Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 24124678 | . | C | A | CCDS242.1:NM_000403.3:c.280Gtg>Ttg_NP_000394.2:p.94V>L | Homo sapiens UDP-galactose-4-epimerase (GALE), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ek5 | 1 | Q14376 | 100.0 | 0.0 |
X-RAY |
2000-05-17 | VAL | A:94 | A:94 | 46.0 | 0.297 | H | -50.2 | -47.1 | 46.0 | 0.297 | 0.0 |
NAD HOH |
7.096 3.401 |
CG2 N |
O7N O |
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1ek6 | 1 | Q14376 | 100.0 | 0.0 |
X-RAY |
2000-05-17 | VAL | A:94 | A:94 | 60.0 | 0.387 | H | -48.6 | -49.3 | 60.0 | 0.387 | 0.0 |
NAI UPG HOH |
8.189 4.994 3.021 |
CG2 CG2 N |
O2D O3' O |
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VAL | B:94 | B:94 | 22.0 | 0.142 | H | -54.7 | -55.6 | 22.0 | 0.142 | 0.0 |
NAI UPG HOH |
8.382 4.075 2.960 |
N CG2 N |
O2D O1B O |
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1hzj | 1 | Q14376 | 99.71 | 0.0 |
X-RAY |
2001-05-09 | VAL | A:94 | A:94 | 62.0 | 0.4 | H | -48.2 | -52.2 | 62.0 | 0.4 | 0.0 |
NAD UD1 HOH |
8.504 3.207 3.297 |
CG2 CG2 N |
O2D O3' O |
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VAL | B:94 | B:94 | 29.0 | 0.187 | H | -47.8 | -59.5 | 29.0 | 0.187 | 0.0 |
NAD UD1 HOH |
8.206 3.407 2.952 |
N CG2 N |
O2D O2B O |
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1i3k | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | MET | A:94 | A:94 | 87.0 | 0.47 | S | -95.4 | 30.8 | 87.0 | 0.47 | 0.0 |
NAD UPG HOH |
9.367 7.628 2.792 |
N N CB |
O2A O2' O |
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MET | B:94 | B:94 | 64.0 | 0.346 | S | -106.3 | 35.1 | 64.0 | 0.346 | 0.0 |
NAD UPG HOH |
5.276 7.608 3.600 |
CE N CE |
O2A O2' O |
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1i3l | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | MET | A:94 | A:94 | 92.0 | 0.497 | S | -97.5 | 36.4 | 92.0 | 0.497 | 0.0 |
GDU NAD HOH |
5.563 9.327 3.086 |
C N SD |
O4' O2A O |
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MET | B:94 | B:94 | 68.0 | 0.368 | S | -110.1 | 11.7 | 68.0 | 0.368 | 0.0 |
GDU NAD EDO HOH |
4.641 6.137 6.059 3.346 |
N CE O CE |
O4' O2A O2 O |
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1i3m | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | MET | A:94 | A:94 | 42.0 | 0.227 | S | -122.5 | 18.5 | 42.0 | 0.227 | 0.0 |
NAD UD1 HOH |
5.500 5.612 2.378 |
CE N O |
O2A O3' O |
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MET | B:94 | B:94 | 58.0 | 0.314 | S | -104.9 | 28.8 | 58.0 | 0.314 | 0.0 |
NAD UD1 HOH |
5.937 7.374 3.632 |
CE N SD |
O2A O3' O |
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1i3n | 1 | Q14376 | 99.43 | 0.0 |
X-RAY |
2001-06-20 | MET | A:94 | A:94 | 43.0 | 0.232 | S | -107.1 | 26.1 | 43.0 | 0.232 | 0.0 |
NAD UD1 HOH |
5.139 5.905 2.284 |
CE N O |
O2A C8' O |
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MET | B:94 | B:94 | 62.0 | 0.335 | S | -91.9 | 36.8 | 62.0 | 0.335 | 0.0 |
NAD UD1 HOH |
4.900 7.298 3.267 |
CE N CE |
O2A O3' O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q14376-f1 | 1 | Q14376 | 100.0 | 0.0 | VAL | A:94 | A:94 | 60.0 | 0.387 | H | -51.1 | -51.2 |