Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40539800 . G A CCDS447.1:NM_000310.3:c.854aCa>aTa_NP_000301.1:p.285T>I Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 THR A:265 A:285 16.0 0.114 E -130.2 153.8 16.0 0.114 0.0 HOH
 9.893
 N
 O
THR B:265 B:285 19.0 0.136 E -136.0 153.3 19.0 0.136 0.0 HOH
 9.845
 CG2
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 LEU A:258 A:285 18.0 0.106 E -144.1 162.9 18.0 0.106 0.0 NAG
NAG
HOH
 6.530
8.008
7.320
 O
O
N
 C5
C1
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 LEU A:258 A:285 19.0 0.112 E -163.7 153.2 19.0 0.112 0.0 NAG
NAG
HOH
 6.665
8.464
4.047
 O
O
CB
 C5
C1
O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 LEU A:258 A:285 18.0 0.106 E -159.9 141.1 18.0 0.106 0.0 NAG
NAG
HOH
 7.029
9.121
9.160
 C
C
CD2
 C8
C1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 THR A:285 A:285 17.0 0.121 E -137.4 146.8