5a00 1 P09874 100.0 0.0 X-RAY
2015-08-12 LEU A:319 A:971 4.0 0.024 -90.0 13.6 4.0 0.024 0.0
4xhu 1 P09874 99.44 0.0 X-RAY
2015-09-30 LEU A:316 C:971 4.0 0.024 -100.6 22.7 4.0 0.024 0.0 HOH
7.381
CD1
O
LEU C:316 A:971 6.0 0.035 -95.3 10.2 NA NA NA
6xvw 1 P09874 100.0 0.0 X-RAY
2020-06-03 LEU A:311 A:971 5.0 0.029 -94.2 19.6 5.0 0.029 0.0 HOH
3.347
N
O
LEU B:311 B:971 7.0 0.041 -92.8 18.7 NA NA NA
7kk2 1 P09874 99.72 0.0 X-RAY
2021-01-06 LEU A:312 A:971 5.0 0.029 -95.4 13.5 5.0 0.029 0.0 HOH
3.556
N
O
LEU B:312 B:971 3.0 0.018 -84.7 10.8 NA NA NA
7kk3 1 P09874 99.72 0.0 X-RAY
2021-01-06 LEU A:312 A:971 13.0 0.076 -94.8 11.1 13.0 0.076 0.0 HOH
3.365
N
O
LEU B:312 B:971 2.0 0.012 -94.6 34.9 NA NA NA
LEU C:312 C:971 4.0 0.024 -83.0 17.3 NA NA NA
LEU D:312 D:971 16.0 0.094 -86.7 10.2 NA NA NA
7kk4 1 P09874 99.72 0.0 X-RAY
2021-01-06 LEU A:312 A:971 10.0 0.059 -77.7 7.1 10.0 0.059 0.0 HOH
8.436
N
O
LEU B:312 B:971 10.0 0.059 -88.1 11.5 NA NA NA
7kk5 1 P09874 99.72 0.0 X-RAY
2021-01-06 LEU A:312 A:971 10.0 0.059 -89.2 8.7 10.0 0.059 0.0 HOH
3.577
N
O
LEU B:312 B:971 3.0 0.018 -88.6 21.9 NA NA NA
LEU C:312 C:971 4.0 0.024 -84.8 11.0 NA NA NA
LEU D:312 D:971 17.0 0.1 -92.7 8.3 NA NA NA
7kk6 1 P09874 99.72 0.0 X-RAY
2021-01-06 LEU A:312 A:971 1.0 0.006 -87.3 9.7 1.0 0.006 0.0 HOH
3.593
N
O
LEU B:312 B:971 1.0 0.006 -80.7 17.8 NA NA NA
7aaa 1 P09874 99.43 0.0 X-RAY
2021-01-13 LEU A:312 A:971 4.0 0.024 -92.4 13.1 4.0 0.024 0.0 HOH
3.394
CD1
O
LEU B:312 B:971 4.0 0.024 -92.7 14.4 NA NA NA
7aab 1 P09874 99.43 0.0 X-RAY
2021-01-13 LEU A:312 A:971 8.0 0.047 -93.9 23.2 8.0 0.047 0.0 HOH
3.556
N
O
LEU B:312 B:971 18.0 0.106 -93.8 23.1 NA NA NA
7aac 1 P09874 99.43 0.0 X-RAY
2021-01-13 LEU A:312 A:971 5.0 0.029 -92.7 19.0 5.0 0.029 0.0 HOH
3.506
N
O
LEU B:312 B:971 4.0 0.024 -93.3 19.3 NA NA NA
7aad 1 P09874 99.43 0.0 X-RAY
2021-01-13 LEU A:312 A:971 2.0 0.012 -86.1 15.8 2.0 0.012 0.0 HOH
3.576
N
O
LEU B:312 B:971 4.0 0.024 -85.9 16.0 NA NA NA
7onr 1 P09874 99.43 0.0 X-RAY
2021-09-15 LEU A:312 A:971 7.0 0.041 -91.7 16.7 7.0 0.041 0.0 HOH
3.456
N
O
LEU B:312 B:971 2.0 0.012 -91.9 13.3 NA NA NA
7ons 1 P09874 99.43 0.0 X-RAY
2021-09-15 LEU A:312 A:971 5.0 0.029 -88.3 17.6 5.0 0.029 0.0 HOH
3.310
CD1
O
LEU B:312 B:971 3.0 0.018 -88.2 17.6 NA NA NA
7ont 1 P09874 99.43 0.0 X-RAY
2021-09-15 LEU A:312 A:971 3.0 0.018 -93.6 14.9 3.0 0.018 0.0 HOH
3.543
CD1
O
LEU B:312 B:971 1.0 0.006 -93.2 14.9 NA NA NA
5ha9 1 P09874 100.0 0.0 X-RAY
2016-03-09 LEU A:311 A:310 13.0 0.076 -114.5 28.8 13.0 0.076 0.0
LEU B:311 B:310 19.0 0.112 -121.8 53.3 19.0 0.112 0.0 SO4
7.075
O
O2
4hhy 1 P09874 99.43 0.0 X-RAY
2013-03-27 LEU A:315 A:310 4.0 0.024 -97.5 0.2 NA NA NA
LEU B:315 B:310 7.0 0.041 -88.4 22.7 NA NA NA
LEU C:315 C:310 4.0 0.024 -87.5 13.1 4.0 0.024 0.0
LEU D:315 D:310 8.0 0.047 -90.8 20.3 NA NA NA
4hhz 1 P09874 99.43 0.0 X-RAY
2013-03-27 LEU A:315 A:310 4.0 0.024 -81.3 13.2 NA NA NA
LEU B:315 B:310 6.0 0.035 -97.7 11.0 NA NA NA
LEU C:315 C:310 6.0 0.035 -93.9 26.0 6.0 0.035 0.0
LEU D:315 D:310 6.0 0.035 -107.6 18.2 NA NA NA
5xsr 1 P09874 99.43 0.0 X-RAY
2018-04-25 LEU A:315 A:310 10.0 0.059 -90.1 1.9 10.0 0.059 0.0 HOH
3.283
N
O
5xsu 1 P09874 99.43 0.0 X-RAY
2018-04-25 LEU A:315 A:310 20.0 0.118 -89.1 7.2 20.0 0.118 0.0 SO4
9.776
N
O1
LEU B:315 B:310 13.0 0.076 -91.9 7.4 NA NA NA
LEU C:315 C:310 9.0 0.053 -87.6 -6.5 NA NA NA
LEU D:315 D:310 15.0 0.088 -85.0 -7.4 NA NA NA
1uk0 1 P09874 100.0 0.0 X-RAY
2004-01-27 LEU A:310 A:310 14.0 0.082 -82.7 44.7 14.0 0.082 0.0 HOH
6.896
CD2
O
LEU B:310 B:310 6.0 0.035 -89.1 6.8 NA NA NA
1uk1 1 P09874 100.0 0.0 X-RAY
2004-09-14 LEU A:310 A:971 12.0 0.071 -84.4 61.9 12.0 0.071 0.0 HOH
4.058
N
O
LEU B:310 B:971 17.0 0.1 -93.8 -30.3 NA NA NA
1wok 1 P09874 100.0 0.0 X-RAY
2005-03-15 LEU A:310 A:971 13.0 0.076 -96.7 8.2 13.0 0.076 0.0
LEU B:310 B:971 25.0 0.147 -74.6 1.4 25.0 0.147 0.0
LEU C:310 C:971 9.0 0.053 -84.1 16.6 9.0 0.053 0.0
LEU D:310 D:971 18.0 0.106 -100.0 49.1 18.0 0.106 0.0
2rcw 1 P09874 100.0 0.0 X-RAY
2008-09-23 LEU A:310 A:310 9.0 0.053 -86.7 35.8 9.0 0.053 0.0 HOH
7.750
N
O
6vkk 1 P09874 99.72 0.0 X-RAY
2020-06-17 LEU A:332 A:971 8.0 0.047 -95.2 13.8 8.0 0.047 0.0 HOH
3.484
N
O
LEU B:332 D:971 9.0 0.053 -95.7 14.9 NA NA NA
LEU C:332 C:971 5.0 0.029 -95.3 16.2 NA NA NA
LEU D:332 B:971 7.0 0.041 -95.4 15.4 NA NA NA
6vko 1 P09874 99.72 0.0 X-RAY
2020-06-17 LEU A:332 A:971 8.0 0.047 -111.8 13.4 8.0 0.047 0.0 HOH
9.861
CD1
O
LEU B:332 B:971 8.0 0.047 -111.8 13.2 NA NA NA
LEU C:332 C:971 8.0 0.047 -110.8 13.7 NA NA NA
LEU D:332 D:971 7.0 0.041 -112.0 13.7 NA NA NA
6vkq 1 P09874 99.72 0.0 X-RAY
2020-06-17 LEU A:332 A:971 7.0 0.041 -137.1 22.5 7.0 0.041 0.0 SO4
9.954
N
O4
LEU B:332 B:971 7.0 0.041 -137.1 23.0 NA NA NA
LEU C:332 C:971 6.0 0.035 -137.3 23.0 NA NA NA
LEU D:332 D:971 8.0 0.047 -137.3 22.9 NA NA NA
4gv7 1 P09874 99.43 0.0 X-RAY
2013-06-19 LEU A:311 A:971 8.0 0.047 -96.7 9.5 8.0 0.047 0.0
LEU B:311 B:971 6.0 0.035 -88.9 21.0 NA NA NA
LEU C:311 C:971 5.0 0.029 -86.1 14.3 NA NA NA
LEU D:311 D:971 4.0 0.024 -96.7 14.3 NA NA NA
4r5w 1 P09874 99.43 0.0 X-RAY
2015-09-02 LEU A:311 A:971 3.0 0.018 -85.9 18.2 3.0 0.018 0.0
LEU B:311 B:971 4.0 0.024 -85.9 18.4 NA NA NA
4r6e 1 P09874 99.43 0.0 X-RAY
2015-09-09 LEU A:311 A:971 4.0 0.024 -89.2 16.8 4.0 0.024 0.0 HOH
4.642
O
O
LEU B:311 B:971 4.0 0.024 -89.0 17.3 NA NA NA
LEU C:311 C:971 5.0 0.029 -89.0 15.1 NA NA NA
LEU D:311 D:971 4.0 0.024 -89.1 16.3 NA NA NA
6ghk 1 P09874 99.43 0.0 X-RAY
2019-05-22 LEU A:311 A:971 4.0 0.024 -92.9 16.6 4.0 0.024 0.0 HOH
3.300
CD1
O
LEU B:311 B:971 4.0 0.024 -91.9 17.4 NA NA NA
4pjt 1 P09874 100.0 0.0 X-RAY
2014-09-24 LEU A:330 A:971 5.0 0.029 -94.0 12.6 5.0 0.029 0.0 HOH
3.261
N
O
LEU B:330 B:971 8.0 0.047 -92.3 13.3 NA NA NA
LEU C:330 C:971 5.0 0.029 -94.4 12.3 NA NA NA
LEU D:330 D:971 15.0 0.088 -91.9 11.0 NA NA NA
4rv6 1 P09874 99.71 0.0 X-RAY
2015-12-09 LEU A:312 A:971 6.0 0.035 -83.8 11.7 6.0 0.035 0.0
LEU B:312 B:971 5.0 0.029 -83.8 11.4 NA NA NA
LEU C:312 C:971 6.0 0.035 -83.7 12.6 NA NA NA
LEU D:312 D:971 7.0 0.041 -84.2 12.5 NA NA NA
4uxb 1 P09874 99.71 0.0 X-RAY
2015-09-02 LEU A:312 A:971 10.0 0.059 -88.3 16.5 10.0 0.059 0.0
LEU B:312 B:971 9.0 0.053 -88.3 16.1 NA NA NA
4l6s 1 P09874 99.71 0.0 X-RAY
2013-08-07 LEU A:313 A:971 3.0 0.018 -94.1 16.5 3.0 0.018 0.0 HOH
3.268
N
O
LEU B:313 B:971 3.0 0.018 -89.1 16.7 NA NA NA
4und 1 P09874 99.71 0.0 X-RAY
2015-06-17 LEU A:333 A:971 1.0 0.006 -95.6 5.5 1.0 0.006 0.0
LEU B:333 B:971 1.0 0.006 -95.9 5.6 NA NA NA
5kpn 1 P09874 99.71 0.0 X-RAY
2016-12-21 LEU A:312 A:971 2.0 0.012 -99.7 15.4 2.0 0.012 0.0
LEU B:312 B:971 2.0 0.012 -96.7 15.8 NA NA NA
5kpo 1 P09874 99.71 0.0 X-RAY
2016-12-21 LEU A:312 A:971 3.0 0.018 -102.3 15.3 3.0 0.018 0.0
LEU B:312 B:971 3.0 0.018 -101.1 19.9 NA NA NA
5wrq 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 3.0 0.018 -100.9 14.2 3.0 0.018 0.0
LEU B:312 B:971 3.0 0.018 -103.1 19.9 NA NA NA
5wry 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 2.0 0.012 -99.1 13.7 2.0 0.012 0.0 HOH
3.167
N
O
LEU B:312 B:971 1.0 0.006 -100.4 28.8 NA NA NA
5wrz 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 4.0 0.024 -95.7 14.0 4.0 0.024 0.0
LEU B:312 B:971 2.0 0.012 -95.6 11.7 NA NA NA
5ws0 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 3.0 0.018 -99.3 13.6 3.0 0.018 0.0
LEU B:312 B:971 3.0 0.018 -94.2 18.3 NA NA NA
5ws1 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 4.0 0.024 -98.5 15.9 4.0 0.024 0.0
LEU B:312 B:971 2.0 0.012 -103.8 21.2 NA NA NA
5wtc 1 P09874 99.71 0.0 X-RAY
2017-01-25 LEU A:312 A:971 3.0 0.018 -97.9 14.6 3.0 0.018 0.0
LEU B:312 B:971 2.0 0.012 -95.6 12.7 NA NA NA
2rd6 1 P09874 99.71 0.0 X-RAY
2008-09-23 LEU A:310 A:310 9.0 0.053 -84.4 19.1 9.0 0.053 0.0 HOH
6.900
N
O
3gjw 1 P09874 99.71 0.0 X-RAY
2010-03-09 LEU A:310 A:310 11.0 0.065 -88.4 8.8 11.0 0.065 0.0 HOH
6.307
CD2
O
3gn7 1 P09874 99.71 0.0 X-RAY
2010-03-16 LEU A:310 A:310 8.0 0.047 -85.1 14.5 8.0 0.047 0.0 HOH
8.538
O
O
3l3l 1 P09874 99.71 0.0 X-RAY
2010-12-22 LEU A:310 A:310 9.0 0.053 -91.8 8.6 9.0 0.053 0.0
3l3m 1 P09874 99.71 0.0 X-RAY
2010-06-23 LEU A:310 A:310 4.0 0.024 -90.9 11.0 4.0 0.024 0.0 HOH
3.812
CD1
O
5kpp 1 P09874 99.71 0.0 X-RAY
2016-11-30 LEU A:310 A:971 3.0 0.018 -103.6 18.2 3.0 0.018 0.0 HOH
3.273
N
O
LEU B:310 B:971 2.0 0.012 -103.9 17.2 NA NA NA
5kpq 1 P09874 99.71 0.0 X-RAY
2016-12-14 LEU A:310 A:971 2.0 0.012 -102.8 18.5 2.0 0.012 0.0 HOH
3.357
N
O
LEU B:310 B:971 2.0 0.012 -107.2 17.6 NA NA NA
7cmw 1 P09874 99.71 0.0 X-RAY
2020-12-16 LEU A:314 A:971 4.0 0.024 -90.7 15.9 4.0 0.024 0.0
LEU B:314 B:971 9.0 0.053 -92.4 16.5 NA NA NA
5xst 1 P09874 99.43 0.0 X-RAY
2018-04-25 LEU A:311 A:310 4.0 0.024 -84.3 7.2 4.0 0.024 0.0
6i8m 1 P26446 86.7 0.0 X-RAY
2019-05-01 LEU A:320 A:971 8.0 0.047 -87.4 15.5 8.0 0.047 0.0 HOH
3.345
N
O
6i8t 1 P26446 86.7 0.0 X-RAY
2019-05-01 LEU A:320 A:971 21.0 0.124 -97.2 11.7 21.0 0.124 0.0 HOH
3.305
N
O
1a26 1 P26446 86.67 0.0 X-RAY
1998-05-27 LEU A:318 A:971 20.0 0.118 -81.2 11.7 20.0 0.118 0.0 HOH
3.574
N
O
1pax 1 P26446 86.67 0.0 X-RAY
1997-05-15 LEU A:318 A:971 15.0 0.088 -80.4 6.1 15.0 0.088 0.0 HOH
3.543
N
O
2paw 1 P26446 86.67 0.0 X-RAY
1998-05-27 LEU A:318 A:971 18.0 0.106 -76.5 10.0 18.0 0.106 0.0 HOH
3.773
N
O
2pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 LEU A:318 A:971 15.0 0.088 -81.3 8.6 15.0 0.088 0.0 HOH
3.583
N
O
3pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 LEU A:318 A:971 14.0 0.082 -80.8 11.0 14.0 0.082 0.0 HOH
3.517
N
O
4pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 LEU A:318 A:971 15.0 0.088 -82.9 12.6 15.0 0.088 0.0 HOH
3.578
N
O
1efy 1 P26446 86.86 0.0 X-RAY
2001-01-17 LEU A:310 A:971 18.0 0.106 -87.5 5.5 18.0 0.106 0.0 HOH
3.321
N
O
6m3i 2 P09874 100.0 3e-162 X-RAY
2021-03-03 LEU B:210 B:971 4.0 0.024 -98.6 13.5 4.0 0.024 0.0 HOH
3.434
N
O
5ds3 1 P09874 100.0 5e-160 X-RAY
2016-07-27 LEU A:230 A:971 10.0 0.059 -108.6 21.7 10.0 0.059 0.0 HOH
4.258
CD1
O
6bhv 1 P09874 100.0 5e-160 X-RAY
2018-02-28 LEU A:230 A:971 6.0 0.035 -102.4 13.9 6.0 0.035 0.0
LEU B:230 B:971 6.0 0.035 -102.0 14.8 NA NA NA
LEU C:230 C:971 9.0 0.053 -101.8 14.5 NA NA NA
LEU D:230 D:971 3.0 0.018 -100.8 14.5 NA NA NA
6nrf 1 P09874 100.0 5e-160 X-RAY
2019-08-14 LEU A:230 A:971 6.0 0.035 -94.7 14.0 6.0 0.035 0.0 HOH
3.459
N
O
6nrg 1 P09874 100.0 5e-160 X-RAY
2019-08-14 LEU A:230 A:971 9.0 0.053 -99.1 16.3 9.0 0.053 0.0 DMS
HOH
6.356
3.423
N
N
O
O
6nrh 1 P09874 100.0 5e-160 X-RAY
2019-08-14 LEU A:230 A:971 5.0 0.029 -95.8 11.6 5.0 0.029 0.0 HOH
3.434
N
O
6nri 1 P09874 100.0 5e-160 X-RAY
2019-08-14 LEU A:230 A:971 3.0 0.018 -101.8 10.9 3.0 0.018 0.0 HOH
3.399
N
O
6nrj 1 P09874 100.0 5e-160 X-RAY
2019-08-14 LEU A:230 A:971 6.0 0.035 -98.4 14.1 6.0 0.035 0.0 HOH
3.417
N
O
6ntu 1 P09874 100.0 5e-160 X-RAY
2020-02-05 LEU A:230 A:971 7.0 0.041 -99.7 16.7 7.0 0.041 0.0 HOH
3.374
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 LEU A:971 A:971 4.0 0.024 -92.6 11.5