Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226556006 . C A CCDS1554.1:NM_001618.3:c.2171aGc>aTc_NP_001609.2:p.724S>I Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4opx 2 P09874 100.0 0.0 X-RAY
2014-07-02 SER B:207 C:724 34.0 0.296 -72.8 173.3 34.0 0.296 0.0
SER D:207 F:724 33.0 0.287 -72.8 173.2 NA NA NA
4oqa 2 P09874 100.0 0.0 X-RAY
2014-07-02 SER B:207 C:724 35.0 0.304 -75.0 174.5 35.0 0.304 0.0
SER D:207 F:724 35.0 0.304 -74.9 174.5 NA NA NA
4oqb 2 P09874 100.0 0.0 X-RAY
2014-07-02 SER B:207 C:724 34.0 0.296 -75.6 174.9 34.0 0.296 0.0
SER D:207 F:724 34.0 0.296 -75.5 175.0 NA NA NA
4dqy 3 P09874 99.8 0.0 X-RAY
2012-05-30 SER C:208 C:724 35.0 0.304 -72.1 175.1 35.0 0.304 0.0
SER F:208 F:724 35.0 0.304 -72.7 174.2 NA NA NA
4zzz 1 P09874 100.0 0.0 X-RAY
2015-08-12 SER A:72 A:724 58.0 0.504 -60.3 171.8 58.0 0.504 0.0 SO4
HOH
9.260
5.840
N
O
O2
O
SER B:72 B:724 36.0 0.313 -55.3 165.5 36.0 0.313 0.0 SO4
HOH
8.609
4.957
N
O
O4
O
5a00 1 P09874 100.0 0.0 X-RAY
2015-08-12 SER A:72 A:724 31.0 0.27 -81.0 170.2 31.0 0.27 0.0
4xhu 1 P09874 99.44 0.0 X-RAY
2015-09-30 SER A:69 C:724 63.0 0.548 360.0 141.9 63.0 0.548 0.0 HOH
8.260
OG
O
SER C:69 NA:NA DO NA DO DO DO NA NA NA
6xvw 1 P09874 100.0 0.0 X-RAY
2020-06-03 SER A:64 A:724 47.0 0.409 -133.3 166.3 47.0 0.409 0.0 HOH
8.297
CB
O
SER B:64 B:724 76.0 0.661 37.8 63.2 NA NA NA
7kk2 1 P09874 99.72 0.0 X-RAY
2021-01-06 SER A:65 A:724 43.0 0.374 -76.4 145.7 43.0 0.374 0.0 HOH
6.694
OG
O
SER B:65 B:724 102.0 0.887 S -124.9 40.1 NA NA NA
7kk3 1 P09874 99.72 0.0 X-RAY
2021-01-06 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 B:724 130.0 1.0 40.4 60.6 NA NA NA
SER C:65 C:724 29.0 0.252 -64.8 156.2 NA NA NA
SER D:65 NA:NA DO NA DO DO DO NA NA NA
7kk4 1 P09874 99.72 0.0 X-RAY
2021-01-06 SER A:65 A:724 43.0 0.374 -131.8 151.1 43.0 0.374 0.0 HOH
4.075
CB
O
SER B:65 B:724 39.0 0.339 -74.0 158.0 NA NA NA
7kk5 1 P09874 99.72 0.0 X-RAY
2021-01-06 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 B:724 137.0 1.0 S 49.6 42.2 NA NA NA
SER C:65 C:724 28.0 0.243 -56.0 157.2 NA NA NA
SER D:65 NA:NA DO NA DO DO DO NA NA NA
7kk6 1 P09874 99.72 0.0 X-RAY
2021-01-06 SER A:65 A:724 47.0 0.409 -81.9 157.9 47.0 0.409 0.0 HOH
9.077
O
O
SER B:65 B:724 135.0 1.0 S 57.7 36.6 NA NA NA
7aaa 1 P09874 99.43 0.0 X-RAY
2021-01-13 SER A:65 A:724 38.0 0.33 -70.0 146.1 38.0 0.33 0.0 HOH
4.209
OG
O
SER B:65 B:724 37.0 0.322 -77.8 162.8 NA NA NA
7aab 1 P09874 99.43 0.0 X-RAY
2021-01-13 SER A:65 A:724 38.0 0.33 -64.6 157.2 38.0 0.33 0.0 HOH
3.051
O
O
SER B:65 B:724 42.0 0.365 -65.8 158.4 NA NA NA
7aac 1 P09874 99.43 0.0 X-RAY
2021-01-13 SER A:65 A:724 47.0 0.409 -73.5 150.4 47.0 0.409 0.0 HOH
6.349
N
O
SER B:65 B:724 134.0 1.0 S 52.4 40.5 NA NA NA
7aad 1 P09874 99.43 0.0 X-RAY
2021-01-13 SER A:65 A:724 52.0 0.452 -66.8 157.2 52.0 0.452 0.0
SER B:65 B:724 40.0 0.348 -70.3 171.4 NA NA NA
7onr 1 P09874 99.43 0.0 X-RAY
2021-09-15 SER A:65 A:724 34.0 0.296 -77.8 147.0 34.0 0.296 0.0 HOH
5.813
O
O
SER B:65 B:724 127.0 1.0 S 52.8 19.8 NA NA NA
7ons 1 P09874 99.43 0.0 X-RAY
2021-09-15 SER A:65 A:724 54.0 0.47 -70.6 152.6 54.0 0.47 0.0 HOH
3.449
O
O
SER B:65 B:724 45.0 0.391 -72.5 161.3 NA NA NA
7ont 1 P09874 99.43 0.0 X-RAY
2021-09-15 SER A:65 A:724 41.0 0.357 -73.7 142.1 41.0 0.357 0.0 HOH
5.040
OG
O
SER B:65 B:724 125.0 1.0 S 57.3 23.4 NA NA NA
5ha9 1 P09874 100.0 0.0 X-RAY
2016-03-09 SER A:64 A:63 118.0 1.0 -122.6 79.5 118.0 1.0 0.0 SO4
8.435
N
O2
SER B:64 B:63 42.0 0.365 -69.9 131.9 42.0 0.365 0.0
4hhy 1 P09874 99.43 0.0 X-RAY
2013-03-27 SER A:68 A:63 60.0 0.522 -58.7 153.3 NA NA NA
SER B:68 B:63 35.0 0.304 -64.2 172.6 NA NA NA
SER C:68 NA:NA DO NA DO DO DO NA NA NA
SER D:68 D:63 43.0 0.374 -73.4 161.1 NA NA NA
4hhz 1 P09874 99.43 0.0 X-RAY
2013-03-27 SER A:68 A:63 35.0 0.304 -58.7 158.8 NA NA NA
SER B:68 B:63 48.0 0.417 42.3 93.3 NA NA NA
SER C:68 C:63 57.0 0.496 96.2 92.6 57.0 0.496 0.0
SER D:68 NA:NA DO NA DO DO DO NA NA NA
5xsr 1 P09874 99.43 0.0 X-RAY
2018-04-25 SER A:68 A:63 41.0 0.357 -136.7 160.6 41.0 0.357 0.0 HOH
2.357
O
O
5xsu 1 P09874 99.43 0.0 X-RAY
2018-04-25 SER A:68 A:63 49.0 0.426 -64.4 161.8 49.0 0.426 0.0 HOH
5.617
OG
O
SER B:68 B:63 102.0 NA -90.8 158.0 NA NA NA
SER C:68 NA:NA DO NA DO DO DO NA NA NA
SER D:68 NA:NA DO NA DO DO DO NA NA NA
1uk0 1 P09874 100.0 0.0 X-RAY
2004-01-27 SER A:63 A:63 41.0 0.357 84.9 144.9 41.0 0.357 0.0 HOH
4.152
O
O
SER B:63 B:63 45.0 0.391 -56.0 170.9 NA NA NA
1uk1 1 P09874 100.0 0.0 X-RAY
2004-09-14 SER A:63 A:724 40.0 0.348 69.9 149.7 40.0 0.348 0.0 HOH
5.011
OG
O
SER B:63 B:724 43.0 0.374 -78.7 166.0 NA NA NA
1wok 1 P09874 100.0 0.0 X-RAY
2005-03-15 SER A:63 A:724 72.0 0.626 171.5 -74.1 65.0 0.565 0.061 C:P09874:0.061
SER B:63 B:724 56.0 0.487 -58.0 -120.9 39.0 0.339 0.148 D:P09874:0.148
SER C:63 C:724 50.0 0.435 -136.2 -156.3 27.0 0.235 0.2 A:P09874:0.2
SER D:63 D:724 32.0 0.278 -123.8 150.4 26.0 0.226 0.052 B:P09874:0.052
2rcw 1 P09874 100.0 0.0 X-RAY
2008-09-23 SER A:63 A:63 39.0 0.339 -51.9 -20.1 39.0 0.339 0.0 HOH
3.700
O
O
6vkk 1 P09874 99.72 0.0 X-RAY
2020-06-17 SER A:85 A:724 34.0 0.296 -64.2 163.1 34.0 0.296 0.0
SER B:85 D:724 26.0 0.226 -63.9 163.9 NA NA NA
SER C:85 C:724 25.0 0.217 -65.7 162.7 NA NA NA
SER D:85 B:724 33.0 0.287 -64.3 162.8 NA NA NA
6vko 1 P09874 99.72 0.0 X-RAY
2020-06-17 SER A:85 A:724 19.0 0.165 -49.8 -35.0 19.0 0.165 0.0
SER B:85 B:724 21.0 0.183 -49.7 -34.6 NA NA NA
SER C:85 C:724 21.0 0.183 -50.3 -34.6 NA NA NA
SER D:85 D:724 19.0 0.165 -49.9 -34.5 NA NA NA
6vkq 1 P09874 99.72 0.0 X-RAY
2020-06-17 SER A:85 A:724 8.0 0.07 -58.3 -24.8 8.0 0.07 0.0
SER B:85 B:724 8.0 0.07 -57.9 -24.8 NA NA NA
SER C:85 C:724 9.0 0.078 -58.2 -24.6 NA NA NA
SER D:85 D:724 10.0 0.087 -58.4 -24.7 NA NA NA
4gv7 1 P09874 99.43 0.0 X-RAY
2013-06-19 SER A:64 A:724 42.0 0.365 -99.5 178.6 42.0 0.365 0.0
SER B:64 B:724 29.0 0.252 -97.4 159.7 NA NA NA
SER C:64 C:724 50.0 0.435 -74.7 172.3 NA NA NA
SER D:64 D:724 47.0 0.409 -79.2 156.6 NA NA NA
4r5w 1 P09874 99.43 0.0 X-RAY
2015-09-02 SER A:64 A:724 46.0 0.4 -82.3 162.5 46.0 0.4 0.0
SER B:64 B:724 41.0 0.357 -82.3 163.3 NA NA NA
4r6e 1 P09874 99.43 0.0 X-RAY
2015-09-09 SER A:64 A:724 32.0 0.278 -66.6 161.3 32.0 0.278 0.0 HOH
5.649
OG
O
SER B:64 B:724 42.0 0.365 -67.4 160.6 NA NA NA
SER C:64 C:724 42.0 0.365 -66.1 162.0 NA NA NA
SER D:64 D:724 42.0 0.365 -66.8 161.4 NA NA NA
6ghk 1 P09874 99.43 0.0 X-RAY
2019-05-22 SER A:64 A:724 27.0 0.235 -75.3 156.7 27.0 0.235 0.0
SER B:64 B:724 25.0 0.217 -72.4 161.9 NA NA NA
4pjt 1 P09874 100.0 0.0 X-RAY
2014-09-24 SER A:83 NA:NA DO NA DO DO DO NA NA NA
SER B:83 NA:NA DO NA DO DO DO NA NA NA
SER C:83 C:724 45.0 0.391 -79.0 165.3 NA NA NA
SER D:83 NA:NA DO NA DO DO DO NA NA NA
4rv6 1 P09874 99.71 0.0 X-RAY
2015-12-09 SER A:65 A:724 31.0 0.27 -65.9 166.9 31.0 0.27 0.0
SER B:65 B:724 41.0 0.357 -67.0 164.2 NA NA NA
SER C:65 C:724 39.0 0.339 -65.1 165.7 NA NA NA
SER D:65 D:724 30.0 0.261 -64.4 165.7 NA NA NA
4uxb 1 P09874 99.71 0.0 X-RAY
2015-09-02 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 B:724 52.0 0.452 -59.4 166.8 NA NA NA
4l6s 1 P09874 99.71 0.0 X-RAY
2013-08-07 SER A:66 NA:NA DO NA DO DO DO NA NA NA
SER B:66 B:724 133.0 1.0 S 58.8 21.1 NA NA NA
4und 1 P09874 99.71 0.0 X-RAY
2015-06-17 SER A:86 A:724 73.0 0.635 -127.6 166.9 73.0 0.635 0.0
SER B:86 B:724 71.0 0.617 -163.4 -175.3 NA NA NA
5kpn 1 P09874 99.71 0.0 X-RAY
2016-12-21 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5kpo 1 P09874 99.71 0.0 X-RAY
2016-12-21 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5wrq 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5wry 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 B:724 132.0 1.0 S 57.5 35.4 NA NA NA
5wrz 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5ws0 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5ws1 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
5wtc 1 P09874 99.71 0.0 X-RAY
2017-01-25 SER A:65 NA:NA DO NA DO DO DO NA NA NA
SER B:65 NA:NA DO NA DO DO DO NA NA NA
2rd6 1 P09874 99.71 0.0 X-RAY
2008-09-23 SER A:63 A:63 31.0 0.27 -41.1 138.3 31.0 0.27 0.0 HOH
3.314
O
O
3gjw 1 P09874 99.71 0.0 X-RAY
2010-03-09 SER A:63 A:63 27.0 0.235 -54.3 154.8 27.0 0.235 0.0 HOH
6.776
O
O
3gn7 1 P09874 99.71 0.0 X-RAY
2010-03-16 SER A:63 A:63 31.0 0.27 -41.8 161.9 31.0 0.27 0.0 HOH
3.727
O
O
3l3l 1 P09874 99.71 0.0 X-RAY
2010-12-22 SER A:63 A:63 26.0 0.226 -56.2 137.3 26.0 0.226 0.0 HOH
4.089
CB
O
3l3m 1 P09874 99.71 0.0 X-RAY
2010-06-23 SER A:63 A:63 30.0 0.261 -45.8 134.7 30.0 0.261 0.0 HOH
4.216
O
O
5kpp 1 P09874 99.71 0.0 X-RAY
2016-11-30 SER A:63 NA:NA DO NA DO DO DO NA NA NA
SER B:63 NA:NA DO NA DO DO DO NA NA NA
5kpq 1 P09874 99.71 0.0 X-RAY
2016-12-14 SER A:63 NA:NA DO NA DO DO DO NA NA NA
SER B:63 NA:NA DO NA DO DO DO NA NA NA
7cmw 1 P09874 99.71 0.0 X-RAY
2020-12-16 SER A:67 A:724 43.0 0.374 -90.2 170.3 43.0 0.374 0.0
SER B:67 B:724 38.0 0.33 -87.0 162.2 NA NA NA
5xst 1 P09874 99.43 0.0 X-RAY
2018-04-25 SER A:64 A:63 47.0 NA -49.1 99.7 47.0 NA NA
6i8m 1 P26446 86.7 0.0 X-RAY
2019-05-01 GLY A:73 A:724 25.0 0.333 -57.6 168.7 25.0 0.333 0.0 HOH
6.941
CA
O
6i8t 1 P26446 86.7 0.0 X-RAY
2019-05-01 GLY A:73 A:724 34.0 0.453 -64.7 172.9 34.0 0.453 0.0 HOH
7.080
CA
O
1a26 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:71 A:724 29.0 0.387 -76.8 170.9 29.0 0.387 0.0 HOH
2.665
O
O
1pax 1 P26446 86.67 0.0 X-RAY
1997-05-15 GLY A:71 A:724 28.0 0.373 -75.4 165.2 28.0 0.373 0.0 HOH
6.262
C
O
2paw 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:71 A:724 28.0 0.373 -76.1 161.5 28.0 0.373 0.0 HOH
3.165
O
O
2pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:71 A:724 28.0 0.373 -72.2 168.3 28.0 0.373 0.0 HOH
6.173
C
O
3pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:71 A:724 28.0 0.373 -74.3 170.5 28.0 0.373 0.0 HOH
6.392
C
O
4pax 1 P26446 86.67 0.0 X-RAY
1998-05-27 GLY A:71 A:724 28.0 0.373 -77.6 162.6 28.0 0.373 0.0 HOH
9.067
N
O
1efy 1 P26446 86.86 0.0 X-RAY
2001-01-17 GLY A:63 A:724 24.0 0.32 -78.8 167.9 24.0 0.32 0.0 HOH
6.129
C
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 SER A:724 A:724 23.0 0.2 -58.6 160.8