Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40539851 . C A CCDS447.1:NM_000310.3:c.803cGc>cTc_NP_000301.1:p.268R>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 ARG A:248 A:268 21.0 0.093 S -67.7 -26.2 21.0 0.093 0.0 HOH
 6.087
 NH1
 O
ARG B:248 B:268 22.0 0.098 S -72.6 -23.5 22.0 0.098 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ARG A:241 A:268 49.0 0.218 S -71.4 -16.8 49.0 0.218 0.0 NAG
HOH
 9.171
3.468
 O
N
 O5
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ARG A:241 A:268 57.0 0.253 S -61.6 -20.7 57.0 0.253 0.0 NAG
HOH
 9.932
2.698
 O
NH1
 C8
O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 ARG A:241 A:268 24.0 0.107 S -70.6 -11.4 24.0 0.107 0.0 HOH
 3.388
 NH2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ARG A:268 A:268 55.0 0.244 T -66.4 -22.2