Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226553753 . C A CCDS1554.1:NM_001618.3:c.2407Gtg>Ttg_NP_001609.2:p.803V>L Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4opx 2 P09874 100.0 0.0 X-RAY
2014-07-02 VAL B:286 C:803 57.0 0.368 E -95.9 113.6 57.0 0.368 0.0
VAL D:286 F:803 58.0 0.374 E -95.8 113.6 NA NA NA
4oqa 2 P09874 100.0 0.0 X-RAY
2014-07-02 VAL B:286 C:803 58.0 0.374 E -93.4 113.5 58.0 0.374 0.0
VAL D:286 F:803 58.0 0.374 E -93.5 113.5 NA NA NA
4oqb 2 P09874 100.0 0.0 X-RAY
2014-07-02 VAL B:286 C:803 58.0 0.374 E -96.4 114.1 58.0 0.374 0.0
VAL D:286 F:803 58.0 0.374 E -96.3 114.1 NA NA NA
4dqy 3 P09874 99.8 0.0 X-RAY
2012-05-30 VAL C:287 C:803 58.0 0.374 E -99.1 110.2 58.0 0.374 0.0
VAL F:287 F:803 56.0 0.361 E -100.1 108.7 NA NA NA
4zzz 1 P09874 100.0 0.0 X-RAY
2015-08-12 VAL A:151 A:803 41.0 0.265 E -79.9 122.8 41.0 0.265 0.0 HOH
2.918
N
O
VAL B:151 B:803 58.0 0.374 E -83.3 146.9 58.0 0.374 0.0 HOH
6.568
CG2
O
5a00 1 P09874 100.0 0.0 X-RAY
2015-08-12 VAL A:151 A:803 64.0 0.413 E -81.9 129.6 64.0 0.413 0.0 HOH
3.120
N
O
4xhu 1 P09874 99.44 0.0 X-RAY
2015-09-30 VAL A:148 C:803 62.0 0.4 E -78.2 129.1 62.0 0.4 0.0 HOH
2.964
N
O
VAL C:148 A:803 63.0 0.406 E -74.8 126.8 NA NA NA
6xvw 1 P09874 100.0 0.0 X-RAY
2020-06-03 VAL A:143 A:803 58.0 0.374 E -77.5 127.6 58.0 0.374 0.0 EDO
EDO
HOH
7.152
9.211
2.697
CG1
CG2
O
C2
O2
O
VAL B:143 B:803 61.0 0.394 E -81.2 128.3 NA NA NA
7kk2 1 P09874 99.72 0.0 X-RAY
2021-01-06 VAL A:144 A:803 64.0 0.413 E -84.0 129.7 64.0 0.413 0.0 HOH
2.930
N
O
VAL B:144 B:803 55.0 0.355 E -89.1 126.4 NA NA NA
7kk3 1 P09874 99.72 0.0 X-RAY
2021-01-06 VAL A:144 A:803 51.0 0.329 E -81.5 135.6 51.0 0.329 0.0 HOH
2.934
N
O
VAL B:144 B:803 58.0 0.374 E -86.6 132.4 NA NA NA
VAL C:144 C:803 56.0 0.361 E -89.4 127.9 NA NA NA
VAL D:144 D:803 49.0 0.316 E -72.8 138.5 NA NA NA
7kk4 1 P09874 99.72 0.0 X-RAY
2021-01-06 VAL A:144 A:803 61.0 0.394 E -80.0 135.5 61.0 0.394 0.0 HOH
2.999
N
O
VAL B:144 B:803 67.0 0.432 E -83.6 130.4 NA NA NA
7kk5 1 P09874 99.72 0.0 X-RAY
2021-01-06 VAL A:144 A:803 51.0 0.329 E -82.8 129.7 51.0 0.329 0.0 HOH
2.817
N
O
VAL B:144 B:803 59.0 0.381 E -81.3 131.1 NA NA NA
VAL C:144 C:803 55.0 0.355 E -87.6 128.5 NA NA NA
VAL D:144 D:803 49.0 0.316 E -78.7 133.6 NA NA NA
7kk6 1 P09874 99.72 0.0 X-RAY
2021-01-06 VAL A:144 A:803 59.0 0.381 E -81.8 127.4 59.0 0.381 0.0 HOH
2.818
N
O
VAL B:144 B:803 58.0 0.374 E -78.1 119.5 NA NA NA
7aaa 1 P09874 99.43 0.0 X-RAY
2021-01-13 VAL A:144 A:803 59.0 0.381 E -83.1 128.5 59.0 0.381 0.0 HOH
2.901
N
O
VAL B:144 B:803 61.0 0.394 E -82.8 128.2 NA NA NA
7aab 1 P09874 99.43 0.0 X-RAY
2021-01-13 VAL A:144 A:803 57.0 0.368 E -81.5 123.7 57.0 0.368 0.0 HOH
9.139
O
O
VAL B:144 B:803 49.0 0.316 E -81.7 124.0 NA NA NA
7aac 1 P09874 99.43 0.0 X-RAY
2021-01-13 VAL A:144 A:803 61.0 0.394 E -84.9 127.1 61.0 0.394 0.0 HOH
2.804
N
O
VAL B:144 B:803 60.0 0.387 E -83.2 126.9 NA NA NA
7aad 1 P09874 99.43 0.0 X-RAY
2021-01-13 VAL A:144 A:803 58.0 0.374 E -83.8 125.1 58.0 0.374 0.0 HOH
2.879
N
O
VAL B:144 B:803 61.0 0.394 E -84.4 125.0 NA NA NA
7onr 1 P09874 99.43 0.0 X-RAY
2021-09-15 VAL A:144 A:803 63.0 0.406 E -82.6 129.1 63.0 0.406 0.0 HOH
3.029
N
O
VAL B:144 B:803 62.0 0.4 E -83.3 129.1 NA NA NA
7ons 1 P09874 99.43 0.0 X-RAY
2021-09-15 VAL A:144 A:803 60.0 0.387 E -83.7 125.2 60.0 0.387 0.0 HOH
2.833
N
O
VAL B:144 B:803 59.0 0.381 E -85.1 125.2 NA NA NA
7ont 1 P09874 99.43 0.0 X-RAY
2021-09-15 VAL A:144 A:803 60.0 0.387 E -86.0 126.7 60.0 0.387 0.0 HOH
2.889
N
O
VAL B:144 B:803 59.0 0.381 E -86.0 126.2 NA NA NA
5ha9 1 P09874 100.0 0.0 X-RAY
2016-03-09 VAL A:143 A:142 60.0 0.387 E -76.1 129.0 60.0 0.387 0.0
VAL B:143 B:142 63.0 0.406 E -80.6 121.7 63.0 0.406 0.0
4hhy 1 P09874 99.43 0.0 X-RAY
2013-03-27 VAL A:147 A:142 54.0 0.348 E -80.0 141.1 NA NA NA
VAL B:147 B:142 52.0 0.335 E -78.0 136.9 NA NA NA
VAL C:147 C:142 59.0 0.381 E -93.4 128.8 59.0 0.381 0.0
VAL D:147 D:142 44.0 0.284 E -81.6 118.2 NA NA NA
4hhz 1 P09874 99.43 0.0 X-RAY
2013-03-27 VAL A:147 A:142 51.0 0.329 E -85.1 134.1 NA NA NA
VAL B:147 B:142 49.0 0.316 E -91.9 134.7 NA NA NA
VAL C:147 C:142 52.0 0.335 E -81.1 137.1 52.0 0.335 0.0 HOH
4.255
CG1
O
VAL D:147 D:142 52.0 0.335 E -66.5 132.6 NA NA NA
5xsr 1 P09874 99.43 0.0 X-RAY
2018-04-25 VAL A:147 A:142 60.0 0.387 E -85.9 127.8 60.0 0.387 0.0 HOH
3.046
N
O
5xsu 1 P09874 99.43 0.0 X-RAY
2018-04-25 VAL A:147 A:142 55.0 0.355 E -84.7 136.9 55.0 0.355 0.0
VAL B:147 B:142 54.0 0.348 E -83.2 135.7 NA NA NA
VAL C:147 C:142 59.0 0.381 E -83.3 136.9 NA NA NA
VAL D:147 D:142 63.0 0.406 E -81.6 139.7 NA NA NA
1uk0 1 P09874 100.0 0.0 X-RAY
2004-01-27 VAL A:142 A:142 34.0 0.219 E -102.8 114.3 34.0 0.219 0.0 HOH
3.053
O
O
VAL B:142 B:142 39.0 0.252 -85.4 90.6 NA NA NA
1uk1 1 P09874 100.0 0.0 X-RAY
2004-09-14 VAL A:142 A:803 20.0 0.129 E -69.3 109.6 20.0 0.129 0.0 HOH
5.227
CG1
O
VAL B:142 B:803 43.0 0.277 E -104.9 128.2 NA NA NA
1wok 1 P09874 100.0 0.0 X-RAY
2005-03-15 VAL A:142 A:803 61.0 0.394 E -77.3 136.7 61.0 0.394 0.0
VAL B:142 B:803 55.0 0.355 E -39.3 153.4 55.0 0.355 0.0
VAL C:142 C:803 58.0 0.374 E -79.1 148.0 58.0 0.374 0.0
VAL D:142 D:803 78.0 0.503 -99.9 146.9 78.0 0.503 0.0
2rcw 1 P09874 100.0 0.0 X-RAY
2008-09-23 VAL A:142 A:142 55.0 0.355 B -92.7 134.2 55.0 0.355 0.0 HOH
2.810
N
O
6vkk 1 P09874 99.72 0.0 X-RAY
2020-06-17 VAL A:164 A:803 52.0 0.335 E -76.6 129.6 52.0 0.335 0.0 HOH
4.000
CG1
O
VAL B:164 D:803 58.0 0.374 E -76.3 129.5 NA NA NA
VAL C:164 C:803 62.0 0.4 E -76.4 129.0 NA NA NA
VAL D:164 B:803 59.0 0.381 E -76.8 129.6 NA NA NA
6vko 1 P09874 99.72 0.0 X-RAY
2020-06-17 VAL A:164 A:803 43.0 0.277 E -84.8 121.2 43.0 0.277 0.0
VAL B:164 B:803 45.0 0.29 E -84.2 121.0 NA NA NA
VAL C:164 C:803 42.0 0.271 E -84.6 120.8 NA NA NA
VAL D:164 D:803 46.0 0.297 E -83.8 120.9 NA NA NA
6vkq 1 P09874 99.72 0.0 X-RAY
2020-06-17 VAL A:164 A:803 39.0 0.252 E -91.4 114.2 39.0 0.252 0.0
VAL B:164 B:803 38.0 0.245 E -91.7 114.2 NA NA NA
VAL C:164 C:803 41.0 0.265 E -91.4 114.1 NA NA NA
VAL D:164 D:803 40.0 0.258 E -91.1 114.1 NA NA NA
4gv7 1 P09874 99.43 0.0 X-RAY
2013-06-19 VAL A:143 A:803 62.0 0.4 E -68.6 133.6 62.0 0.4 0.0
VAL B:143 B:803 51.0 0.329 E -82.6 118.5 NA NA NA
VAL C:143 C:803 66.0 0.426 E -84.7 123.5 NA NA NA
VAL D:143 D:803 62.0 0.4 E -95.7 123.7 NA NA NA
4r5w 1 P09874 99.43 0.0 X-RAY
2015-09-02 VAL A:143 A:803 50.0 0.323 E -89.7 129.0 50.0 0.323 0.0 HOH
2.976
N
O
VAL B:143 B:803 43.0 0.277 E -89.3 128.9 NA NA NA
4r6e 1 P09874 99.43 0.0 X-RAY
2015-09-09 VAL A:143 A:803 57.0 0.368 E -84.1 127.9 57.0 0.368 0.0 HOH
6.870
N
O
VAL B:143 B:803 60.0 0.387 E -83.3 129.2 NA NA NA
VAL C:143 C:803 56.0 0.361 E -83.7 128.5 NA NA NA
VAL D:143 D:803 55.0 0.355 E -83.6 129.4 NA NA NA
6ghk 1 P09874 99.43 0.0 X-RAY
2019-05-22 VAL A:143 A:803 60.0 0.387 E -85.2 128.3 60.0 0.387 0.0 HOH
2.802
O
O
VAL B:143 B:803 49.0 0.316 E -82.4 129.8 NA NA NA
4pjt 1 P09874 100.0 0.0 X-RAY
2014-09-24 VAL A:162 A:803 56.0 0.361 E -77.9 132.3 56.0 0.361 0.0 SO4
HOH
9.708
2.945
O
N
O3
O
VAL B:162 B:803 57.0 0.368 E -79.1 131.4 NA NA NA
VAL C:162 C:803 56.0 0.361 E -79.0 133.4 NA NA NA
VAL D:162 D:803 55.0 0.355 E -78.2 133.6 NA NA NA
4rv6 1 P09874 99.71 0.0 X-RAY
2015-12-09 VAL A:144 A:803 59.0 0.381 E -93.8 125.6 59.0 0.381 0.0
VAL B:144 B:803 59.0 0.381 E -92.9 126.1 NA NA NA
VAL C:144 C:803 53.0 0.342 E -93.4 124.5 NA NA NA
VAL D:144 D:803 50.0 0.323 E -93.4 124.4 NA NA NA
4uxb 1 P09874 99.71 0.0 X-RAY
2015-09-02 VAL A:144 A:803 51.0 0.329 E -77.0 135.3 51.0 0.329 0.0
VAL B:144 B:803 53.0 0.342 E -76.9 135.5 NA NA NA
4l6s 1 P09874 99.71 0.0 X-RAY
2013-08-07 VAL A:145 A:803 62.0 0.4 E -81.0 125.4 62.0 0.4 0.0 HOH
3.120
N
O
VAL B:145 B:803 60.0 0.387 E -83.2 126.3 NA NA NA
4und 1 P09874 99.71 0.0 X-RAY
2015-06-17 VAL A:165 A:803 63.0 0.406 E -74.2 132.6 63.0 0.406 0.0
VAL B:165 B:803 58.0 0.374 E -76.9 133.8 NA NA NA
5kpn 1 P09874 99.71 0.0 X-RAY
2016-12-21 VAL A:144 A:803 60.0 0.387 E -87.5 125.4 60.0 0.387 0.0
VAL B:144 B:803 55.0 0.355 E -83.0 124.6 NA NA NA
5kpo 1 P09874 99.71 0.0 X-RAY
2016-12-21 VAL A:144 A:803 62.0 0.4 E -82.1 129.0 62.0 0.4 0.0
VAL B:144 B:803 53.0 0.342 E -88.6 125.2 NA NA NA
5wrq 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 61.0 0.394 E -80.5 127.2 61.0 0.394 0.0
VAL B:144 B:803 52.0 0.335 E -85.0 127.4 NA NA NA
5wry 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 60.0 0.387 E -76.6 128.7 60.0 0.387 0.0 HOH
2.816
N
O
VAL B:144 B:803 59.0 0.381 E -77.2 124.0 NA NA NA
5wrz 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 61.0 0.394 E -81.7 126.5 61.0 0.394 0.0
VAL B:144 B:803 53.0 0.342 E -81.0 126.2 NA NA NA
5ws0 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 63.0 0.406 E -85.9 131.4 63.0 0.406 0.0
VAL B:144 B:803 58.0 0.374 E -80.7 127.0 NA NA NA
5ws1 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 60.0 0.387 E -82.8 130.9 60.0 0.387 0.0
VAL B:144 B:803 58.0 0.374 E -83.8 127.7 NA NA NA
5wtc 1 P09874 99.71 0.0 X-RAY
2017-01-25 VAL A:144 A:803 62.0 0.4 E -85.7 127.5 62.0 0.4 0.0
VAL B:144 B:803 53.0 0.342 E -84.4 130.6 NA NA NA
2rd6 1 P09874 99.71 0.0 X-RAY
2008-09-23 VAL A:142 A:142 50.0 0.323 E -86.2 136.0 50.0 0.323 0.0 HOH
3.136
N
O
3gjw 1 P09874 99.71 0.0 X-RAY
2010-03-09 VAL A:142 A:142 53.0 0.342 E -87.1 140.0 53.0 0.342 0.0 HOH
3.431
CG1
O
3gn7 1 P09874 99.71 0.0 X-RAY
2010-03-16 VAL A:142 A:142 54.0 0.348 E -79.9 144.6 54.0 0.348 0.0 HOH
2.936
N
O
3l3l 1 P09874 99.71 0.0 X-RAY
2010-12-22 VAL A:142 A:142 49.0 0.316 E -80.9 137.2 49.0 0.316 0.0 HOH
2.788
N
O
3l3m 1 P09874 99.71 0.0 X-RAY
2010-06-23 VAL A:142 A:142 47.0 0.303 E -80.7 140.7 47.0 0.303 0.0 HOH
2.806
N
O
5kpp 1 P09874 99.71 0.0 X-RAY
2016-11-30 VAL A:142 A:803 62.0 0.4 E -81.8 128.8 62.0 0.4 0.0 HOH
3.026
O
O
VAL B:142 B:803 57.0 0.368 E -84.8 125.4 NA NA NA
5kpq 1 P09874 99.71 0.0 X-RAY
2016-12-14 VAL A:142 A:803 63.0 0.406 E -73.1 122.5 63.0 0.406 0.0 HOH
4.911
CG1
O
VAL B:142 B:803 55.0 0.355 E -81.2 127.4 NA NA NA
7cmw 1 P09874 99.71 0.0 X-RAY
2020-12-16 VAL A:146 A:803 64.0 0.413 E -79.6 131.9 64.0 0.413 0.0 HOH
4.062
CG1
O
VAL B:146 B:803 48.0 0.31 E -79.5 132.1 NA NA NA
5xst 1 P09874 99.43 0.0 X-RAY
2018-04-25 VAL A:143 A:142 63.0 0.406 E -82.1 127.4 63.0 0.406 0.0 HOH
3.138
N
O
6i8m 1 P26446 86.7 0.0 X-RAY
2019-05-01 VAL A:152 A:803 51.0 0.329 E -81.0 131.9 51.0 0.329 0.0 HOH
3.184
N
O
6i8t 1 P26446 86.7 0.0 X-RAY
2019-05-01 VAL A:152 A:803 55.0 0.355 E -78.5 125.7 55.0 0.355 0.0 HOH
3.323
CG1
O
1a26 1 P26446 86.67 0.0 X-RAY
1998-05-27 VAL A:150 A:803 56.0 0.361 E -84.6 132.6 56.0 0.361 0.0 HOH
4.006
CG1
O
1pax 1 P26446 86.67 0.0 X-RAY
1997-05-15 VAL A:150 A:803 57.0 0.368 E -80.3 126.8 57.0 0.368 0.0 HOH
9.372
N
O
2paw 1 P26446 86.67 0.0 X-RAY
1998-05-27 VAL A:150 A:803 54.0 0.348 E -92.0 124.9 54.0 0.348 0.0 HOH
9.485
N
O
2pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 VAL A:150 A:803 58.0 0.374 E -84.7 124.2 58.0 0.374 0.0 HOH
9.350
N
O
3pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 VAL A:150 A:803 59.0 0.381 E -81.9 129.6 59.0 0.381 0.0
4pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 VAL A:150 A:803 59.0 0.381 E -84.3 123.3 59.0 0.381 0.0
1efy 1 P26446 86.86 0.0 X-RAY
2001-01-17 VAL A:142 A:803 58.0 0.374 E -75.8 133.1 58.0 0.374 0.0 HOH
3.336
O
O
6m3i 2 P09874 100.0 3e-162 X-RAY
2021-03-03 VAL B:42 B:803 63.0 0.406 E -81.4 127.5 63.0 0.406 0.0 HOH
2.905
N
O
5ds3 1 P09874 100.0 5e-160 X-RAY
2016-07-27 VAL A:62 A:803 59.0 0.381 E -78.6 124.2 59.0 0.381 0.0 HOH
3.631
CG1
O
6bhv 1 P09874 100.0 5e-160 X-RAY
2018-02-28 VAL A:62 A:803 47.0 0.303 E -86.6 126.0 47.0 0.303 0.0 HOH
6.963
N
O
VAL B:62 B:803 57.0 0.368 E -87.1 125.6 NA NA NA
VAL C:62 C:803 41.0 0.265 E -86.6 126.6 NA NA NA
VAL D:62 D:803 63.0 0.406 E -84.9 126.1 NA NA NA
6nrf 1 P09874 100.0 5e-160 X-RAY
2019-08-14 VAL A:62 A:803 61.0 0.394 E -71.4 124.4 61.0 0.394 0.0 HOH
2.737
N
O
6nrg 1 P09874 100.0 5e-160 X-RAY
2019-08-14 VAL A:62 A:803 57.0 0.368 E -73.8 129.1 57.0 0.368 0.0 HOH
2.827
N
O
6nrh 1 P09874 100.0 5e-160 X-RAY
2019-08-14 VAL A:62 A:803 55.0 0.355 E -75.8 130.3 55.0 0.355 0.0 HOH
2.843
N
O
6nri 1 P09874 100.0 5e-160 X-RAY
2019-08-14 VAL A:62 A:803 61.0 0.394 E -69.9 129.7 61.0 0.394 0.0 HOH
2.959
N
O
6nrj 1 P09874 100.0 5e-160 X-RAY
2019-08-14 VAL A:62 A:803 53.0 0.342 E -75.6 130.6 53.0 0.342 0.0 HOH
2.789
N
O
6ntu 1 P09874 100.0 5e-160 X-RAY
2020-02-05 VAL A:62 A:803 51.0 0.329 E -82.8 126.9 51.0 0.329 0.0 HOH
2.810
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 VAL A:803 A:803 56.0 0.361 E -77.6 122.6