Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 226568894 | . | T | A | CCDS1554.1:NM_001618.3:c.1175aAc>aTc_NP_001609.2:p.392N>I | Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7scy | 7 | P09874 | 96.46 | 1e-62 |
EM |
2022-01-12 | ASN | K:29 | K:392 | 91.0 | 0.569 | S | 55.3 | 27.5 | 84.0 | 0.525 | 0.044 |
I:Q08AJ9:0.044 |
DA DT DA DA |
8.806 6.373 6.995 9.856 |
HD22 HD22 HD22 O |
O3' OP1 OP2 OP1 |
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7scz | 7 | P09874 | 96.46 | 1e-62 |
EM |
2022-01-19 | ASN | K:29 | K:392 | 146.0 | 0.912 | T | -112.8 | -1.7 | 146.0 | 0.912 | 0.0 |
DA |
9.514 |
HD22 |
OP1 |
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2le0 | 1 | P27008 | 87.88 | 3e-50 |
NMR |
2011-10-19 | ASN | A:6 | A:6 | 138.0 | 0.863 | T | -100.5 | 8.0 | 138.0 | 0.863 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p09874-f1 | 1 | P09874 | 100.0 | 0.0 | ASN | A:392 | A:392 | 166.0 | 1.0 | T | 67.1 | 3.7 |