Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40539807 . G A CCDS447.1:NM_000310.3:c.847Ctg>Ttg_NP_000301.1:p.283L>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 LEU A:263 A:283 30.0 0.176 E -103.6 143.5 30.0 0.176 0.0 HOH
6.746
O
O
LEU B:263 B:283 28.0 0.165 E -116.4 140.8 28.0 0.165 0.0 HOH
7.059
O
O
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 LEU A:256 A:283 30.0 0.176 E -108.2 150.7 30.0 0.176 0.0 HOH
5.220
N
O
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 LEU A:256 A:283 35.0 0.206 E -109.0 149.3 35.0 0.206 0.0 HOH
4.100
CA
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 LEU A:256 A:283 31.0 0.182 E -101.1 145.6 31.0 0.182 0.0 HOH
6.762
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 LEU A:283 A:283 31.0 0.182 E -104.5 144.4