Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 24122731 | . | G | A | CCDS242.1:NM_000403.3:c.898Cgg>Tgg_NP_000394.2:p.300R>W | Homo sapiens UDP-galactose-4-epimerase (GALE), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ek5 | 1 | Q14376 | 100.0 | 0.0 |
X-RAY |
2000-05-17 | ARG | A:300 | A:300 | 123.0 | 0.547 | -72.8 | 138.2 | 123.0 | 0.547 | 0.0 |
HOH |
2.646 |
N |
O |
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1ek6 | 1 | Q14376 | 100.0 | 0.0 |
X-RAY |
2000-05-17 | ARG | A:300 | A:300 | 102.0 | 0.453 | -94.9 | 135.8 | 102.0 | 0.453 | 0.0 |
NAI UPG HOH |
9.974 2.937 2.755 |
NH2 NH2 N |
O7N O2A O |
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ARG | B:300 | B:300 | 73.0 | 0.324 | -96.9 | 126.1 | 73.0 | 0.324 | 0.0 |
NAI UPG HOH |
9.476 2.893 2.699 |
NH2 NH2 N |
O7N O1B O |
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1hzj | 1 | Q14376 | 99.71 | 0.0 |
X-RAY |
2001-05-09 | ARG | A:300 | A:300 | 104.0 | 0.462 | -89.1 | 134.9 | 104.0 | 0.462 | 0.0 |
UD1 HOH |
2.851 2.739 |
NH2 N |
O1A O |
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ARG | B:300 | B:300 | 72.0 | 0.32 | -96.4 | 130.3 | 72.0 | 0.32 | 0.0 |
NAD UD1 HOH |
9.989 2.845 2.699 |
NH2 NH2 N |
O7N O1A O |
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1i3k | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | ARG | A:300 | A:300 | 104.0 | 0.462 | -100.4 | 127.0 | 104.0 | 0.462 | 0.0 |
UPG HOH |
2.712 2.857 |
NH2 N |
O2A O |
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ARG | B:300 | B:300 | 98.0 | 0.436 | -89.7 | 139.6 | 98.0 | 0.436 | 0.0 |
UPG HOH |
2.838 2.880 |
NH2 N |
O2A O |
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1i3l | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | ARG | A:300 | A:300 | 102.0 | 0.453 | -94.5 | 125.9 | 102.0 | 0.453 | 0.0 |
GDU HOH |
2.683 2.815 |
NH2 N |
O2A O |
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ARG | B:300 | B:300 | 94.0 | 0.418 | -89.8 | 130.1 | 94.0 | 0.418 | 0.0 |
GDU HOH |
2.834 2.913 |
NH2 N |
O2A O |
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1i3m | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | ARG | A:300 | A:300 | 107.0 | 0.476 | -93.1 | 133.4 | 107.0 | 0.476 | 0.0 |
UD1 HOH |
2.866 2.746 |
NH2 N |
O1A O |
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ARG | B:300 | B:300 | 108.0 | 0.48 | -88.5 | 128.6 | 108.0 | 0.48 | 0.0 |
UD1 HOH |
2.598 2.866 |
NH2 N |
O2B O |
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1i3n | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | ARG | A:300 | A:300 | 107.0 | 0.476 | -93.9 | 130.5 | 107.0 | 0.476 | 0.0 |
UD1 HOH |
2.757 2.834 |
NH2 N |
O1A O |
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ARG | B:300 | B:300 | 109.0 | 0.484 | -86.7 | 136.6 | 109.0 | 0.484 | 0.0 |
UD1 HOH |
2.755 2.850 |
NH2 N |
O2B O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14376-f1 | 1 | Q14376 | 100.0 | 0.0 | ARG | A:300 | A:300 | 103.0 | 0.458 | -80.1 | 134.7 |