Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 229438621 | . | C | A | CCDS31050.1:NM_004578.3:c.554cCa>cAa_NP_004569.2:p.185P>Q | Homo sapiens RAB4A, member RAS oncogene family (RAB4A), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2bmd | 1 | P20338 | 100.0 | 1e-136 |
X-RAY |
2005-04-25 | PRO | A:182 | A:182 | 61.0 | 0.421 | T | -75.2 | -12.9 | 61.0 | 0.421 | 0.0 |
HOH |
3.116 |
O |
O |
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| 2bme | 1 | P20338 | 100.0 | 1e-136 |
X-RAY |
2005-04-25 | PRO | A:182 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| PRO | B:182 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| PRO | C:182 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| PRO | D:182 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 2o52 | 1 | P61018 | 89.33 | 4e-118 |
X-RAY |
2006-12-19 | PRO | A:197 | A:180 | 70.0 | 0.483 | G | -66.6 | -25.0 | 70.0 | 0.483 | 0.0 |
HOH |
5.603 |
N |
O |
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| PRO | B:197 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p20338-f1 | 1 | P20338 | 100.0 | 2e-165 | PRO | A:185 | A:185 | 10.0 | 0.069 | T | -53.3 | -35.7 | |
| af-p61018-f1 | 1 | P61018 | 87.32 | 1e-141 | PRO | A:180 | A:180 | 11.0 | 0.076 | T | -57.8 | -25.0 | |