Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 36603434 . T A CCDS404.1:NM_014408.4:c.386aAt>aTt_NP_055223.1:p.129N>I Homo sapiens trafficking protein particle complex 3 (TRAPPC3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cfh 1 O43617 100.0 2e-134 X-RAY
 2006-07-12 ASN A:143 A:129 18.0 0.113 H -64.4 -21.9 18.0 0.113 0.0 PLM
HOH
 7.807
3.750
 C
OD1
 CG
O
ASN B:143 B:129 18.0 0.113 H -65.7 -23.2 NA NA NA
1sz7 1 O43617 100.0 1e-133 X-RAY
 2005-01-18 ASN A:138 A:129 18.0 0.113 T -57.8 -21.5 18.0 0.113 0.0 PLM
HOH
 8.838
2.803
 O
OD1
 CG
O
3kxc 1 O43617 99.44 2e-133 X-RAY
 2010-04-21 ASN A:143 A:129 18.0 0.113 H -59.2 -21.8 18.0 0.113 0.0 PLM
HOH
 8.086
3.075
 C
ND2
 CG
O
2pwn 1 O55013 98.33 3e-133 X-RAY
 2007-05-29 ASN A:141 A:129 17.0 0.106 T -62.0 -18.7 17.0 0.106 0.0 HOH
 2.848
 OD1
 O
2j3r 1 O55013 98.33 4e-133 X-RAY
 2006-11-27 ASN A:131 A:129 18.0 0.113 T -48.8 -32.0 18.0 0.113 0.0 PLM
 9.568
 C
 CF
2j3t 1 O55013 98.33 4e-133 X-RAY
 2006-11-22 ASN A:131 A:129 23.0 0.144 H -57.5 -15.2 23.0 0.144 0.0 PLM
HOH
 8.880
3.725
 C
OD1
 CG
O
2j3w 3 O55013 98.33 4e-133 X-RAY
 2006-11-27 ASN D:131 D:129 14.0 0.087 T -48.6 -20.4 14.0 0.087 0.0 PLM
HOH
 9.551
2.704
 O
OD1
 CD
O
ASN E:131 E:129 15.0 0.094 T -57.6 -20.9 NA NA NA
1wc8 1 O55013 98.33 5e-133 X-RAY
 2004-12-13 ASN A:129 A:129 16.0 0.1 T -57.0 -22.6 16.0 0.1 0.0 HOH
 2.990
 ND2
 O
1wc9 1 O55013 98.18 5e-121 X-RAY
 2004-12-13 ASN A:122 A:129 17.0 0.106 T -52.0 -23.8 17.0 0.106 0.0 HOH
 2.858
 ND2
 O
2c0j 1 O43617 98.14 1e-117 X-RAY
 2006-02-07 ASN A:115 A:129 18.0 0.113 H -54.5 -17.3 18.0 0.113 0.0 PLM
HOH
 8.517
3.156
 C
OD1
 CG
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43617-f1 1 O43617 100.0 8e-135 ASN A:129 A:129 18.0 0.113 T -61.6 -18.0