Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 36603427 . C A CCDS404.1:NM_014408.4:c.393ttG>ttT_NP_055223.1:p.131L>F Homo sapiens trafficking protein particle complex 3 (TRAPPC3), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cfh 1 O43617 100.0 2e-134 X-RAY
 2006-07-12 LEU A:145 A:131 14.0 0.082 H -64.7 -30.5 14.0 0.082 0.0 PLM
HOH
 3.481
8.008
 CD2
C
 CC
O
LEU B:145 B:131 14.0 0.082 H -64.4 -32.3 NA NA NA
1sz7 1 O43617 100.0 1e-133 X-RAY
 2005-01-18 LEU A:140 A:131 15.0 0.088 H -62.1 -33.2 6.0 0.035 0.053 A:O43617:0.053
 PLM
HOH
 3.685
7.199
 CD2
CD1
 CG
O
3kxc 1 O43617 99.44 2e-133 X-RAY
 2010-04-21 LEU A:145 A:131 15.0 0.088 H -61.5 -34.4 15.0 0.088 0.0 PLM
HOH
 3.465
7.255
 CD1
C
 CC
O
2pwn 1 O55013 98.33 3e-133 X-RAY
 2007-05-29 LEU A:143 A:131 17.0 0.1 H -61.2 -33.9 7.0 0.041 0.059 A:O55013:0.059
 MYR
HOH
 4.849
6.378
 CD2
O
 C14
O
2j3r 1 O55013 98.33 4e-133 X-RAY
 2006-11-27 LEU A:133 A:131 17.0 0.1 H -58.2 -32.3 17.0 0.1 0.0 PLM
 3.638
 CD2
 CD
2j3t 1 O55013 98.33 4e-133 X-RAY
 2006-11-22 LEU A:133 A:131 15.0 0.088 H -46.4 -53.8 15.0 0.088 0.0 PLM
HOH
 3.965
7.726
 CD2
O
 CD
O
2j3w 3 O55013 98.33 4e-133 X-RAY
 2006-11-27 LEU D:133 D:131 13.0 0.076 H -59.0 -42.0 13.0 0.076 0.0 PLM
HOH
 3.736
6.053
 CD2
CD1
 CD
O
LEU E:133 E:131 17.0 0.1 H -58.9 -42.6 NA NA NA
1wc8 1 O55013 98.33 5e-133 X-RAY
 2004-12-13 LEU A:131 A:131 15.0 0.088 H -62.6 -34.2 6.0 0.035 0.053 A:O55013:0.053
 MYR
HOH
 4.432
6.829
 CD2
CD1
 C14
O
1wc9 1 O55013 98.18 5e-121 X-RAY
 2004-12-13 LEU A:124 A:131 16.0 0.094 H -58.4 -35.3 6.0 0.035 0.059 A:O55013:0.059
 MYR
HOH
 5.172
7.038
 CD2
CD1
 C14
O
2c0j 1 O43617 98.14 1e-117 X-RAY
 2006-02-07 LEU A:117 A:131 14.0 0.082 H -57.6 -44.1 14.0 0.082 0.0 PLM
HOH
 3.934
7.125
 CD2
CB
 CF
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43617-f1 1 O43617 100.0 8e-135 LEU A:131 A:131 13.0 0.076 H -63.4 -40.0