Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 226578166 . C A CCDS1554.1:NM_001618.3:c.562Gct>Tct_NP_001609.2:p.188A>S Homo sapiens poly(ADP-ribose) polymerase 1 (PARP1), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2n8a 1 P09874 100.0 1e-152 NMR
 2015-12-02 ALA A:188 A:188 53.0 0.461 -60.6 150.1 53.0 0.461 0.0
4av1 1 P09874 98.02 1e-140 X-RAY
 2012-06-13 ALA A:209 NA:NA DO NA DO DO DO NA NA NA
ALA B:209 B:188 38.0 0.33 -78.0 163.1 38.0 0.33 0.0 HOH
 8.537
 N
 O
ALA C:209 NA:NA DO NA DO DO DO NA NA NA
ALA D:209 D:188 39.0 0.339 -78.0 163.0 39.0 0.339 0.0 HOH
 7.881
 O
 O
2l31 1 P09874 100.0 1e-71 NMR
 2011-02-02 ALA A:86 A:188 33.0 0.287 -63.9 149.1 33.0 0.287 0.0
3odc 1 P09874 100.0 8e-65 X-RAY
 2011-01-12 ALA A:85 A:188 46.0 0.4 -53.6 149.3 46.0 0.4 0.0 HOH
 3.542
 CB
 O
ALA B:85 B:188 48.0 0.417 -51.7 146.0 NA NA NA
3ode 1 P09874 100.0 8e-65 X-RAY
 2011-01-12 ALA A:85 A:188 43.0 0.374 -49.3 145.8 43.0 0.374 0.0
ALA B:85 B:188 42.0 0.365 -49.5 145.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p09874-f1 1 P09874 100.0 0.0 ALA A:188 A:188 38.0 0.33 -61.7 160.0