Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40539750 . T A CCDS447.1:NM_000310.3:c.904Ata>Tta_NP_000301.1:p.302I>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 ILE A:282 A:302 26.0 0.149 G -56.9 -38.2 26.0 0.149 0.0
ILE B:282 B:302 29.0 0.166 G -47.9 -40.8 29.0 0.166 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 ILE A:275 A:302 8.0 0.046 H -44.6 -45.5 8.0 0.046 0.0
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 ILE A:275 A:302 9.0 0.051 G -48.8 -41.8 9.0 0.051 0.0 HOH
6.214
O
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 ILE A:275 A:302 5.0 0.029 S -46.3 -37.9 5.0 0.029 0.0 HOH
7.050
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ILE A:302 A:302 24.0 0.137 G -52.8 -38.2