Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226549767 . G A CCDS1554.1:NM_001618.3:c.2866Cct>Tct_NP_001609.2:p.956P>S Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4opx 2 P09874 100.0 0.0 X-RAY
2014-07-02 PRO B:439 C:956 3.0 0.021 E -64.8 138.3 3.0 0.021 0.0
PRO D:439 F:956 3.0 0.021 E -64.9 138.3 NA NA NA
4oqa 2 P09874 100.0 0.0 X-RAY
2014-07-02 PRO B:439 C:956 3.0 0.021 E -65.2 138.7 3.0 0.021 0.0
PRO D:439 F:956 3.0 0.021 E -65.2 138.8 NA NA NA
4oqb 2 P09874 100.0 0.0 X-RAY
2014-07-02 PRO B:439 C:956 3.0 0.021 E -65.0 138.6 3.0 0.021 0.0
PRO D:439 F:956 3.0 0.021 E -64.9 138.6 NA NA NA
4dqy 3 P09874 99.8 0.0 X-RAY
2012-05-30 PRO C:440 C:956 3.0 0.021 E -64.3 136.6 3.0 0.021 0.0
PRO F:440 F:956 2.0 0.014 E -63.7 137.1 NA NA NA
4zzz 1 P09874 100.0 0.0 X-RAY
2015-08-12 PRO A:304 A:956 8.0 0.055 E -57.0 137.7 8.0 0.055 0.0 SO4
HOH
6.690
3.571
O
CB
O3
O
PRO B:304 B:956 6.0 0.041 E -62.8 150.4 6.0 0.041 0.0 SO4
HOH
6.595
3.815
O
CB
O1
O
5a00 1 P09874 100.0 0.0 X-RAY
2015-08-12 PRO A:304 A:956 5.0 0.034 E -62.8 142.9 5.0 0.034 0.0 SO4
HOH
6.992
5.799
O
CD
O2
O
4xhu 1 P09874 99.44 0.0 X-RAY
2015-09-30 PRO A:301 C:956 5.0 0.034 E -56.9 134.6 5.0 0.034 0.0 HOH
3.899
CD
O
PRO C:301 A:956 2.0 0.014 E -52.0 142.4 NA NA NA
6xvw 1 P09874 100.0 0.0 X-RAY
2020-06-03 PRO A:296 A:956 3.0 0.021 E -60.6 137.9 3.0 0.021 0.0 HOH
3.114
O
O
PRO B:296 B:956 4.0 0.028 E -61.0 139.3 NA NA NA
7kk2 1 P09874 99.72 0.0 X-RAY
2021-01-06 PRO A:297 A:956 2.0 0.014 E -56.4 139.3 2.0 0.014 0.0 HOH
2.847
O
O
PRO B:297 B:956 6.0 0.041 E -66.9 146.3 NA NA NA
7kk3 1 P09874 99.72 0.0 X-RAY
2021-01-06 PRO A:297 A:956 3.0 0.021 E -64.4 131.9 3.0 0.021 0.0 HOH
3.851
CB
O
PRO B:297 B:956 8.0 0.055 E -61.5 138.4 NA NA NA
PRO C:297 C:956 3.0 0.021 E -62.2 136.6 NA NA NA
PRO D:297 D:956 3.0 0.021 E -66.4 139.8 NA NA NA
7kk4 1 P09874 99.72 0.0 X-RAY
2021-01-06 PRO A:297 A:956 6.0 0.041 E -72.1 116.9 6.0 0.041 0.0 HOH
5.913
CD
O
PRO B:297 B:956 4.0 0.028 E -72.3 128.0 NA NA NA
7kk5 1 P09874 99.72 0.0 X-RAY
2021-01-06 PRO A:297 A:956 4.0 0.028 E -60.9 135.5 4.0 0.028 0.0 HOH
3.659
CB
O
PRO B:297 B:956 6.0 0.041 E -58.4 139.0 NA NA NA
PRO C:297 C:956 2.0 0.014 E -58.7 141.1 NA NA NA
PRO D:297 D:956 3.0 0.021 E -56.7 139.1 NA NA NA
7kk6 1 P09874 99.72 0.0 X-RAY
2021-01-06 PRO A:297 A:956 3.0 0.021 E -64.7 142.0 3.0 0.021 0.0 HOH
3.914
CB
O
PRO B:297 B:956 10.0 0.069 E -70.8 146.2 NA NA NA
7aaa 1 P09874 99.43 0.0 X-RAY
2021-01-13 PRO A:297 A:956 1.0 0.007 E -59.2 141.9 1.0 0.007 0.0 HOH
2.872
O
O
PRO B:297 B:956 5.0 0.034 E -67.3 137.4 NA NA NA
7aab 1 P09874 99.43 0.0 X-RAY
2021-01-13 PRO A:297 A:956 3.0 0.021 E -65.7 137.0 3.0 0.021 0.0 SO4
HOH
7.300
3.399
O
O
O1
O
PRO B:297 B:956 3.0 0.021 E -65.8 136.9 NA NA NA
7aac 1 P09874 99.43 0.0 X-RAY
2021-01-13 PRO A:297 A:956 4.0 0.028 E -61.4 135.9 4.0 0.028 0.0 HOH
3.635
CB
O
PRO B:297 B:956 4.0 0.028 E -61.8 136.8 NA NA NA
7aad 1 P09874 99.43 0.0 X-RAY
2021-01-13 PRO A:297 A:956 4.0 0.028 E -64.9 143.2 4.0 0.028 0.0 HOH
3.676
CB
O
PRO B:297 B:956 3.0 0.021 E -65.3 143.2 NA NA NA
7onr 1 P09874 99.43 0.0 X-RAY
2021-09-15 PRO A:297 A:956 3.0 0.021 E -61.0 142.4 3.0 0.021 0.0 HOH
3.159
O
O
PRO B:297 B:956 7.0 0.048 E -63.9 152.8 NA NA NA
7ons 1 P09874 99.43 0.0 X-RAY
2021-09-15 PRO A:297 A:956 3.0 0.021 E -61.7 143.6 3.0 0.021 0.0 SO4
HOH
6.956
3.399
O
O
O1
O
PRO B:297 B:956 3.0 0.021 E -62.1 142.8 NA NA NA
7ont 1 P09874 99.43 0.0 X-RAY
2021-09-15 PRO A:297 A:956 2.0 0.014 E -58.7 136.0 2.0 0.014 0.0 HOH
3.383
CA
O
PRO B:297 B:956 3.0 0.021 E -59.3 135.9 NA NA NA
5ha9 1 P09874 100.0 0.0 X-RAY
2016-03-09 PRO A:296 A:295 5.0 0.034 E -58.1 135.9 5.0 0.034 0.0
PRO B:296 B:295 6.0 0.041 E -61.5 126.2 6.0 0.041 0.0 SO4
7.451
O
O3
4hhy 1 P09874 99.43 0.0 X-RAY
2013-03-27 PRO A:300 A:295 4.0 0.028 E -65.8 140.9 NA NA NA
PRO B:300 B:295 4.0 0.028 E -62.4 130.7 NA NA NA
PRO C:300 C:295 6.0 0.041 E -63.2 137.8 6.0 0.041 0.0 HOH
7.682
O
O
PRO D:300 D:295 5.0 0.034 E -74.6 127.9 NA NA NA
4hhz 1 P09874 99.43 0.0 X-RAY
2013-03-27 PRO A:300 A:295 2.0 0.014 E -55.5 149.6 NA NA NA
PRO B:300 B:295 4.0 0.028 E -59.8 149.7 NA NA NA
PRO C:300 C:295 3.0 0.021 E -71.1 156.4 3.0 0.021 0.0 HOH
7.523
O
O
PRO D:300 D:295 3.0 0.021 E -66.1 139.9 NA NA NA
5xsr 1 P09874 99.43 0.0 X-RAY
2018-04-25 PRO A:300 A:295 5.0 0.034 E -64.9 140.2 5.0 0.034 0.0 HOH
3.538
CB
O
5xsu 1 P09874 99.43 0.0 X-RAY
2018-04-25 PRO A:300 A:295 7.0 0.048 E -59.8 142.3 7.0 0.048 0.0 SO4
HOH
6.735
3.887
O
CD
O1
O
PRO B:300 B:295 6.0 0.041 E -60.1 140.5 NA NA NA
PRO C:300 C:295 5.0 0.034 E -59.3 141.8 NA NA NA
PRO D:300 D:295 4.0 0.028 E -61.0 141.7 NA NA NA
1uk0 1 P09874 100.0 0.0 X-RAY
2004-01-27 PRO A:295 A:295 2.0 0.014 E -32.0 107.8 2.0 0.014 0.0 HOH
3.222
O
O
PRO B:295 B:295 5.0 0.034 E -25.7 119.6 NA NA NA
1uk1 1 P09874 100.0 0.0 X-RAY
2004-09-14 PRO A:295 A:956 7.0 0.048 E -55.7 140.4 7.0 0.048 0.0 HOH
3.658
O
O
PRO B:295 B:956 8.0 0.055 -58.4 144.3 NA NA NA
1wok 1 P09874 100.0 0.0 X-RAY
2005-03-15 PRO A:295 A:956 10.0 0.069 E -49.8 126.6 10.0 0.069 0.0
PRO B:295 B:956 11.0 0.076 E -74.1 135.1 11.0 0.076 0.0
PRO C:295 C:956 7.0 0.048 E -61.4 146.8 7.0 0.048 0.0
PRO D:295 D:956 6.0 0.041 -51.8 114.4 6.0 0.041 0.0
2rcw 1 P09874 100.0 0.0 X-RAY
2008-09-23 PRO A:295 A:295 2.0 0.014 E -58.6 134.0 2.0 0.014 0.0 HOH
5.857
O
O
6vkk 1 P09874 99.72 0.0 X-RAY
2020-06-17 PRO A:317 A:956 4.0 0.028 E -53.7 134.1 4.0 0.028 0.0 SO4
HOH
7.229
3.837
O
CD
O3
O
PRO B:317 D:956 3.0 0.021 E -53.0 133.9 NA NA NA
PRO C:317 C:956 6.0 0.041 E -52.9 134.4 NA NA NA
PRO D:317 B:956 2.0 0.014 E -52.7 134.4 NA NA NA
6vko 1 P09874 99.72 0.0 X-RAY
2020-06-17 PRO A:317 A:956 2.0 0.014 E -60.4 140.8 2.0 0.014 0.0 SO4
HOH
7.655
9.720
O
O
O4
O
PRO B:317 B:956 2.0 0.014 E -60.6 141.3 NA NA NA
PRO C:317 C:956 3.0 0.021 E -60.7 140.7 NA NA NA
PRO D:317 D:956 2.0 0.014 E -60.6 141.0 NA NA NA
6vkq 1 P09874 99.72 0.0 X-RAY
2020-06-17 PRO A:317 A:956 1.0 0.007 E -65.4 132.1 1.0 0.007 0.0 SO4
6.590
O
O2
PRO B:317 B:956 3.0 0.021 E -65.4 131.9 NA NA NA
PRO C:317 C:956 2.0 0.014 E -65.5 132.0 NA NA NA
PRO D:317 D:956 2.0 0.014 E -65.2 132.0 NA NA NA
4gv7 1 P09874 99.43 0.0 X-RAY
2013-06-19 PRO A:296 A:956 2.0 0.014 E -71.3 141.0 2.0 0.014 0.0
PRO B:296 B:956 3.0 0.021 E -70.7 130.5 NA NA NA
PRO C:296 C:956 3.0 0.021 E -57.4 146.0 NA NA NA
PRO D:296 D:956 3.0 0.021 E -60.3 131.0 NA NA NA
4r5w 1 P09874 99.43 0.0 X-RAY
2015-09-02 PRO A:296 A:956 4.0 0.028 E -64.0 138.1 4.0 0.028 0.0
PRO B:296 B:956 5.0 0.034 E -63.1 138.1 NA NA NA
4r6e 1 P09874 99.43 0.0 X-RAY
2015-09-09 PRO A:296 A:956 2.0 0.014 E -62.4 135.6 2.0 0.014 0.0 HOH
4.090
CD
O
PRO B:296 B:956 3.0 0.021 E -63.2 135.4 NA NA NA
PRO C:296 C:956 3.0 0.021 E -62.5 135.1 NA NA NA
PRO D:296 D:956 3.0 0.021 E -62.6 135.7 NA NA NA
6ghk 1 P09874 99.43 0.0 X-RAY
2019-05-22 PRO A:296 A:956 4.0 0.028 E -63.1 139.1 4.0 0.028 0.0 HOH
2.426
O
O
PRO B:296 B:956 4.0 0.028 E -61.1 137.0 NA NA NA
4pjt 1 P09874 100.0 0.0 X-RAY
2014-09-24 PRO A:315 A:956 4.0 0.028 E -63.2 138.7 4.0 0.028 0.0 SO4
HOH
6.405
3.833
O
O
O1
O
PRO B:315 B:956 5.0 0.034 E -60.2 138.6 NA NA NA
PRO C:315 C:956 5.0 0.034 E -60.1 138.4 NA NA NA
PRO D:315 D:956 3.0 0.021 E -60.8 139.9 NA NA NA
4rv6 1 P09874 99.71 0.0 X-RAY
2015-12-09 PRO A:297 A:956 4.0 0.028 E -73.0 134.3 4.0 0.028 0.0
PRO B:297 B:956 5.0 0.034 E -72.5 133.7 NA NA NA
PRO C:297 C:956 5.0 0.034 E -73.0 134.6 NA NA NA
PRO D:297 D:956 4.0 0.028 E -72.7 134.7 NA NA NA
4uxb 1 P09874 99.71 0.0 X-RAY
2015-09-02 PRO A:297 A:956 4.0 0.028 E -64.0 134.3 4.0 0.028 0.0 HOH
7.916
O
O
PRO B:297 B:956 3.0 0.021 E -64.2 134.3 NA NA NA
4l6s 1 P09874 99.71 0.0 X-RAY
2013-08-07 PRO A:298 A:956 1.0 0.007 E -50.8 134.3 1.0 0.007 0.0 HOH
3.049
O
O
PRO B:298 B:956 2.0 0.014 E -57.4 135.5 NA NA NA
4und 1 P09874 99.71 0.0 X-RAY
2015-06-17 PRO A:318 A:956 4.0 0.028 E -63.2 135.5 4.0 0.028 0.0 HOH
6.013
CD
O
PRO B:318 B:956 4.0 0.028 E -62.5 135.9 NA NA NA
5kpn 1 P09874 99.71 0.0 X-RAY
2016-12-21 PRO A:297 A:956 2.0 0.014 E -52.0 134.7 2.0 0.014 0.0
PRO B:297 B:956 4.0 0.028 E -63.7 127.9 NA NA NA
5kpo 1 P09874 99.71 0.0 X-RAY
2016-12-21 PRO A:297 A:956 4.0 0.028 E -60.0 142.6 4.0 0.028 0.0
PRO B:297 B:956 4.0 0.028 E -60.0 142.2 NA NA NA
5wrq 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 4.0 0.028 E -61.9 141.8 4.0 0.028 0.0
PRO B:297 B:956 4.0 0.028 E -62.2 142.8 NA NA NA
5wry 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 3.0 0.021 E -61.8 145.9 3.0 0.021 0.0 HOH
3.851
CB
O
PRO B:297 B:956 9.0 0.062 E -68.1 138.8 NA NA NA
5wrz 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 2.0 0.014 E -56.0 135.3 2.0 0.014 0.0
PRO B:297 B:956 5.0 0.034 E -66.2 121.1 NA NA NA
5ws0 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 3.0 0.021 E -60.5 143.1 3.0 0.021 0.0
PRO B:297 B:956 3.0 0.021 E -53.7 117.5 NA NA NA
5ws1 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 2.0 0.014 E -54.3 139.4 2.0 0.014 0.0
PRO B:297 B:956 4.0 0.028 E -56.0 130.5 NA NA NA
5wtc 1 P09874 99.71 0.0 X-RAY
2017-01-25 PRO A:297 A:956 2.0 0.014 E -47.7 137.8 2.0 0.014 0.0
PRO B:297 B:956 4.0 0.028 E -66.8 115.7 NA NA NA
2rd6 1 P09874 99.71 0.0 X-RAY
2008-09-23 PRO A:295 A:295 4.0 0.028 E -63.8 139.9 4.0 0.028 0.0 HOH
4.130
CD
O
3gjw 1 P09874 99.71 0.0 X-RAY
2010-03-09 PRO A:295 A:295 3.0 0.021 E -66.6 147.2 3.0 0.021 0.0 HOH
4.392
CD
O
3gn7 1 P09874 99.71 0.0 X-RAY
2010-03-16 PRO A:295 A:295 3.0 0.021 -74.2 144.4 3.0 0.021 0.0 HOH
4.616
CD
O
3l3l 1 P09874 99.71 0.0 X-RAY
2010-12-22 PRO A:295 A:295 3.0 0.021 E -78.0 143.7 3.0 0.021 0.0 HOH
6.094
CD
O
3l3m 1 P09874 99.71 0.0 X-RAY
2010-06-23 PRO A:295 A:295 5.0 0.034 E -76.3 141.5 5.0 0.034 0.0 HOH
4.126
CD
O
5kpp 1 P09874 99.71 0.0 X-RAY
2016-11-30 PRO A:295 A:956 3.0 0.021 E -59.5 141.9 3.0 0.021 0.0 HOH
3.482
CB
O
PRO B:295 B:956 5.0 0.034 E -61.1 144.8 NA NA NA
5kpq 1 P09874 99.71 0.0 X-RAY
2016-12-14 PRO A:295 A:956 4.0 0.028 E -67.3 143.7 4.0 0.028 0.0 HOH
3.528
CB
O
PRO B:295 B:956 5.0 0.034 E -64.9 136.4 NA NA NA
7cmw 1 P09874 99.71 0.0 X-RAY
2020-12-16 PRO A:299 A:956 4.0 0.028 E -62.3 138.0 4.0 0.028 0.0 HOH
6.054
CD
O
PRO B:299 B:956 3.0 0.021 E -65.0 138.1 NA NA NA
5xst 1 P09874 99.43 0.0 X-RAY
2018-04-25 PRO A:296 A:295 5.0 0.034 E -65.0 136.7 5.0 0.034 0.0 HOH
6.224
CD
O
6i8m 1 P26446 86.7 0.0 X-RAY
2019-05-01 PRO A:305 A:956 10.0 0.069 E -45.1 154.2 10.0 0.069 0.0 HOH
3.921
CB
O
6i8t 1 P26446 86.7 0.0 X-RAY
2019-05-01 PRO A:305 A:956 9.0 0.062 E -50.5 139.8 9.0 0.062 0.0 HOH
3.718
CB
O
1a26 1 P26446 86.67 0.0 X-RAY
1998-05-27 PRO A:303 A:956 13.0 0.09 E -62.3 151.7 13.0 0.09 0.0 HOH
3.412
CD
O
1pax 1 P26446 86.67 0.0 X-RAY
1997-05-15 PRO A:303 A:956 8.0 0.055 E -63.2 143.1 8.0 0.055 0.0 HOH
3.781
CB
O
2paw 1 P26446 86.67 0.0 X-RAY
1998-05-27 PRO A:303 A:956 12.0 0.083 E -69.5 147.8 12.0 0.083 0.0 HOH
3.617
CB
O
2pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 PRO A:303 A:956 11.0 0.076 E -62.9 148.5 11.0 0.076 0.0 HOH
3.727
CB
O
3pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 PRO A:303 A:956 10.0 0.069 E -62.2 147.5 10.0 0.069 0.0 HOH
3.689
CB
O
4pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 PRO A:303 A:956 11.0 0.076 E -59.0 152.0 11.0 0.076 0.0 HOH
3.902
CB
O
1efy 1 P26446 86.86 0.0 X-RAY
2001-01-17 PRO A:295 A:956 10.0 0.069 E -53.2 149.3 10.0 0.069 0.0 HOH
3.642
CB
O
6m3i 2 P09874 100.0 3e-162 X-RAY
2021-03-03 PRO B:195 B:956 2.0 0.014 E -54.9 133.9 2.0 0.014 0.0 HOH
2.966
O
O
5ds3 1 P09874 100.0 5e-160 X-RAY
2016-07-27 PRO A:215 A:956 4.0 0.028 E -65.2 149.5 4.0 0.028 0.0 SO4
HOH
7.235
4.263
CD
CD
O4
O
6bhv 1 P09874 100.0 5e-160 X-RAY
2018-02-28 PRO A:215 A:956 3.0 0.021 E -54.8 135.9 3.0 0.021 0.0 HOH
3.794
CD
O
PRO B:215 B:956 2.0 0.014 E -55.1 136.1 NA NA NA
PRO C:215 C:956 3.0 0.021 E -54.8 135.7 NA NA NA
PRO D:215 D:956 3.0 0.021 E -54.7 136.0 NA NA NA
6nrf 1 P09874 100.0 5e-160 X-RAY
2019-08-14 PRO A:215 A:956 3.0 0.021 E -49.7 133.0 3.0 0.021 0.0 HOH
3.519
CB
O
6nrg 1 P09874 100.0 5e-160 X-RAY
2019-08-14 PRO A:215 A:956 3.0 0.021 E -55.6 139.3 3.0 0.021 0.0 SO4
DMS
DMS
HOH
6.770
3.550
5.415
3.589
O
O
O
CB
O4
O
C1
O
6nrh 1 P09874 100.0 5e-160 X-RAY
2019-08-14 PRO A:215 A:956 3.0 0.021 E -51.6 136.1 3.0 0.021 0.0 SO4
HOH
6.875
2.975
O
O
O4
O
6nri 1 P09874 100.0 5e-160 X-RAY
2019-08-14 PRO A:215 A:956 1.0 0.007 E -52.4 143.1 1.0 0.007 0.0 HOH
3.602
CB
O
6nrj 1 P09874 100.0 5e-160 X-RAY
2019-08-14 PRO A:215 A:956 3.0 0.021 E -55.8 141.1 3.0 0.021 0.0 SO4
HOH
6.846
3.077
O
O
O4
O
6ntu 1 P09874 100.0 5e-160 X-RAY
2020-02-05 PRO A:215 A:956 3.0 0.021 E -53.1 134.5 3.0 0.021 0.0 SO4
HOH
7.232
3.634
O
CB
O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 PRO A:956 A:956 3.0 0.021 E -55.2 139.8