Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 40542572 | . | T | A | CCDS447.1:NM_000310.3:c.740tAc>tTc_NP_000301.1:p.247Y>F | Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3gro | 1 | P50897 | 99.65 | 0.0 |
X-RAY |
2009-04-07 | TYR | A:227 | A:247 | 32.0 | 0.139 | E | -54.0 | 134.3 | 32.0 | 0.139 | 0.0 |
UNX HOH |
9.729 8.983 |
OH O |
UNK O |
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TYR | B:227 | B:247 | 34.0 | 0.148 | E | -53.7 | 142.6 | 34.0 | 0.148 | 0.0 |
HOH |
8.518 |
CE2 |
O |
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1eh5 | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-04-26 | TYR | A:220 | A:247 | 13.0 | 0.057 | E | -62.3 | 144.5 | 13.0 | 0.057 | 0.0 |
HOH |
3.623 |
OH |
O |
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1ei9 | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-04-26 | TYR | A:220 | A:247 | 17.0 | 0.074 | E | -60.5 | 142.4 | 17.0 | 0.074 | 0.0 |
HOH |
3.128 |
O |
O |
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1exw | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-08-02 | TYR | A:220 | A:247 | 14.0 | 0.061 | E | -56.9 | 138.7 | 14.0 | 0.061 | 0.0 |
HOH |
5.387 |
OH |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p50897-f1 | 1 | P50897 | 100.0 | 0.0 | TYR | A:247 | A:247 | 35.0 | 0.152 | E | -56.8 | 138.3 |