Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40539768 . A C CCDS447.1:NM_000310.3:c.886Tgg>Ggg_NP_000301.1:p.296W>G Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 TRP A:276 A:296 37.0 0.145 H -63.6 -46.9 37.0 0.145 0.0 HOH
 9.463
 CH2
 O
TRP B:276 B:296 38.0 0.149 H -65.2 -38.6 38.0 0.149 0.0 HOH
 9.781
 CH2
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TRP A:269 A:296 46.0 0.18 H -48.4 -46.9 46.0 0.18 0.0 HOH
 9.450
 CH2
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TRP A:269 A:296 36.0 0.141 H -67.5 -43.2 36.0 0.141 0.0 HOH
 2.817
 NE1
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 TRP A:269 A:296 34.0 0.133 H -52.0 -44.5 34.0 0.133 0.0 HOH
 9.820
 CH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 TRP A:296 A:296 34.0 0.133 H -64.5 -43.4