Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 36603546 . T A CCDS404.1:NM_014408.4:c.274Agc>Tgc_NP_055223.1:p.92S>C Homo sapiens trafficking protein particle complex 3 (TRAPPC3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cfh 1 O43617 100.0 2e-134 X-RAY
 2006-07-12 SER A:106 A:92 61.0 0.53 E -86.0 153.0 61.0 0.53 0.0 HOH
 3.399
 CA
 O
SER B:106 B:92 63.0 0.548 E -87.8 155.7 NA NA NA
1sz7 1 O43617 100.0 1e-133 X-RAY
 2005-01-18 SER A:101 A:92 59.0 0.513 E -85.8 153.3 59.0 0.513 0.0 HOH
 2.541
 OG
 O
3kxc 1 O43617 99.44 2e-133 X-RAY
 2010-04-21 SER A:106 A:92 64.0 0.557 E -85.0 148.2 64.0 0.557 0.0 HOH
 3.683
 CA
 O
2pwn 1 O55013 98.33 3e-133 X-RAY
 2007-05-29 SER A:104 A:92 76.0 0.661 E -82.3 150.7 76.0 0.661 0.0 HOH
 2.793
 OG
 O
2j3r 1 O55013 98.33 4e-133 X-RAY
 2006-11-27 SER A:94 A:92 67.0 0.583 E -97.3 134.6 67.0 0.583 0.0 HOH
 9.711
 O
 O
2j3t 1 O55013 98.33 4e-133 X-RAY
 2006-11-22 SER A:94 A:92 70.0 0.609 E -95.7 139.6 70.0 0.609 0.0 HOH
 2.879
 OG
 O
2j3w 3 O55013 98.33 4e-133 X-RAY
 2006-11-27 SER D:94 D:92 74.0 0.643 E -94.4 125.9 74.0 0.643 0.0 HOH
 3.653
 CA
 O
SER E:94 E:92 61.0 0.53 E -105.6 127.2 NA NA NA
1wc8 1 O55013 98.33 5e-133 X-RAY
 2004-12-13 SER A:92 A:92 56.0 0.487 E -94.6 149.8 56.0 0.487 0.0 HOH
 3.960
 CA
 O
1wc9 1 O55013 98.18 5e-121 X-RAY
 2004-12-13 SER A:85 A:92 58.0 0.504 E -91.8 153.8 58.0 0.504 0.0 HOH
 2.644
 OG
 O
2c0j 1 O43617 98.14 1e-117 X-RAY
 2006-02-07 SER A:78 A:92 71.0 0.617 E -86.6 149.5 71.0 0.617 0.0 HOH
 6.835
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43617-f1 1 O43617 100.0 8e-135 SER A:92 A:92 54.0 0.47 E -83.8 137.5