Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40542571 . G A CCDS447.1:NM_000310.3:c.741taC>taT_NP_000301.1:p.247Y>Y Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 TYR A:227 A:247 32.0 0.139 E -54.0 134.3 32.0 0.139 0.0 UNX
HOH
 9.729
8.983
 OH
O
 UNK
O
TYR B:227 B:247 34.0 0.148 E -53.7 142.6 34.0 0.148 0.0 HOH
 8.518
 CE2
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TYR A:220 A:247 13.0 0.057 E -62.3 144.5 13.0 0.057 0.0 HOH
 3.623
 OH
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TYR A:220 A:247 17.0 0.074 E -60.5 142.4 17.0 0.074 0.0 HOH
 3.128
 O
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 TYR A:220 A:247 14.0 0.061 E -56.9 138.7 14.0 0.061 0.0 HOH
 5.387
 OH
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 TYR A:247 A:247 35.0 0.152 E -56.8 138.3